ID: uc010huq.1_intron_19_0_chr3_141308984_f.3p
GENE: RASA2(20)
chr3:141326320-141326569+


(1)
B-CELL 		(8)
CELL-LINE 		(2)
HEART 		(1)
HELA 		(3)
OTHER 		(1)
SKIN 		(1)
XRN.ip

Sense strand
AGTGGTCACTTTAGAAGACAATCAAAATTCATCTGTTCCATGAAACAAATATTTATATATATGCCATTTGTAAGTCTTCTGTAGGTTATTTACACTCCTACCATCAAGAGGATGAGCTTAAACCCTACAGAATTAACCTCTCATCTTTATAATTCTGATGGAAATTACTTTAATTTTGTTTTACTTTTTTTATTATTTAGGCAAAGATGCAATCTACACAATCCCAGTAAAAAACATTCTTGCTGTGGAA
............................................(((((...(((........(((...((..((((((((((((...........))))).....)))))))..))..........((((((((..............)))))))).))).........))).))))).......................................................................
............................................45.........................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189782SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189787SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAAAAG......................................................25135.000.00129.00----4.00--2.00-------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTC..........................................................2117.000.004.0013.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTC.........................................................229.000.003.006.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCT.........................................................229.000.003.004.002.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTTCT.......................................................248.000.001.006.001.00-------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTTTCT.......................................................237.000.00-3.004.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTTT.......................................................247.000.003.004.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTTC........................................................236.000.002.002.002.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTCTT.......................................................244.000.00-3.001.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTATAAG......................................................2514.001.004.00---------------
..............................................................................................................................................................................TTTGTTTTACTTTTTTTAAAAG......................................................223.000.003.00---------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTTTC........................................................223.000.00-2.001.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTT........................................................233.000.001.002.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTTCC.......................................................243.000.00-2.001.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTA.........................................................222.000.001.001.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAATAG......................................................252.000.002.00---------------
.................................................TATTTATATATATGCACG.......................................................................................................................................................................................182.000.00----2.00-----------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTC..........................................................202.000.00-2.00--------------
................................................................................................................................................................................TGTTTTACTTTTTTTATTGTTC....................................................222.000.00------2.00---------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTCT........................................................232.000.00-2.00--------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTAAAAG......................................................242.000.002.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTCTTT........................................................232.000.001.001.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAAAGG......................................................251.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTCC.......................................................241.000.00-1.00--------------
.................................................................................................................GAGCTTAAACCCTACCACC......................................................................................................................191.000.00---------1.00------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTTC.......................................................241.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTG..........................................................211.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTACAAG......................................................251.000.001.00---------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTCTT........................................................221.000.00--1.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTCTAT...........................................................201.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTCT.......................................................241.000.00-1.00--------------
.................................................TATTTATATATATGCAGG.......................................................................................................................................................................................181.000.00----1.00-----------
................................................................................................................................................................................TGTTTTACTTTTTTTACG........................................................181.000.00----1.00-----------
..............................................................................................................................................................................TTTGTTTTACTTTTTTCTAA........................................................201.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTGTTT.......................................................241.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTATCT........................................................231.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTATAAT......................................................2511.001.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTAAAA........................................................231.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAACTG......................................................251.000.001.00---------------
................................................................................................................................................................................TGTTTTACTTTTTTTATGTTC.....................................................211.000.00----1.00-----------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAT.........................................................2211.001.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTGTTT........................................................231.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTATTTG......................................................251.000.001.00---------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTCT.........................................................211.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAAATG......................................................251.000.001.00---------------
.........................................................................................................................................CTCTCATCTTTATAAACT...............................................................................................181.000.00----------1.00-----
.................................................TATTTATATATATGCCCG.......................................................................................................................................................................................181.000.00----1.00-----------
................................................................................................................................................................................TGTTTTACTTTTTTTATTGTGC....................................................221.000.00------1.00---------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTTGC.......................................................241.000.00--1.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTGT.........................................................221.000.00--1.00-------------
..............................................................................................................................................................................TTTGTTTTACTTTTTTCTTC........................................................201.000.00-1.00--------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTTTTG.......................................................231.000.001.00---------------
...............................................AATATTTATATATATCTC.........................................................................................................................................................................................181.000.00----------1.00-----
..................................................................................................................................................................................TTTTACTTTTTTTATTATTTTTAG................................................241.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTCTA............................................................191.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCCTC.......................................................241.000.00-1.00--------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTCTCT.......................................................231.000.00-1.00--------------
..........................................................................................TACACTCCTACCATCTAAT.............................................................................................................................................191.000.00-----------1.00----
......................................................................................................................................................................................ACTTTTTTTATTATTTAAG.................................................191.000.00-----1.00----------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTAACAG......................................................251.000.001.00---------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTCTA........................................................231.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTCC........................................................231.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTGTT........................................................231.000.00--1.00-------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTTCTC.......................................................241.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTCTTC........................................................231.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTTTTATTAAAAG...................................................281.000.001.00---------------
............................................................................................................................................................................ATTTTGTTTTACTTTTTTTTCTC.......................................................231.000.00-1.00--------------
...........................................................................................................................................................................AATTTTGTTTTACTTTTAC............................................................191.000.001.00---------------
.............................................................................TCTGTAGGTTATTTAC.............................................................................................................................................................1660.330.33--0.33-------------

Antisense strand
AGTGGTCACTTTAGAAGACAATCAAAATTCATCTGTTCCATGAAACAAATATTTATATATATGCCATTTGTAAGTCTTCTGTAGGTTATTTACACTCCTACCATCAAGAGGATGAGCTTAAACCCTACAGAATTAACCTCTCATCTTTATAATTCTGATGGAAATTACTTTAATTTTGTTTTACTTTTTTTATTATTTAGGCAAAGATGCAATCTACACAATCCCAGTAAAAAACATTCTTGCTGTGGAA
............................................(((((...(((........(((...((..((((((((((((...........))))).....)))))))..))..........((((((((..............)))))))).))).........))).))))).......................................................................
............................................45.........................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189782SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189787SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
........................AAATTCATCTGTTCCGGTC............................................................................................................................................................................................................... 199.000.00---9.00------------
.......................................................................................ATTTACACTCCTACCTCTG................................................................................................................................................ 192.000.00------------1.001.00--
.......................................................................................ATTTACACTCCTACCATCTCTG............................................................................................................................................. 221.000.00--------------1.00-
..............................................................................CTGTAGGTTATTTACACT.......................................................................................................................................................... 181.000.00-------1.00--------
.................................................................................................................................................................................................................CAATCTACACAATCCTCTA...................... 191.000.00---------------1.00
.......................................................................................ATTTACACTCCTACCATCTCTA............................................................................................................................................. 221.000.00---------1.00------
...............................................................................TGTAGGTTATTTACACTCA........................................................................................................................................................ 191.000.00-------1.00--------