ID: uc010hmr.2_intron_12_0_chr3_52964447_r.5p
GENE: (4)
chr3:52964757-52965006-


(1)
AGO2.ip 		(2)
B-CELL 		(4)
BRAIN 		(10)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(3)
LIVER 		(1)
OTHER 		(1)
XRN.ip

Sense strand
CCAAAGTGAAAGAGGAAGAGGAAGAGCCATTACCATCTTACTTATTTAAGGTAAAAACAAAACATGTGATAGACCGGTATTGCTCCCCTTACAGTAGAGTAAAGCAACGCAGGAGGTGAAAGTGTAAAGCAGCCCCTGCAGTCGGTAAGAATGCCATGGTCTCTGAAGGAGGAGGGTGTGTTAAGGCTGGACTGATGATCATCCTTGTTTTCTTCTAACAGTTGTCTAGATTTTCTCCCCAAGTTCTCCT
.................................................................................................................................(((((...(((.((.....)).)))((((.(((((......))))).))))....))))).............................................................
.........................................................................................................................122.................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		TAX577588(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040040(GSM532925)
G612N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)
.CAAAGTGAAAGAGGAGTA.......................................................................................................................................................................................................................................187.000.00-3.00------2.00----2.00------------------
......................................................................................................................................................................................AAGGCTGGACTGATGACTGG................................................205.000.005.00-------------------------------
......................................................................................................................................................................................AAGGCTGGACTGATGACTG.................................................195.000.005.00-------------------------------
..............................................................................................................................................................GTCTCTGAAGGAGGAGGGTGTGTT....................................................................2414.004.00---4.00----------------------------
.....................................................................................................................................................................................TAAGGCTGGACTGATGACTG.................................................203.000.003.00-------------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTATAG...................................................................203.000.00----1.00-1.00---1.00---------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTGGTT.................................................................2213.001.00--1.00----1.00---------------------1.00--
.....................................................................................................................................................................................TAAGGCTGGACTGATGACTGG................................................212.000.002.00-------------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTGGTA.................................................................2212.001.00----1.001.00--------------------------
.............................................................................................GTAGAGTAAAGCAACGCAGGAGGTGA...................................................................................................................................2612.002.00--------------2.00-----------------
.CAAAGTGAAAGAGGAGTAA......................................................................................................................................................................................................................................192.000.00-2.00------------------------------
..........AGAGGAAGAGGAAGAGCCATT...........................................................................................................................................................................................................................2112.002.00---------2.00----------------------
..........AGAGGAAGAGGAAGAGCCA.............................................................................................................................................................................................................................1921.501.50---------------1.50----------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTATAT...................................................................201.000.00------1.00-------------------------
..............................................................................................................................AAGCAGCCCCTGCAGTCGGACA......................................................................................................221.000.00------------------------------1.00-
............AGGAAGAGGAAGAGCCATT...........................................................................................................................................................................................................................1911.001.00------------------1.00-------------
.......................................................................................................................................................................................AGGCTGGACTGATGACTG.................................................181.000.001.00-------------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTAGA..................................................................2111.001.00--1.00-----------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTAGTT.................................................................2211.001.00-----1.00--------------------------
....................................................................................................................................................................GAAGGAGGAGGGTGTGTAGGT.................................................................211.000.00-------1.00------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGT.....................................................................1811.001.00--1.00-----------------------------
......................................................................................................................................................................................AAGGCTGGACTGATGGAG..................................................181.000.00-----1.00--------------------------
.....................................................................................................................................................................................TAAGGCTGGACTGATGATC..................................................1911.001.00-----------------------1.00--------
....................................................................................................................................................................GAAGGAGGAGGGTGTATA....................................................................181.000.00--------------------------1.00-----
............................................................................................................................................................TGGTCTCTGAAGGAGGAGGGCGTG......................................................................241.000.00------------1.00-------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTGCC..................................................................2111.001.00--1.00-----------------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTAG.....................................................................181.000.00-------------------------------1.00
....................................................................................................................................................................GAAGGAGGAGGGTGTTTAG...................................................................191.000.00-----------1.00--------------------
....................................................................................................................................................................GAAGGAGGAGGGTGTGTGGGT.................................................................211.000.00-----------1.00--------------------
.................................................................................................................................................................TCTGAAGGAGGAGGGTGTG......................................................................1911.001.00-------------------------1.00------
.....GTGAAAGAGGAAGAGCCAG..................................................................................................................................................................................................................................191.000.00-----------------1.00--------------
.....................................................................................................................................................................AAGGAGGAGGGTGTGTGGGT.................................................................201.000.00----------------1.00---------------
............................................................................................................................................................................................................................GTTGTCTAGATTTTCAGTT...........191.000.00------1.00-------------------------
....................................................................................................................................................................GAAGGAGGAGGGTGTGTGGTT.................................................................211.000.00-------1.00------------------------
..............................................................................................................................AAGCAGCCCCTGCAGTCTG.........................................................................................................191.000.00--------------------1.00-----------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTGGCT.................................................................2211.001.00----1.00---------------------------
........AAAGAGGAAGAGGAAGAGCCATTACCAC......................................................................................................................................................................................................................281.000.00------------1.00-------------------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTAGCG.................................................................2211.001.00---------------------1.00----------
...................................................................................................................................................................TGAAGGAGGAGGGTGTGTGGT..................................................................2111.001.00---------------------------1.00----
......TGAAAGAGGAAGAGGAAGA.................................................................................................................................................................................................................................1940.250.25--------0.25-----------------------

Antisense strand
CCAAAGTGAAAGAGGAAGAGGAAGAGCCATTACCATCTTACTTATTTAAGGTAAAAACAAAACATGTGATAGACCGGTATTGCTCCCCTTACAGTAGAGTAAAGCAACGCAGGAGGTGAAAGTGTAAAGCAGCCCCTGCAGTCGGTAAGAATGCCATGGTCTCTGAAGGAGGAGGGTGTGTTAAGGCTGGACTGATGATCATCCTTGTTTTCTTCTAACAGTTGTCTAGATTTTCTCCCCAAGTTCTCCT
.................................................................................................................................(((((...(((.((.....)).)))((((.(((((......))))).))))....))))).............................................................
.........................................................................................................................122.................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		TAX577588(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040040(GSM532925)
G612N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)
.......................................................................................................................................................................................................CATCCTTGTTTTCTTCTAGTCT............................. 221.000.00------------------------1.00-------
................................................................................................................................GCAGCCCCTGCAGTCCAG........................................................................................................ 181.000.00-------------------1.00------------
.......................................................................................................................................................................................................CATCCTTGTTTTCTTCTAGTTA............................. 221.000.00----------------------------1.00---
.......................................................................................................................................................................................................CATCCTTGTTTTCTTCTAGGCA............................. 221.000.00----------1.00---------------------
...............................................................................................................................CTTACCGACTGCAGGGGCTGCT..................................................................................................... 2211.001.00----------------------1.00---------