ID: uc010igr.2_intron_3_0_chr4_55565933_f.3p
GENE: (4)
chr4:55569690-55569939+


(2)
B-CELL
(1)
BRAIN
(1)
BREAST
(7)
CELL-LINE
(2)
OTHER
(6)
SKIN

Sense strand
TCTTTCAACATAATCCTGTAATATGAAGTGTTCCAATGACAGACTTGTCATGATGCTTTATTATTCTTACTTAAGTAGTGTATAATGAAAGTTAATATGGAGAAGTTAATTGCTGCTATTTTTAATTTATCTAGGAAAGATTCTGAATATAAATTATATGGTAATCTTCATTTTTTTTTCTCCTTTTCTGAAACCAGCAGACTAAACTACAGGAGAAATATAATAGCTGGCATCACGGTGACTTCAATTA
..................................................................................................(((((((..((.((.((((((...((((((((.(((((....)))))...)))))))).)))))).....))..))..)))))))...................................................................
.........................................................................................90.......................................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTTAAG...........................................................2252.000.0016.0012.0012.0012.00---------------
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTCAAG...........................................................222.000.00-1.001.00----------------
..........................................................................................................................................................................TTTTTTTTTCTCCTTTTCTGGTC.........................................................231.000.00-----1.00-------------
..............................................................................................................................................................................................................................ATAGCTGGCATCACGGTGACCTC.....231.000.00-------1.00-----------
..........................................................................................................................................................................TTTTTTTTTCTCCTTTTAGG............................................................201.000.00-------1.00-----------
.........................................................................................................................................................................................................CTAAACTACAGGAGAAAT...............................1811.001.00----------1.00--------
...................................................................................................................................................................ATCTTCATTTTTTTTTGG.....................................................................181.000.00---1.00---------------
.............................................................................................................................................................................TTTTTTCTCCTTTTCTGTGTC........................................................211.000.00-----1.00-------------
..............................................................................................ATATGGAGAAGTTAATTGCTG.......................................................................................................................................2111.001.00------------1.00------
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTTAG............................................................211.000.00-1.00-----------------
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTCATTG..........................................................231.000.00--1.00----------------
...................................................................................................................................................................ATCTTCATTTTTTTTTGTG....................................................................191.000.00--1.00----------------
..........................................................................................................................................................................TTTTTTTTTCTCCTTTTCATA...........................................................211.000.001.00------------------
...........................................................................................................................................................................TTTTTTTTCTCCTTTTCCG............................................................191.000.00--1.00----------------
.....................................................................................................................................................................CTTCATTTTTTTTTCTCCTTTTCTGAAACCAG.....................................................3211.001.00-----------1.00-------
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTTTAG...........................................................221.000.00---1.00---------------
...................................................................................................................................................................ATCTTCATTTTTTTTTCTGC...................................................................201.000.00-----1.00-------------
...........................................................................................................................................................................................................................ATAATAGCTGGCATCGCA.............181.000.00---------1.00---------
........................................................................................................................................................................................................................AATATAATAGCTGGCATCACGGTG..........2411.001.00-------------1.00-----
.......................................................CTTTATTATTCTTACAATC................................................................................................................................................................................191.000.00---1.00---------------
...........................................................................................................................................................................TTTTTTTTCTCCTTTTCTCCCC.........................................................221.000.00-----1.00-------------
..............................................................................................................................................................................................................CTACAGGAGAAATATAATAG........................2011.001.00---------------1.00---
...................................................................................................................................................................ATCTTCATTTTTTTTTCTTTAG.................................................................221.000.001.00------------------
........................................................................................................................................................................CATTTTTTTTTCTCCTTTTATTT...........................................................231.000.00-1.00-----------------
.......................................................................................................................................................................TCATTTTTTTTTCTCCTTTTATTT...........................................................241.000.00--------1.00----------
.........................................................................................................................................................................ATTTTTTTTTCTCCTTTTATG............................................................211.000.00-1.00-----------------
.......................................................................................................................................................................................TTTTCTGAAACCAGCAG..................................................1740.250.25----------------0.25--
........................................................................................................................................................................................TTTCTGAAACCAGCAG..................................................1680.120.12------------------0.12

Antisense strand
TCTTTCAACATAATCCTGTAATATGAAGTGTTCCAATGACAGACTTGTCATGATGCTTTATTATTCTTACTTAAGTAGTGTATAATGAAAGTTAATATGGAGAAGTTAATTGCTGCTATTTTTAATTTATCTAGGAAAGATTCTGAATATAAATTATATGGTAATCTTCATTTTTTTTTCTCCTTTTCTGAAACCAGCAGACTAAACTACAGGAGAAATATAATAGCTGGCATCACGGTGACTTCAATTA
..................................................................................................(((((((..((.((.((((((...((((((((.(((((....)))))...)))))))).)))))).....))..))..)))))))...................................................................
.........................................................................................90.......................................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................AGTTAATTGCTGCTAATTT................................................................................................................................ 192.000.00----2.00--------------
.........................................................................AGTAGTGTATAATGAAACG.............................................................................................................................................................. 191.000.00------1.00------------
.......................................................................................................AGTTAATTGCTGCTAACTG................................................................................................................................ 191.000.00----1.00--------------
...................................................................................AATGAAAGTTAATATGTCT.................................................................................................................................................... 191.000.00--------1.00----------
.......................................................................................................AGTTAATTGCTGCTAATTG................................................................................................................................ 191.000.00----1.00--------------
...........................................................................TAGTGTATAATGAAAGG.............................................................................................................................................................. 171.000.00----1.00--------------
......................................................................................................................................................................TTCATTTTTTTTTCTCCTTAAT.............................................................. 221.000.00--------------1.00----
..................................................................................................................................................ATATAAATTATATGGAAAA..................................................................................... 191.000.00------1.00------------
.......................................CATCATGACAAGTCTG................................................................................................................................................................................................... 1640.250.25-----------------0.25-