ID: uc010het.1_intron_1_0_chr3_17051579_f.5p
GENE: PLCL2(2)
chr3:17051529-17051778+


(6)
B-CELL 		(3)
BRAIN 		(3)
BREAST 		(9)
CELL-LINE 		(6)
HEART 		(3)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(2)
OTHER 		(3)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
TTGGTTGCCAACTCCGCAGATGTTGCAAACATCTGGGTTACAGGACTGCGGTACCTAATTTCTTATGGAAAACATACACTTGATATGTTAGAAAGTAGCCAAGATAACATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAAATTGATGTAGATAACCTTGGACATATAACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTCAATCCTGGTTTAAAAACGAGCAAAATTGAGCTTAAGTTCAAAG
..........................................................................................................(((((((....(((.((((((((((...((((....))))...))).)).))))).))).......))).))))......................................................................
.....................................................................................................102......................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR343334SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR343336GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
..........................................................................................................ACATGAGGACTTCTTGG...............................................................................................................................17110.0010.00-10.00---------------------------------------------
................................................................................TGATATGTTAGAAAGTAGCCAAGATAACATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAAATTGATGTAGATAACCTTGG......................................................................................8416.006.006.00----------------------------------------------
.............................................................................................................................................GAAATTGATGTAGATAACCTTGGACATATAACTCTGTGTAATGCTGTGCAATGTATCAGAAACCT............................................6516.006.006.00----------------------------------------------
.................................................................................................................................................................TGGACATATAACTCTG.........................................................................1615.005.00----2.00----------------1.00----1.00--------------1.00-----
..........................................................................................................................................................................AACTCTGTGTAATGCTG...............................................................1724.504.50-4.50---------------------------------------------
...................................GGTTACAGGACTGCGGTA.....................................................................................................................................................................................................1814.004.00-----------2.001.00-------------------------------1.00--
............................................................................CACTTGATATGTTAGAAAGTAGC.......................................................................................................................................................2314.004.00--4.00--------------------------------------------
................................................................................................................................................ATTGATGTAGATAACCTTGG......................................................................................2013.003.00--3.00--------------------------------------------
...............................................................................TTGATATGTTAGAAAGTAGCCAAGATAACATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAAATTGATGTAGATAAC...........................................................................................8013.003.003.00----------------------------------------------
......................................TACAGGACTGCGGTAACTG.................................................................................................................................................................................................193.000.00---3.00-------------------------------------------
..................................GGGTTACAGGACTGCGGT......................................................................................................................................................................................................1812.002.00-------1.00------------1.00--------------------------
..........................................................................................................................................AGTGAAATTGATGTAGATAACCTTGGACATA.................................................................................3112.002.00-----------------2.00-----------------------------
.........................................AGGACTGCGGTACCTAATT..............................................................................................................................................................................................1912.002.00-------2.00---------------------------------------
......................................................................................................................................................................................................................................AATTGAGCTTAAGTTCAAAG2012.002.00------2.00----------------------------------------
...................................GGTTACAGGACTGCGGTAC....................................................................................................................................................................................................1912.002.00---------------2.00-------------------------------
........CAACTCCGCAGATGTTGC................................................................................................................................................................................................................................1812.002.00-------------------2.00---------------------------
......................................TACAGGACTGCGGTAAC...................................................................................................................................................................................................171.000.00-------------------------1.00---------------------
....................................................................................................................................................................................................................TGGTTTAAAAACGAGCAAAATTGAGC............2611.001.00----------1.00------------------------------------
...................................................................................................................................................GATGTAGATAACCTTGGACATATAACT............................................................................2711.001.00----------------------1.00------------------------
.....................................................................................................................................................TGTAGATAACCTTGGACATATAACT............................................................................2511.001.00-------------1.00---------------------------------
.................................................................................................................................CAAATGTTTAGTGAAATTGATGTAGATAACCTTGGT.....................................................................................361.000.00---------------------------------------------1.00-
....................................................................................................................................................................ACATATAACTCTGTGTAATGCTGTGCA...........................................................2711.001.00------1.00----------------------------------------
....................................GTTACAGGACTGCGGTTT....................................................................................................................................................................................................181.000.00--------------------------------1.00--------------
..................................................................................................................................................TGATGTAGATAACCTTGGAC....................................................................................2011.001.00---------------------------1.00-------------------
.....................................TTACAGGACTGCGGTACCT..................................................................................................................................................................................................1911.001.00----------------------------------------------1.00
.....................................................................................................AGATAACATGAGGACTTCTT.................................................................................................................................2011.001.00-------------------------------------1.00---------
......................................................................................................................................................GTAGATAACCTTGGAC....................................................................................1611.001.00----------1.00------------------------------------
........................................................................................TAGAAAGTAGCCAAGATAACA.............................................................................................................................................2111.001.00----------------1.00------------------------------
..............................................................................................................................................AAATTGATGTAGATAACCTTGG......................................................................................2211.001.00--1.00--------------------------------------------
....................................................................................................AAGATAACATGAGGACTTCTTG................................................................................................................................2211.001.00--------1.00--------------------------------------
......................................TACAGGACTGCGGTAATTG.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------
.TGGTTGCCAACTCCGCA........................................................................................................................................................................................................................................1711.001.00-----------------------1.00-----------------------
................................................................................................................................................ATTGATGTAGATAACCTTGGACAT..................................................................................2411.001.00------------------------1.00----------------------
......................................TACAGGACTGCGGTACCTGA................................................................................................................................................................................................201.000.00-----------------------------------1.00-----------
..............................................................................................................................................AAATTGATGTAGATAACCTTGGACATAT................................................................................2811.001.00---------1.00-------------------------------------
..................................................................................................................................AAATGTTTAGTGAAATTGATGTAGAT..............................................................................................2611.001.00--------1.00--------------------------------------
..............................ATCTGGGTTACAGGACTGCGGTT.....................................................................................................................................................................................................231.000.00-------1.00---------------------------------------
......................................TACAGGACTGCGGTACCTTAA...............................................................................................................................................................................................211.000.00------------------------------1.00----------------
................................................................................TGATATGTTAGAAAGTAGCCAAGATAAC..............................................................................................................................................2811.001.00--------1.00--------------------------------------
.................................TGGGTTACAGGACTGCGGTAC....................................................................................................................................................................................................2111.001.00-------------1.00---------------------------------
..................................GGGTTACAGGACTGCGGTA.....................................................................................................................................................................................................1911.001.00---------1.00-------------------------------------
..GGTTGCCAACTCCGCAGATGTTGCAAACATCTGGGTTACAGGACTGCGGT......................................................................................................................................................................................................5011.001.001.00----------------------------------------------
........................................................................................................................................................AGATAACCTTGGACATATAACTCTGTGTA.....................................................................2911.001.00----1.00------------------------------------------
....................................................................................................................................................................ACATATAACTCTGTGTAATGCTG...............................................................2311.001.00------1.00----------------------------------------
......................................TACAGGACTGCGGTACCTTA................................................................................................................................................................................................201.000.00--------------------------------------1.00--------
.........................................................................................................................................TAGTGAAATTGATGTAGATAACC..........................................................................................2311.001.00----1.00------------------------------------------
................................................................................TGATATGTTAGAAAGTAGCCAAG...................................................................................................................................................2311.001.00----------------------------1.00------------------
.......................................ACAGGACTGCGGTACCTA.................................................................................................................................................................................................1811.001.00------------1.00----------------------------------
....................................................................................................AAGATAACATGAGGACTTC...................................................................................................................................1911.001.00--------------------1.00--------------------------
...........................................................................................................................................GTGAAATTGATGTAGATAACCTTGGACATATAAC.............................................................................3411.001.00---------1.00-------------------------------------
............................ACATCTGGGTTACAGGACTGCGG.......................................................................................................................................................................................................2311.001.00---------------------------------------1.00-------
................................................................ATGGAAAACATACACTTGATAT....................................................................................................................................................................2211.001.00---------------1.00-------------------------------
................................................................................................................................................................................GTGTAATGCTGTGCAATGTATCAGAAACC.............................................2911.001.00------------------------------------------1.00----
..................................GGGTTACAGGACTGCGGGA.....................................................................................................................................................................................................191.000.00----------------------1.00------------------------
............................................................................................................................................TGAAATTGATGTAGATAACCTTGGAC....................................................................................2611.001.00--1.00--------------------------------------------
................................................................................................................................................................TTGGACATATAACTCTGTGTAATGCTGTGC............................................................3011.001.00----------1.00------------------------------------
............................................................................................................................................................AACCTTGGACATATAACTCTGTGT......................................................................2411.001.00-------------------------------1.00---------------
.......................................ACAGGACTGCGGTACC...................................................................................................................................................................................................1611.001.00----------------------------------------1.00------
...GTTGCCAACTCCGCAGATGTTGC................................................................................................................................................................................................................................2311.001.00----1.00------------------------------------------
..................................GGGTTACAGGACTGCGGTG.....................................................................................................................................................................................................1911.002.00-----------1.00-----------------------------------
..................................................................................................................................AAATGTTTAGTGAAATTGATGTAGATAACC..........................................................................................3011.001.00----1.00------------------------------------------
.............................CATCTGGGTTACAGGACTGCGGTA.....................................................................................................................................................................................................2411.001.00------------1.00----------------------------------
..........................................................................................................................................................................................................ACCTCAATCCTGGTTTAAAAACGAGC......................2611.001.00----------------------------------1.00------------
................................................................................TGATATGTTAGAAAGTAGC.......................................................................................................................................................1911.001.00---------------------1.00-------------------------
..................................................................................................................................................TGATGTAGATAACCTTGGACATATAAC.............................................................................2711.001.00----------------1.00------------------------------
..............................................................................................................................................................CCTTGGACATATAACTC...........................................................................1711.001.00-------------1.00---------------------------------
......................................TACAGGACTGCGGTAATTA.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------
......................................TACAGGACTGCGGTAACGG.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------
......................................TACAGGACTGCGGTAACCG.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------
......................................TACAGGACTGCGGTATTGG.................................................................................................................................................................................................191.000.00---1.00-------------------------------------------
................................................................................................................................................................................................TGTATCAGAAACCTCACAG.......................................191.000.00-----1.00-----------------------------------------
..........................................................................................................................................................................................................................AAAAACGAGCAAAAT.................1590.110.11-----------------------0.11-----------------------

Antisense strand
TTGGTTGCCAACTCCGCAGATGTTGCAAACATCTGGGTTACAGGACTGCGGTACCTAATTTCTTATGGAAAACATACACTTGATATGTTAGAAAGTAGCCAAGATAACATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAAATTGATGTAGATAACCTTGGACATATAACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTCAATCCTGGTTTAAAAACGAGCAAAATTGAGCTTAAGTTCAAAG
..........................................................................................................(((((((....(((.((((((((((...((((....))))...))).)).))))).))).......))).))))......................................................................
.....................................................................................................102......................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR343334SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR343336GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
..............................................................................ACTTTCTAACATATCAAG.......................................................................................................................................................... 1813.003.00-----2.00--------1.00--------------------------------
...................................GGTTACAGGACTGCGGTT..................................................................................................................................................................................................... 182.000.00------------------2.00----------------------------
...................................................................................................................................................................................TAATGCTGTGCAATGTCCA.................................................... 192.000.00-----------------------------1.00-------------1.00---
...................................................................................................................................................................................TAATGCTGTGCAATGTCC..................................................... 182.000.00-----1.00--------1.00--------------------------------
..........................................................................................................................................................................................................................................GAGCTTAAGTTCAAAGGAT 191.000.00---------------------------------1.00-------------
...........................................................................................................................................................TAACCTTGGACATATAACA............................................................................ 191.000.00------------------------------------1.00----------
.......................................................................................................................................TTTAGTGAAATTGATGG.................................................................................................. 171.000.00--------------1.00--------------------------------