uc010irs.2_intron_1_0_chr4_178256977

CAGCTCACCAAAGATTTGATTTGTTTCTTTGACTCATCAGTAGAACTCAGGTAAAAAAAATTAAATAAAAGTACTTACGCTGCAATACTGCAGAGCTTGGTTTGGGATGTCACACGTGTAACTAAAGAAACAAATAAATAAAGAGTTTGTAATTGATGAAACCTCATTTTAAAGAAGCCTTCAGATAATATAATTTGTAAGGTCTTTGTTGTTTGCATATGTAACTCTTATACCCTGATTAACATAAAGTGCTTATAGCAAAGCTCATTTTAAAAGACACTTTGTGAAATTATAACCAGACTTATGATTAATGTGTTTTATATTCCTTTCTATAGAAACTCAATGGAAAGCCAACAGAGAATAAGAATGATGAAAGAATTAGATG
..................................................................................................................................................................................................................................................((((((((((((.(((...........))).))).))))))))).((((((((......))))))))............................................................................
...........................................................................................................................................................................................................................................236................................................................................................335................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189786

SRR189784

SRR189787

SRR189782

SRR037937(GSM510475)
293cand2. (cell line)

SRR189785

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR553575(SRX182781)
source: Kidney. (Kidney)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR343335

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR343334

SRR015447(SRR015447)
nuclear small RNAs. (breast)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR189783

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)

SRR037941(GSM510479)
293DroshaTN. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR343337

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037936(GSM510474)
293cand1. (cell line)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR343336

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

SRR037938(GSM510476)
293Red. (cell line)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

TAX577738(Rovira)
total RNA. (breast)

SRR029125(GSM416754)
U2OS. (cell line)

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGTA.........................................................................................................................

77.00

0.00

44.00

21.00

2.00

5.00

2.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCAG..........................................................................................................................

62.22

1.33

1.11

39.78

0.56

8.11

0.33

5.56

2.67

2.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGT..........................................................................................................................

17.00

0.00

8.00

7.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGTAG......................................................................................................................

16.00

0.00

5.00

2.00

8.00

1.00

................................CTCATCAGTAGAACTCAG...............................................................................................................................................................................................................................................................................................................................................

7.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGGA.........................................................................................................................

5.00

0.00

3.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGTAG.........................................................................................................................

4.00

0.00

3.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGCTAG......................................................................................................................

4.00

0.00

1.00

3.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCACAGG.........................................................................................................................

4.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCA...........................................................................................................................

3.78

1.33

0.11

1.56

0.22

0.44

0.11

0.22

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGAT..........................................................................................................................

3.00

0.00

1.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGG..........................................................................................................................

3.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGTA.......................................................................................................................

3.00

0.00

1.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGAA.........................................................................................................................

3.00

0.00

2.00

1.00

.................................TCATCAGTAGAACTCAG...............................................................................................................................................................................................................................................................................................................................................

3.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAATGG.........................................................................................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGTAA......................................................................................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGCA.........................................................................................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGCTAA......................................................................................................................

2.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGTTAT......................................................................................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAACT........................................................................................................................

2.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGC............................................................................................................................

2.00

1.33

1.11

0.11

0.78

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAACTG.......................................................................................................................

2.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGC..............................................................................................................................

1.33

0.11

0.33

0.11

0.33

0.22

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGCTAGA.....................................................................................................................

1.00

0.00

1.00

...........AGATTTGATTTGTTTCTTTGACTCACCAG.........................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGG...........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGGA..........................................................................................................................

1.00

0.00

1.00

.........................................................AAATTAAATAAAAGTACTCCT...................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCACAG..........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGGAG......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAGGCA........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGCTA.......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGCTAAT.....................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCACAAG.........................................................................................................................

1.00

0.00

1.00

..............................................TCAGGTAAAAAAAATTAAAG...............................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................................................................ATAAAGTGCTTATAGTGCA...........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGATA.......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCATGTA.........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAACTT.......................................................................................................................

1.00

0.00

1.00

.................................TCATCAGTAGAACTCTG...............................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................................TACCCTGATTAACATAAG.........................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGTCGA......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGAGA.........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAGTAG........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGTAGA......................................................................................................................

1.00

0.00

1.00

.................................................................................................................................................................................................................................................ACATAAAGTGCTTATAGT..............................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................................................................ATAAAGTGCTTATAGTGC............................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................................................AAAGTGCTTATAGCAGGTA.........................................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................................................................................................................................................................CAGAGAATAAGAATGATGAAAGAATTA....

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGTAT......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGC...........................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGGGAA......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAAAGTTAG......................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCAGCAG.........................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................................................ATATGTAACTCTTATA.........................................................................................................................................................

0.67

....................................................................................................TTTGGGATGTCACACGTG...........................................................................................................................................................................................................................................................................

0.50

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCAT..........................................................................................................................

0.44

1.33

0.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCAA..........................................................................................................................

0.44

1.33

0.44

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGGAG..........................................................................................................................

0.33

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGTAG..........................................................................................................................

0.33

1.33

0.22

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCG.............................................................................................................................

0.33

1.33

0.11

....................................................................................ATACTGCAGAGCTTGG.............................................................................................................................................................................................................................................................................................

0.33

..................................CATCAGTAGAACTCAG...............................................................................................................................................................................................................................................................................................................................................

0.25

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCTG...........................................................................................................................

0.22

1.33

0.22

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGAAG..........................................................................................................................

0.22

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCAAG..........................................................................................................................

0.22

1.33

0.22

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCATG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCAGG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCAT...........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCCA...........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCGG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCTG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCCCAG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCTA..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGT............................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCCG..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCAC..........................................................................................................................

0.11

1.33

0.11

....................................................................................................................................................................................................................................................TAAAGTGCTTATAGCGCC...........................................................................................................................

0.11

1.33

0.11