ID: uc010jau.2_intron_6_0_chr5_82818129_f.5p
GENE: VCAN(7)
chr5:82818079-82818328+


(5)
BREAST
(6)
HEART
(2)
OTHER
(6)
SKIN

Sense strand
TCACCCTGACATTAATGTTTATATTATTGAGGTCAGAGAAAATAAGACAGGTAAGTCTTTGCTTTCTAGACTAGCATTGAAGGCAATCCTCATTTTATCTTGAAAGTTACTTTTGGGGAAAAAAAGTCAACATACCAAATGCTGCTATTAGAAGATAACTGGAGTGTGAAAAATAAATGTTTTAGCTTCATATATTTGTACAAGAATTGGAAGAATATGTTAAACAATGTGGAAGAATGTTAGATACAAT
..............................................................................................................................((.((((.(((....((.........)).....))).)))))).................................................................................
.........................................................................................................................122...............................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189785TAX577739(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..............................................................................................................................TCAACATACCAAATGCTGCTATTAG...................................................................................................25126.0026.0018.003.005.00--------------------
..............................................................................................................................TCAACATACCAAATGCTGCTAT......................................................................................................22110.0010.009.001.00---------------------
..............................................................................................................................TCAACATACCAAATGCTGCTATT.....................................................................................................2319.009.008.001.00---------------------
..............................................................................................................................TCAACATACCAAATGCTGCTATTA....................................................................................................2415.005.004.001.00---------------------
..........................TTGAGGTCAGAGAAAATAAGAC..........................................................................................................................................................................................................2213.003.00---3.00-------------------
..............................................................................................................................TCAACATACCAAATGCTGCTACTAG...................................................................................................253.000.00-3.00---------------------
...............................................................................................................................CAACATACCAAATGCTGCTATT.....................................................................................................2212.002.00-2.00---------------------
...............................................................................................................................................................TGGAGTGTGAAAAATAAATGTTTTA..................................................................2512.002.00----2.00------------------
.................................CAGAGAAAATAAGACAGGTC.....................................................................................................................................................................................................201.000.00-------1.00---------------
..............................................................................................................................TCAACATACCAAATGCTGCTATCAG...................................................................................................2511.0010.00----------1.00------------
.................................................................................................................................ACATACCAAATGCTGCTATTAG...................................................................................................2211.001.001.00----------------------
........................TATTGAGGTCAGAGAAAATAAGACA.........................................................................................................................................................................................................2511.001.00-----1.00-----------------
..............................................................................................................................TCAACATACCAAATGCTGCTATC.....................................................................................................2311.0010.00-1.00---------------------
.......................TTATTGAGGTCAGAGAAAATAAGA...........................................................................................................................................................................................................2411.001.00---------1.00-------------
...............TGTTTATATTATTGAGGTCAGAGAA..................................................................................................................................................................................................................2511.001.00------------1.00----------
.......................................................................................................................................................................................................................TATGTTAAACAATGTGGAAGAT.............221.000.00-----------1.00-----------
...............................................................................................................................................GCTATTAGAAGATAACTGGAG......................................................................................2111.001.00--------1.00--------------
..............................................................................................................................TCAACATACCAAATGCTGCTAGA.....................................................................................................231.000.00-1.00---------------------
......................................................................................................................................................GAAGATAACTGGAGTGGTAC................................................................................201.000.00-------------1.00---------
.........................................................................................................................................AATGCTGCTATTAGAAGATAACTGG........................................................................................2511.001.00------1.00----------------
....................................................................................................................................................TAGAAGATAACTGGAG......................................................................................1640.500.50--------------0.50--------
...................................................................................................................................................................................................................................TGTGGAAGAATGTTAGA......1720.500.50-----0.50-----------------

Antisense strand
TCACCCTGACATTAATGTTTATATTATTGAGGTCAGAGAAAATAAGACAGGTAAGTCTTTGCTTTCTAGACTAGCATTGAAGGCAATCCTCATTTTATCTTGAAAGTTACTTTTGGGGAAAAAAAGTCAACATACCAAATGCTGCTATTAGAAGATAACTGGAGTGTGAAAAATAAATGTTTTAGCTTCATATATTTGTACAAGAATTGGAAGAATATGTTAAACAATGTGGAAGAATGTTAGATACAAT
..............................................................................................................................((.((((.(((....((.........)).....))).)))))).................................................................................
.........................................................................................................................122...............................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189785TAX577739(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
................................................................................AAAATGAGGATTGCCT.......................................................................................................................................................... 1651.601.60----------------0.400.200.200.200.200.200.20
......................................................................................................AAAGTTACTTTTGGGTGTG................................................................................................................................. 191.000.001.00----------------------
.............................................................................AATGAGGATTGCCTTCA............................................................................................................................................................ 1720.500.50---------------0.50-------