ID: uc010gvb.1_intron_1_0_chr22_26424562_f.3p
GENE: MYO18B(2)
chr22:26426209-26426458+


(1)
AGO2.ip
(2)
B-CELL
(2)
BRAIN
(2)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(5)
HEART
(1)
HELA
(1)
KIDNEY
(2)
LIVER
(7)
OTHER
(8)
SKIN

Sense strand
GACATGCACCTGTAATCCTAGCTACTTGGGAGGCTGAAGCAGGAAGATCACTTGAACCCAGGAGCTGGAGGCTGCAGTGAGCTATGATTGCACCACTGCACACTAGCCTGAGTGACAAAGTGAGACCCTGCCTCCAGAAAAAGAAAAACCTTACCCATCCTTTGTCCCATTCATCAACTCTGACCTATGTTTGCTTCCAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAG
....................................................................................................................((((.((....(((....)))...(((......))).....)))))).......................................................................................
................................................................................................................113...............................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM532885(GSM532885)
G850N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
..............................................................................................................................................GAAAAACCTTACCCACC...........................................................................................17141.000.0069.0051.00-10.009.00-------------------1.00-1.00----------
..............................................................................................................................................GAAAAACCTTACCCACCT..........................................................................................1863.000.0030.0023.00-4.005.00----------------------------1.00---
..............................................................................................................................................GAAAAACCTTACCCACCTT.........................................................................................1944.000.0026.0016.00-1.001.00--------------------------------
..............................................................................................................................................GAAAAACCTTACCCACCA..........................................................................................1813.000.005.008.00-----------------------------------
................................................................................................................................................................................................................AAGCTGCCCTTGAAGAACTG......................205.000.00---------3.00---2.00-----------------------
................................................................................................................................................................................................................AAGCTGCCCTTGAAGAACT.......................194.000.00-------1.00---------1.00-------1.00-1.00---------
................................................................................................................................................................................................................AAGCTGCCCTTGAAGAAC........................182.000.00--------------2.00----------------------
.....................................................................................................................AAGTGAGACCCTGCCCG....................................................................................................................172.000.00--2.00----------------------------------
......................................................AACCCAGGAGCTGGAGGCTGCAGTGTAT........................................................................................................................................................................282.000.00--------2.00----------------------------
..............ATCCTAGCTACTTGGGAGGCTGAAGTGAG...............................................................................................................................................................................................................292.000.00--2.00----------------------------------
.......................................................ACCCAGGAGCTGGAGGCTGCAGCG...........................................................................................................................................................................242.000.00-----2.00-------------------------------
..............................................................AGCTGGAGGCTGCAGTGAGTTG......................................................................................................................................................................222.000.00--2.00----------------------------------
......................................................AACCCAGGAGCTGGAGGCTGCAGTGT..........................................................................................................................................................................261.000.00---------------1.00---------------------
...........................................................AGGAGCTGGAGGCTGCAGTGAACTG......................................................................................................................................................................251.000.00--1.00----------------------------------
.......................ACTTGGGAGGCTGAAGCAGGTGGC...........................................................................................................................................................................................................241.000.00-----------------------------1.00-------
..............ATCCTAGCTACTTGGGAGG.........................................................................................................................................................................................................................1901.001.00------------1.00------------------------
.......................ACTTGGGAGGCTGAAGCAGGAAGCCT.........................................................................................................................................................................................................261.000.00--1.00----------------------------------
......................................................AACCCAGGAGCTGGAGGCTGCAGTGAGCG.......................................................................................................................................................................291.000.00-----1.00-------------------------------
..............................................................................................................................................................................................................TGAAGCTGCCCTTGAAGACTTCC.....................2311.001.00-----------1.00-------------------------
...................................................................................................................................................................................................................CTGCCCTTGAAGACTTCGCA...................201.000.00----------------------------1.00--------
.......................................................................................................................................................................................................GCCTCCTTGAAGCTGCCCTTGAAGACTTC......................2911.001.00-------------------------------1.00-----
..............................................................................................................................................GAAAAACCTTACCCACCCT.........................................................................................191.000.001.00------------------------------------
......................................................................................................................................................................................................AGCCTCCTTGAAGCTGCCCTTGAAGAC.........................2711.001.00------1.00------------------------------
....................................................................AGGCTGCAGTGAGCTATGAATAG...............................................................................................................................................................231.000.00----------------------1.00--------------
...........................................................................................................................................................CATCCTTTGTCCCATACC.............................................................................181.000.00---1.00---------------------------------
.........................................................................................................................................................................................................................TTGAAGACTTCCCGACTCT..............1911.001.00-----------1.00-------------------------
...........................................................AGGAGCTGGAGGCTGCAGTGAGCCCCG....................................................................................................................................................................271.000.00--1.00----------------------------------
...........................................................................................................CTGAGTGACAAAGTGAGACCCTGGCT.....................................................................................................................261.000.00-------------------1.00-----------------
...........................................................AGGAGCTGGAGGCTGCAGTGAGGTG......................................................................................................................................................................251.000.00--1.00----------------------------------
................................................................................................................................................................................................................AAGCTGCCCTTGAAGACCTGT.....................211.000.00--------1.00----------------------------
...................................................TTGAACCCAGGAGCTGGAGGCTGCAGCG...........................................................................................................................................................................281.000.00-----1.00-------------------------------
...........................................................................................................CTGAGTGACAAAGTGATAAC...........................................................................................................................201.000.00-------1.00-----------------------------
............................................................................................................................................................................................................................AAGACTTCCCGACTCTACAATA........2211.001.00------1.00------------------------------
....................GCTACTTGGGAGGCTGAAGGCGG...............................................................................................................................................................................................................231.000.00----------------1.00--------------------
..CATGCACCTGTAATCCTCTG....................................................................................................................................................................................................................................201.000.00--------------------------------1.00----
..........................TGGGAGGCTGAAGCAGGAAGATCACA......................................................................................................................................................................................................261.000.00-----1.00-------------------------------
.......................ACTTGGGAGGCTGAAGCAGGAAGATCACCT.....................................................................................................................................................................................................301.000.00-----1.00-------------------------------
............................................................................................................................................................................................................................AAGACTTCCCGACTCTACAATAACTTGG..2811.001.00------1.00------------------------------
.............................................................GAGCTGGAGGCTGCAGTGTC.........................................................................................................................................................................201.000.00------------------1.00------------------
..............ATCCTAGCTACTTGGGAGGCGGTC....................................................................................................................................................................................................................241.000.00-----1.00-------------------------------
...........................................................AGGAGCTGGAGGCTGCAGTGACCC.......................................................................................................................................................................241.000.00--1.00----------------------------------
.....................CTACTTGGGAGGCTGAAGCAGGAAGATCACC......................................................................................................................................................................................................311.000.00--1.00----------------------------------

Antisense strand
GACATGCACCTGTAATCCTAGCTACTTGGGAGGCTGAAGCAGGAAGATCACTTGAACCCAGGAGCTGGAGGCTGCAGTGAGCTATGATTGCACCACTGCACACTAGCCTGAGTGACAAAGTGAGACCCTGCCTCCAGAAAAAGAAAAACCTTACCCATCCTTTGTCCCATTCATCAACTCTGACCTATGTTTGCTTCCAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAG
....................................................................................................................((((.((....(((....)))...(((......))).....)))))).......................................................................................
................................................................................................................113...............................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM532885(GSM532885)
G850N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.....................................................................GGCTGCAGTGAGCTATGATGACC.............................................................................................................................................................. 233.000.00-----3.00-------------------------------
.................................................................................................................................................................................................CTTCCAGCCTCCTTGTCAA...................................... 192.000.00----------2.00--------------------------
............................GGAGGCTGAAGCAGGAAGATGAG....................................................................................................................................................................................................... 231.000.00--1.00----------------------------------
...............................................................GCTGGAGGCTGCAGTGAGCTACTC................................................................................................................................................................... 241.000.00--1.00----------------------------------
....................................AAGCAGGAAGATCACTGAC................................................................................................................................................................................................... 191.000.00--1.00----------------------------------
.........................................................................GCAGTGAGCTATGATTGCAC............................................................................................................................................................. 201.000.00---------------------1.00---------------
...ATGCACCTGTAATCCTAGTCC.................................................................................................................................................................................................................................. 211.000.00------------------------------1.00------
............................................................GGAGCTGGAGGCTGCAGTGAGCTAGGAC.................................................................................................................................................................. 281.000.00--1.00----------------------------------
...........................................................AGGAGCTGGAGGCTGCAGTGAGCTCGGC................................................................................................................................................................... 281.000.00-----1.00-------------------------------
.............................................................GAGCTGGAGGCTGCAGTGAGGG....................................................................................................................................................................... 221.000.00-----1.00-------------------------------
.........................................................CTGCAGCCTCCAGCTCCTGG............................................................................................................................................................................. 2001.001.00------------1.00------------------------
.........................................................................................................................GAGACCCTGCCTCCAGAAAAGCCC......................................................................................................... 241.000.00---------------1.00---------------------
.....................................................................................................................................CCAGAAAAAGAAAAACCTTG................................................................................................. 201.000.00--1.00----------------------------------
........................................................................................................................................GAAAAAGAAAAACCTGAG................................................................................................ 181.000.00-----1.00-------------------------------
.........................................................................................................................GAGACCCTGCCTCCAGAAAAG............................................................................................................ 211.000.00--------------------1.00----------------
.................................................................................................................................................................................................CTTCCAGCCTCCTTGTCAT...................................... 191.000.00-------1.00-----------------------------
............................................AGATCACTTGAACCCAGGACAGA....................................................................................................................................................................................... 231.000.00-----------------------1.00-------------
......................................................................................................................CTGGAGGCAGGGTCTCACT................................................................................................................. 1970.140.14-----------------------------------0.14-
............................................................................................................................................................................................................AAGGGCAGCTTCAAG............................... 1590.110.11------------------------------------0.11