ID: uc010iry.2_intron_0_0_chr4_184130179_f.3p
GENE: (1)
chr4:184174710-184174959+


(1)
BRAIN 		(1)
BREAST 		(8)
CELL-LINE 		(2)
HEART 		(3)
LIVER 		(2)
OTHER 		(2)
SKIN 		(1)
UTERUS

Sense strand
GTGCAGAGACAGGCCCAGAGACTGGTGTGCAAGGCTGCTGCTCCCACTCCGGCCTCTCACCAGTAGACCACACCTCTTTCTGGTAAGGTCAAGTTAGGAAAATCTGGACAGCATGTCAACACCAAATTTGGCTTAGGCTGTGTTTACCTTTCTCAGGAGTTTTAAGTATGTGCATACCTCTTCTATCTTTTTTTTTTTAGTATGGCCAACTTAAAAATTGAACTGTCAAAATTGGACAGTGAGGCCTGGC
...............................................................................((((.((((..(((.(((((...((((((((((..(((((........)))))....)))))...........)))))........((((....))))...))))).)))..)))).))))..................................................
...............................................................................80......................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTTTG.................................................2340.000.0028.007.003.002.00------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTG...................................................2137.000.0019.0011.005.002.00------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTG....................................................2023.000.0016.003.00-4.00------------------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTTAATAG...............................................24219.000.506.008.003.002.00------------------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTTG...................................................208.000.002.001.003.002.00------------------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTG....................................................193.000.002.00--1.00------------------
.......................................................................................................................................................................................................GTATGGCCAACTTAAAAATTGA.............................2212.002.00----2.00-----------------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTAATA.................................................221.000.001.00---------------------
.........................................................................................................................................................................................TCTTTTTTTTTTTAGTATGTTAA..........................................231.000.00----------1.00-----------
............................................................................................................................................................................CATACCTCTTCTATCTTTTTTTTTTAG...................................................271.000.001.00---------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTTTA.................................................231.000.001.00---------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTTTGG................................................241.000.001.00---------------------
............................................................................................................................................................................CATACCTCTTCTATCTTTTTTAG.......................................................231.000.00---1.00------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTTTCG................................................241.000.00-1.00--------------------
....................................................................................AAGGTCAAGTTAGGAAAATCTGGAC.............................................................................................................................................2511.001.00----------------1.00-----
...................................................................................................................................................................................CTTCTATCTTTTTTTTTA.....................................................181.000.001.00---------------------
............................................................................................................................................................................CATACCTCTTCTATCTTTTTTTTTCAG...................................................271.000.00---1.00------------------
......................................................................................................................................................................................CTATCTTTTTTTTTTTCTTG................................................201.000.00--1.00-------------------
..........................................................................................................................................................................................CTTTTTTTTTTTAGTAGCGC............................................201.000.00---------1.00------------
........................................................................................................................................................................................................................................TGGACAGTGAGGCCTGGC1811.001.00-------------------1.00--
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTTCG.................................................231.000.001.00---------------------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTGG...................................................211.000.001.00---------------------
.................................................................................................................................................................................CTCTTCTATCTTTTTTTAAT.....................................................201.000.00--------------------1.00-
.............................................................................................................................................................................................................................ACTGTCAAAATTGGACAGT..........1911.001.00------------1.00---------
..................................................................................................................................................................................TCTTCTATCTTTTTTTTTTTGG..................................................221.000.001.00---------------------
.....................................................................................................ATCTGGACAGCATGTCAACACCATA............................................................................................................................251.000.00-------------1.00--------
...............................................................................................AGGAAAATCTGGACAGCATGTCAACACC...............................................................................................................................2811.001.00------1.00---------------
............................................................................................................................................................................CATACCTCTTCTATCCTAC...........................................................191.000.00--1.00-------------------
..............................................................................................................................................................................TACCTCTTCTATCTTTTTTTTTTTG...................................................251.000.00---1.00------------------
.........................................................................................................................................................................................................................TTGAACTGTCAAAATTGG...............1811.001.00------------------1.00---
...........................................................................................AGTTAGGAAAATCTGGACAGCATG.......................................................................................................................................2411.001.00------1.00---------------
............................................................................................GTTAGGAAAATCTGGACAGCATGTCAACACC...............................................................................................................................3111.001.00----------1.00-----------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTTAATAT...............................................2421.000.501.00---------------------
.....................................................................................................................................................................................TCTATCTTTTTTTTTTATTG.................................................201.000.00-1.00--------------------
...................................................................................................................................................................................CTTCTATCTTTTTTTTTTTA...................................................2020.500.50--0.50-------------------
....................................................................................................................................................................................................................................AAATTGGACAGTGAGG......1650.200.20---------------------0.20

Antisense strand
GTGCAGAGACAGGCCCAGAGACTGGTGTGCAAGGCTGCTGCTCCCACTCCGGCCTCTCACCAGTAGACCACACCTCTTTCTGGTAAGGTCAAGTTAGGAAAATCTGGACAGCATGTCAACACCAAATTTGGCTTAGGCTGTGTTTACCTTTCTCAGGAGTTTTAAGTATGTGCATACCTCTTCTATCTTTTTTTTTTTAGTATGGCCAACTTAAAAATTGAACTGTCAAAATTGGACAGTGAGGCCTGGC
...............................................................................((((.((((..(((.(((((...((((((((((..(((((........)))))....)))))...........)))))........((((....))))...))))).)))..)))).))))..................................................
...............................................................................80......................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
....AGAGACAGGCCCAGAGATAG.................................................................................................................................................................................................................................. 202.000.00-----1.00-1.00--------------
......AGACAGGCCCAGAGATAGG................................................................................................................................................................................................................................. 192.000.00-----1.00-1.00--------------
......AGACAGGCCCAGAGAGAAT................................................................................................................................................................................................................................. 191.000.00-----1.00----------------
........................GTGTGCAAGGCTGCTGG................................................................................................................................................................................................................. 171.000.00----1.00-----------------
................................................................................TGGTAAGGTCAAGTTATG........................................................................................................................................................ 181.000.00-----------1.00----------
....................................GCTGCTCCCACTCCGGCCTTTTG............................................................................................................................................................................................... 231.000.00---------------1.00------
........................GTGTGCAAGGCTGCTTGC................................................................................................................................................................................................................ 181.000.00--------1.00-------------
........................GTGTGCAAGGCTGCTGGCT............................................................................................................................................................................................................... 191.000.00-----------------1.00----
......AGACAGGCCCAGAGAAAG.................................................................................................................................................................................................................................. 181.000.00--------1.00-------------
......................................................................................GGTCAAGTTAGGAAAGCT.................................................................................................................................................. 181.000.00------1.00---------------
........................GTGTGCAAGGCTGCTGCGT............................................................................................................................................................................................................... 191.000.00--------------1.00-------