| (1) AGO2.ip | (1) B-CELL | (2) BREAST | (19) CELL-LINE | (1) HELA | (1) LIVER | (1) OTHER | (7) SKIN | (1) TESTES | (1) XRN.ip |
| CAGAGAGCACATCCTATTCCTGCATACAACATCCAGGAAGCTTGCCTGGGCTTGTCTCACATTTCCCTCTTGGCTGGTTAGTTTCAGGGTCATGGCTAGGATATGCCTGATATGGAGAAGCTTCTCTTGCTGGGGAAAGGTACTGACACCTCCACACAACTCACGCAGAATTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTCATGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAAGCTCCG ..........................................................................................((((..((((.....)))).)))).......((((((....)))))).(((......))).................................................................................................... ..........................................................................................91.........................................................150.................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR029129(GSM416758) SW480. (cell line) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR390725(GSM850204) small rna immunoprecipitated. (cell line) | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR330920(SRX091758) tissue: normal skindisease state: normal. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................AGTGCAGTGGTGTGATCTCGGAAA............. | 24 | 5.00 | 0.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAG..................................................... | 29 | 5.00 | 0.00 | 1.00 | - | - | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCGG...................................................... | 28 | 4.00 | 0.00 | 1.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCTT..................................................... | 29 | 3.00 | 0.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCATG..................................................... | 29 | 2.00 | 0.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................AGTGCAGTGGTGTGATCTCGGACC............. | 24 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGACGG.................................................... | 30 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTCCC......................................................... | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTGG..................................................... | 29 | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAT..................................................... | 29 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTGATATCT.................................................. | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTCGCG........................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................TGCAGTGGTGTGATCTCGGAAA............. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGAAAGG................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTTTGGGG..................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTTTCGGC..................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................TGCTGGAGTGCAGTGGTGTGATC.................... | 23 | 0 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................CGGCTCACTGCAAGCTCGGC | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCTC..................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTACC.......................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTGATACCTG................................................. | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................ACGCAGAATTTTTTTTTTTTTTTTTTA............................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTTTGGGTC.................................................... | 32 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................ACGCAGAATTTTTTTTTTTTTTTTTA.............................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTAGG.......................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................GATCTCGGCTCACTGCAAGCTAAGT | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAA...................................................... | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................CTAGGATATGCCTGATATGG....................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCCAT..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTCC..................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TGTGATCTCGGCTCACTGCAAGC.... | 23 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AGTGCAGTGGTGTGATCTCGGA............... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................TTTGATACAGAGTCTGATA......................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGAAGGG................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTCGTC........................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGACTG.................................................... | 30 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTGT..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................ACGCAGAATTTTTTTTTTTTTTTTTTTTT........................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTTTTTTTTTTTTTTTTGATACCACC................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGACAGG................................................... | 31 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTCGAG....................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTCA..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTGATAATG.................................................. | 31 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................GAATTTTTTTTTTTTTTTTTTTTTCAAA....................................................... | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................GCAGTGGTGTGATCTCGGCTCAACG......... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTTTGGGC..................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTGATCAGC.................................................. | 31 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................GGTGTGATCTCGGCTCACTGCGC...... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCTTA..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................TGCTGGAGTGCAGTGGTGTGATCGGC................. | 26 | 0 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGAAACG................................................... | 31 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................TCTCGGCTCACTGCAAGCTAAA | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCAAC..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................TTGCTGGGGAAAGGTACTGA........................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTGATACTTT................................................. | 32 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTCGGG..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTCGCC........................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTTTTTGAACG.................................................... | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................ACGCAGAATTTTTTTTTTTTTTTTTTT............................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTTGATCA.................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................ATGCTGGAGTGCAGTGGTGATC...................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................ATGCTGGAGTGCAGTGGTGTGATGATC................. | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................AGTGGTGTGATCTCGGCTCAAGGA........ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGAATTTTTTTTTTTTTTTTTTTTTCAGC....................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................TCTCATGCTGGAGTGCAGTGGTGTG....................... | 25 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ....GAGCACATCCTATTC....................................................................................................................................................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| CAGAGAGCACATCCTATTCCTGCATACAACATCCAGGAAGCTTGCCTGGGCTTGTCTCACATTTCCCTCTTGGCTGGTTAGTTTCAGGGTCATGGCTAGGATATGCCTGATATGGAGAAGCTTCTCTTGCTGGGGAAAGGTACTGACACCTCCACACAACTCACGCAGAATTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTCATGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAAGCTCCG ..........................................................................................((((..((((.....)))).)))).......((((((....)))))).(((......))).................................................................................................... ..........................................................................................91.........................................................150.................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR029129(GSM416758) SW480. (cell line) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR390725(GSM850204) small rna immunoprecipitated. (cell line) | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR330920(SRX091758) tissue: normal skindisease state: normal. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................CCAGCATGAGACTCTGTATCAAAA..................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TTGATACAGAGTCTCATGCAAG..................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................ACAGAGTCTCATGCTTCG.................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ............................................................................................................................................................................................TCCAGCATGAGACTCTGTATCAAAAA.................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........ACATCCTATTCCTGCAAAAG.............................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................ACACCACTGCACTCCAGCA........................ | 19 | 0 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................ATCAAAAAAAAAAAAAAAAAAAAAAA...................................................... | 26 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................CACTCCAGCATGAGACTCTGTATCAAA................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTTTTTTTTTTTTTTTTGATTAAA.................................................. | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................ATACAACATCCAGGAAGCTTTT............................................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................ACTGCACTCCAGCATGAGACTCTGT............................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................AGCCATGACCCTGAAAC......................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................GCTGGAGTGCAGTGGTGTGATCTGGG................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGAGTCTCATGCTGGTAAT................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................ACTCCAGCATGAGACTCTG.................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |