ID: uc010igq.1_intron_10_0_chr4_55141141_f.5p
GENE: PDGFRA(11)
chr4:55141091-55141340+


(1)
BRAIN
(1)
BREAST
(2)
CELL-LINE
(2)
CERVIX
(2)
LIVER
(1)
OTHER
(6)
SKIN

Sense strand
GCTGCCTTATGACTCAAGATGGGAGTTTCCAAGAGATGGACTAGTGCTTGGTAAGTTCCATGGGGTAACCTCCCAAGACTCCCTTTTCCCTTGCACACAACTTTACAATTTATAGGCCTTGGCAGAATAGAGATCTGAGCTTGTGCTTAGTAAGAACTAGGCAATGGAAATTTGCTTTCAGAAATACATTTCTGTCTTGACAGTAAGTTAATTGGATCATTGCAATGATTTTTTTAAATCTCTTTCCATA
....................................................((((((..(((((.....))))).(((((..((((.((..((.....................))...)).))))..))).)).))))))............................................................................................................
..................................................51.........................................................................................142..........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189787SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................................................TGGCAGAATAGAGATTTTG................................................................................................................1922.000.0014.008.00-----------------
.......................................................................................................................TGGCAGAATAGAGATATTG................................................................................................................1918.000.0012.005.00--------1.00--------
.......................................................................................................................TGGCAGAATAGAGATCTTG................................................................................................................192.000.00-1.001.00----------------
....................GGGAGTTTCCAAGAGATGG...................................................................................................................................................................................................................1912.002.00-----2.00-------------
.CTGCCTTATGACTCAAGATGGGAGTTTCC............................................................................................................................................................................................................................2912.002.00----2.00--------------
.................................AGATGGACTAGTGCTTGG.......................................................................................................................................................................................................1812.002.00--------1.00----1.00-----
..............................AAGAGATGGACTAGTGCTT.........................................................................................................................................................................................................1911.001.00---1.00---------------
............................CCAAGAGATGGACTAGTG............................................................................................................................................................................................................1811.001.00---------1.00---------
....................................................AAGTTCCATGGGGTAATGG...................................................................................................................................................................................191.000.00--------------1.00----
.......................................................................................................................TGGCAGAATAGAGATCCTG................................................................................................................191.000.00-1.00-----------------
..............................AAGAGATGGACTAGTGCTTGGTC.....................................................................................................................................................................................................231.000.00---1.00---------------
.......................................................................................................................TGGCAGAATAGAGATAATG................................................................................................................191.000.001.00------------------
..TGCCTTATGACTCAAGATGGGA..................................................................................................................................................................................................................................2211.001.00------------1.00------
.......................................................................................................................TGGCAGAATAGAGATTTCG................................................................................................................191.000.00-1.00-----------------
..........................TTCCAAGAGATGGACTA...............................................................................................................................................................................................................1711.001.00-----------1.00-------
.......................................................................................................................TGGCAGAATAGAGATCTGG................................................................................................................191.000.00--1.00----------------
........................GTTTCCAAGAGATGGACTAGTGCTTGGTCGGG..................................................................................................................................................................................................321.000.00-------1.00-----------
.......................................................................................................................TGGCAGAATAGAGATCTTGT...............................................................................................................201.000.00--1.00----------------
.......................................................................................................................TGGCAGAATAGAGATTTT.................................................................................................................181.000.001.00------------------
...............AAGATGGGAGTTTCCAAGAGATA....................................................................................................................................................................................................................231.000.00------1.00------------
.........................................................................................................................................................................................................................CATTGCAATGATTTTGTCA..............191.000.001.00------------------
.......................................................................................................................TGGCAGAATAGAGATTTTA................................................................................................................191.000.00-1.00-----------------
............................CCAAGAGATGGACTAGTGCT..........................................................................................................................................................................................................2011.001.00---1.00---------------
.............TCAAGATGGGAGTTTCCA...........................................................................................................................................................................................................................1820.500.50---------------0.50---
..........................................................................................................................................................................TTTGCTTTCAGAAATACAT.............................................................1920.500.50------------------0.50
..............................................................................................................................................................AGGCAATGGAAATTTGCTT.........................................................................1920.500.50-----------------0.50-
....................GGGAGTTTCCAAGAGAT.....................................................................................................................................................................................................................1720.500.50----------------0.50--

Antisense strand
GCTGCCTTATGACTCAAGATGGGAGTTTCCAAGAGATGGACTAGTGCTTGGTAAGTTCCATGGGGTAACCTCCCAAGACTCCCTTTTCCCTTGCACACAACTTTACAATTTATAGGCCTTGGCAGAATAGAGATCTGAGCTTGTGCTTAGTAAGAACTAGGCAATGGAAATTTGCTTTCAGAAATACATTTCTGTCTTGACAGTAAGTTAATTGGATCATTGCAATGATTTTTTTAAATCTCTTTCCATA
....................................................((((((..(((((.....))))).(((((..((((.((..((.....................))...)).))))..))).)).))))))............................................................................................................
..................................................51.........................................................................................142..........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189787SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................................................TTGGATCATTGCAATGCGG.................... 191.000.001.00------------------