ID: uc010gxu.2_intron_1_0_chr22_39419020_f.5p
GENE: (2)
chr22:39418970-39419219+


(1)
AGO2.ip 		(3)
B-CELL 		(2)
BRAIN 		(11)
BREAST 		(18)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(3)
HELA 		(8)
LIVER 		(1)
OTHER 		(31)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTAAGCAGCTGGGAATGCAGAAAACACATAAGTAAAATGTCTGGCGGCGGGCTCTCAACTGTGTATTTTTTCCCCACATTTATTTATTTTTTCTATTTATTTATTTATTTATTTATTTTGAGACAGAGTCTCCATCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGATCACTGCAACCTCCACCTCTTGGGTTC
.........................................................................................................................................................................(((((...)))))....................................................................
.......................................................................................................................120...............................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787
...................................................................................................................................................................................................................TGCGATCTCAGATCAGACG....................1945.000.00-----4.00--1.001.002.003.002.003.003.00--2.00---2.001.00-1.00-1.001.002.00-1.00----------1.00--1.00-1.00-1.00------1.00-1.001.001.001.001.00-1.00---1.00----1.00---1.00-----1.00--
...................................................................................................................................................................................................................TGCGATCTCAGATCAGAC.....................1825.000.00-----5.00--4.003.00-1.001.00--1.00--1.00-1.00-----1.00---1.00--1.00--------1.00-------------------1.00-1.00----------1.00----1.00----
...................................................................................................................................................................................................................TGCGATCTCAGATCAGA......................1720.000.00-----5.00----2.00----1.002.00-1.001.00--1.00--1.00---1.00--------1.00-1.00----------1.00----1.00----------------1.00-----------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCTG...............................................................................3015.000.002.001.007.005.00---------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTACTG.............................................................................3111.000.007.001.00-3.00---------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTCAG..............................................................................306.000.003.003.00-----------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTTTTG..................................................................................306.000.002.00-1.003.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTAACAG.................................................................................285.000.00-1.004.00----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTAG..............................................................................305.000.004.001.00-----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTACT..............................................................................304.000.00-1.001.002.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGATG....................193.000.00---------1.00----------1.00------------------1.00---------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTCAG..............................................................................313.000.002.001.00-----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTCTTG...............................................................................293.000.002.001.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAG.......................163.000.00-------------------------------------------1.00---1.00----------------------1.00--------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTTAG..............................................................................333.000.001.002.00-----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTG...............................................................................293.000.001.00-1.001.00---------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATCTAG................................................................................283.000.002.001.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTCATG...............................................................................303.000.00-2.00----1.00------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTCATG...............................................................................293.000.001.002.00-----------------------------------------------------------------------------------
............................................................................................................................CACATTTATTTATTTTTAG...........................................................................................................193.000.002.00--1.00---------------------------------------------------------------------------------
........................................................................................................................................TTTTTTCTATTTATTTATTTATTTATTTATTTTG................................................................................3412.002.00-2.00-----------------------------------------------------------------------------------
................................................................................................................................................ATTTATTTATTTATTTATTTATCATG................................................................................262.000.001.001.00-----------------------------------------------------------------------------------
....................................................................................................................................TTTATTTTTTCTATTTATTTATTTTCAG..........................................................................................282.000.002.00------------------------------------------------------------------------------------
.................................................................................................................................................TTTATTTATTTATTTATTTATTTTGACAAC...........................................................................302.000.00----2.00--------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTCTTG.............................................................................322.000.001.001.00-----------------------------------------------------------------------------------
.........................................................................................................................................TTTTTCTATTTATTTATTTATTTTTTG......................................................................................272.000.00-1.001.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGAGG....................192.000.00------------------------1.00----------1.00-------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGTG.....................182.000.00-------------------------------------1.00----------------------------1.00------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCT................................................................................292.000.00--1.001.00---------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTATTTATTG..............................................................................342.000.00--1.001.00---------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTAACAG.................................................................................272.000.002.00------------------------------------------------------------------------------------
.CTTTCGAGGCCCGGTAATTG.....................................................................................................................................................................................................................................202.000.00-----------------------1.00----------1.00--------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTTTG................................................................................3081.621.620.750.120.120.62---------------------------------------------------------------------------------
.......................................................................................................................................ATTTTTTCTATTTATTTATTTATTTATTG......................................................................................2931.000.33--1.00----------------------------------------------------------------------------------
..................................................................................................................................TATTTATTTTTTCTATTTATTTATTTTAG...........................................................................................291.000.00---1.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTATTG...............................................................................301.000.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTTATT.............................................................................341.000.00---1.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTACT..............................................................................311.000.00----1.00--------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATAAG.................................................................................271.000.00--1.00----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTGGAG..................................................................................271.000.00----1.00--------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTAG.................................................................................291.000.00--1.00----------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTGGG...................................................................................271.000.00----1.00--------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTCG....................................................................................271.000.00-1.00-----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATAATG....................................................................................241.000.001.00------------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTATTTATG...............................................................................331.000.001.00------------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTAATG.............................................................................311.000.00--1.00----------------------------------------------------------------------------------
....................................................................................................................................TTTATTTTTTCTATTTATTTCTTT..............................................................................................241.000.00------1.00------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTCCTG......................................................................................251.000.00-1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCGATCTCAGATCACACGT...................191.000.00-----------------------------------------------------------------------------1.00-------
............................................................................................................................CACATTTATTTATTTTTTAG..........................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCTC...............................................................................301.000.00----1.00--------------------------------------------------------------------------------
...................................................................................................................................ATTTATTTTTTCTATTTATTTATTTCAAG..........................................................................................291.000.00------1.00------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTAATG...............................................................................291.000.001.00------------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTATG..............................................................................311.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTAACA..................................................................................271.000.00--1.00----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTCTTG..............................................................................301.000.001.00------------------------------------------------------------------------------------
..........................................................................................................................CCCACATTTATTTATTTTTTTAAT........................................................................................................241.000.00--1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGACA....................191.000.00-----------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCATACA....................191.000.00--------------------------------1.00----------------------------------------------------
..............................................................................................................................................................................................................AGTGGTGCGATCTCATGGC.........................191.000.00----------------------------------------------------1.00--------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATATCG....................................................................................281.000.00---1.00---------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTACTG..................................................................................291.000.001.00------------------------------------------------------------------------------------
........................................................................................GTCTGGCGGCGGGCTCTCAACTGTGT........................................................................................................................................2611.001.00-------------------------------------------------------------------------------1.00-----
.......................................................................................................................................ATTTTTTCTATTTATTTATTTATTTC.........................................................................................261.000.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTAAAG..................................................................................291.000.00---1.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTCTGG.............................................................................321.000.00----1.00--------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTGTG..............................................................................311.000.00----1.00--------------------------------------------------------------------------------
.........................................................................................................................................TTTTTCTATTTATTTATTTATTTATTTCAG...................................................................................301.000.00-1.00-----------------------------------------------------------------------------------
.........................................................................................................................................TTTTTCTATTTATTTATTTTTAG..........................................................................................231.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTCAAG.......................................................................................221.000.00------1.00------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTAG.................................................................................301.000.001.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCGATCTCAGATCACACG....................181.000.00---------------------------------------------1.00---------------------------------------
.................................................................................................................................................................TTTATTTTGAGACAGAGTATA....................................................................211.000.00-------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCAGTGCGTG....................................311.000.00----1.00--------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTCAAA...............................................................................291.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATCG..................................................................................271.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTCTTG...............................................................................301.000.001.00------------------------------------------------------------------------------------
...............................................................................................................................................TATTTATTTATTTATTTATTTATTTTGAAGCC...........................................................................321.000.00-------1.00-----------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATCTAC................................................................................281.000.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTAG...............................................................................321.000.00-1.00-----------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTTTTG.............................................................................341.000.00-1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTCCAG..................................................................................271.000.00-1.00-----------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTACC...........................................................................................211.000.001.00------------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTTCTTG..............................................................................321.000.00-1.00-----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATCTAG....................................................................................241.000.00--1.00----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTCCG...............................................................................301.000.00--1.00----------------------------------------------------------------------------------
.....................................................AGCAGCTGGGAATGCAGGCGC................................................................................................................................................................................211.000.00----1.00--------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTATTTTTTTA.............................................................................351.000.00-1.00-----------------------------------------------------------------------------------
.....................................................................................AATGTCTGGCGGCGGGCTCTCAACTGTGT........................................................................................................................................2911.001.00--------------------------------------------------1.00----------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTAAAG...............................................................................291.000.00------1.00------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTCCA.......................................................................................211.000.001.00------------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTTCAG...............................................................................311.000.001.00------------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTAACG..................................................................................261.000.00-1.00-----------------------------------------------------------------------------------
.........................................................................................TCTGGCGGCGGGCTCTCAACTCTTG........................................................................................................................................251.000.00---------------------------------------------------------------------1.00---------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTACAG......................................................................................251.000.00--1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCACG.........................................261.000.00----1.00--------------------------------------------------------------------------------
........................................................................................................................................TTTTTTCTATTTATTTATTTATTTATTTATAC..................................................................................321.000.001.00------------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTCACT...................................................................................261.000.00-------1.00-----------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTCAA..............................................................................311.000.00---1.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTCAG................................................................................291.000.001.00------------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTTCAG..................................................................................301.000.001.00------------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTCTG................................................................................281.000.001.00------------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTG................................................................................3141.001.00-0.250.250.50---------------------------------------------------------------------------------
.......................................................................................................................................ATTTTTTCTATTTATTTATTTTAG...........................................................................................241.000.00-1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGCCG....................191.000.00------------------------------------------------------1.00------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTAATTA.................................................................................291.000.00--1.00----------------------------------------------------------------------------------
....................................................................................................................................................ATTTATTTATTTATTTATTTTGAGACAGATCG......................................................................321.000.001.00------------------------------------------------------------------------------------
.........................................................................................................................................TTTTTCTATTTATTTATTTATTTATTTTG....................................................................................291.000.00-1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................TGGTGCGATCTCAGATCAGTG.....................211.000.00-----------------------------------------------------------------1.00-------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTATA..............................................................................301.000.00--1.00----------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTCATG..........................................................................................221.000.00--1.00----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTGGGG..................................................................................271.000.00----1.00--------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTATTTCTAG..............................................................................341.000.001.00------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAGGGG....................191.000.00---------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCATG.........................................261.000.00-------1.00-----------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTTTAG...............................................................................311.000.001.00------------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTACG...................................................................................261.000.00-1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCAGTGGGGCG...................................321.000.00-------1.00-----------------------------------------------------------------------------
.............................................................................................................................ACATTTATTTATTTTTTCTG.........................................................................................................201.000.00-1.00-----------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTCG.....................................................................................251.000.00--1.00----------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATCAAG....................................................................................251.000.001.00------------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTGAC..............................................................................311.000.00----1.00--------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTCATG...................................................................................261.000.001.00------------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATAAAA....................................................................................241.000.00--1.00----------------------------------------------------------------------------------
.......................................................................................................................................ATTTTTTCTATTTATTTATTTATTTATTTATTG..................................................................................331.000.00------1.00------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTCCG...............................................................................291.000.00-1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCAGTGCGC.....................................301.000.00----1.00--------------------------------------------------------------------------------
..................................................................................................................................TATTTATTTTTTCTATTTATTTATTTTTTG..........................................................................................301.000.001.00------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CAGATCACTGCAACCTCCACTCCT.......241.000.00-----------------------------------------------------1.00-------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTCTGT..........................................................................................221.000.00-------1.00-----------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATTTTTGG..............................................................................331.000.00------1.00------------------------------------------------------------------------------
............................................................................................................................................TTCTATTTATTTATTTATTTATTTATTTCG................................................................................301.000.00---1.00---------------------------------------------------------------------------------
........................................................................................................................................TTTTTTCTATTTATTTATTTCTTG..........................................................................................241.000.00---1.00---------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTATTTATTTATTTTCAAG.............................................................................311.000.00--1.00----------------------------------------------------------------------------------
..............................................................................................................................................CTATTTATTTATTTACCTG.........................................................................................191.000.001.00------------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTGATG..................................................................................271.000.00----1.00--------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTAAGTC.....................................................................................261.000.00----1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................ATCTGTCGCCCAGGCTGGAGTGCACGGC.......................................281.000.00----1.00--------------------------------------------------------------------------------
.......................................................................................................................................ATTTTTTCTATTTATTTATTTATTTTTT.......................................................................................281.000.00------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGCGATCTCAGATCAAGTG....................191.000.00-------------------1.00-----------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTCTAG..................................................................................271.000.00------1.00------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTACTAG.........................................................................................221.000.00-1.00-----------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTCATG.......................................................................................251.000.00-1.00-----------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTTTTG......................................................................................261.000.00-1.00-----------------------------------------------------------------------------------
.........................................................................................................................................TTTTTCTATTTATTTATTTATTTATTTTTTG..................................................................................311.000.00---1.00---------------------------------------------------------------------------------
...........................................................................................................................................TTTCTATTTATTTATTTATTTATTTATAG..................................................................................291.000.00-1.00-----------------------------------------------------------------------------------
...................................................................................................................................ATTTATTTTTTCTATTTATTTATT...............................................................................................2420.500.50------0.50------------------------------------------------------------------------------
..........................................................................................................................................TTTTCTATTTATTTATTTATTTATTTATTTTG................................................................................3220.500.50-0.50-----------------------------------------------------------------------------------
................................................................................................................GTATTTTTTCCCCACATT........................................................................................................................1830.330.33-----------------------------------------------------------------------------------0.33-
.......................................................................................................................................ATTTTTTCTATTTATTTATTTATTTATT.......................................................................................2830.330.33----0.33--------------------------------------------------------------------------------
.....................................................................................................................................TTATTTTTTCTATTTATTTATTT..............................................................................................2340.250.25---0.25---------------------------------------------------------------------------------
.............................................................................................................................................TCTATTTATTTATTTATTTATTTATTTTGAGAC............................................................................3340.250.25----0.25--------------------------------------------------------------------------------
............................................................................................................................................................................ACAGAGTCTCCATCTGTCGCCC........................................................2290.110.11------------------------------------------------------------------------------------0.11

Antisense strand
TCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTAAGCAGCTGGGAATGCAGAAAACACATAAGTAAAATGTCTGGCGGCGGGCTCTCAACTGTGTATTTTTTCCCCACATTTATTTATTTTTTCTATTTATTTATTTATTTATTTATTTTGAGACAGAGTCTCCATCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGATCACTGCAACCTCCACCTCTTGGGTTC
.........................................................................................................................................................................(((((...)))))....................................................................
.......................................................................................................................120...............................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787
....................................................................................................................................................................................................................................GCAACCTCCACCTCTTGGGTTGGA 241.000.00--------------------------------------------------------------------1.00----------------
................................................................................................................................................................................AGTCTCCATCTGTCGCCCAGGGG................................................... 231.000.00--------------------------------------------------------------------------1.00----------
....................................................................................................................................................................................................................................GCAACCTCCACCTCTTGGGTTGTA 241.000.00---------------------------------------------------------------------------------1.00---
............................................................GGGAATGCAGAAAACACTA........................................................................................................................................................................... 191.000.00-------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................TCTCAGATCACTGCAACCTCACG........... 231.000.00-----------------------------------------------------------------------1.00-------------
.................................................................................................................................................................................................................................AAGAGGTGGAGGTTGCAGT...... 1901.001.00------------------------------------------------------------------------------1.00------