ID: uc010ggi.2_intron_7_0_chr20_40735562_r.5p
GENE: (8)
chr20:40738773-40739022-


(2)
AGO1.ip 		(2)
AGO2.ip 		(2)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(20)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(2)
HELA 		(4)
LIVER 		(2)
OTHER 		(7)
SKIN 		(1)
XRN.ip

Sense strand
GTCAAGTTCCTCAACCCCCCGGAAGCTGGGCCCATAGTGGTCCACTGCAGGTAAGTCAAAGGTCCTTCACCTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTGGTGAAACCTCGTCTCTACTAAAGAAAGATACAAAAACTTAGCTGGTCATGGTGGCATACATCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGAGGAATCGCTTGAACCCAGGAGCG
.................................................................(((.((((((....)))))).)))...((((((.(((((((.(((...)))...)))))))..))))))....................................................................................................................
...............................................................64.......................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189786SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR189785SRR038858(GSM458541)
MEL202. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
................................................................................................................AGACCAGCCTGGCCAACGGCG.....................................................................................................................2138.000.0032.005.00----1.00-----------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCA.....................................................................................................................2130.000.0025.004.00----1.00-----------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................2426.000.0010.0016.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................2515.000.009.006.00----------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGC......................................................................................................................2010.000.0010.00-----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGCA.....................................................................................................................2410.000.003.007.00----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGC......................................................................................................................2310.000.006.004.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGCA.....................................................................................................................259.000.006.003.00----------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCGA....................................................................................................................228.000.008.00-----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................278.000.007.001.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGC......................................................................................................................248.000.007.001.00----------------------------------------------
.........................................................................................................GAGTTCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................284.000.003.001.00----------------------------------------------
...............................................................................................................GAGACCAGCCTGGCCAACGGCG.....................................................................................................................224.000.003.001.00----------------------------------------------
.....................................................................................................TCAGGAGTTCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................324.000.003.001.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGACG.....................................................................................................................253.000.002.001.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGCA.....................................................................................................................273.000.002.001.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGAC......................................................................................................................243.000.001.002.00----------------------------------------------
.....................................................................................................TCAGGAGTTCGAGACCAGCCTGGCCAACGCTG.....................................................................................................................323.000.003.00-----------------------------------------------
.............................................................................................TCACGAGGTCAGGAGTTCGAGACCAGCCGGCC.............................................................................................................................323.000.00-3.00----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCTAG.......................292.000.002.00-----------------------------------------------
..................................................................................................................ACCAGCCTGGCCAACGGCG.....................................................................................................................192.000.002.00-----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGGCG....................................................................................................................252.000.002.00-----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGCCG..............................................................................................................................................................242.000.001.001.00----------------------------------------------
..................................................................................................................................................................................................TGTAATCCCAGCTACCTGGGAGGCTGAGGGACG.......................332.000.002.00-----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGACG.....................................................................................................................242.000.00-2.00----------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCAA....................................................................................................................222.000.002.00-----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGATG.....................................................................................................................252.000.00-2.00----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCGT........................282.000.00-2.00----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGTAA....................................................................................................................252.000.00-2.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGC......................................................................................................................262.000.002.00-----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGCGA....................................................................................................................262.000.00-2.00----------------------------------------------
........................................................................................................GGAGTTCGAGACCAGCCTGGCCAACGGC......................................................................................................................282.000.002.00-----------------------------------------------
...................................................................CACCTTGGGAGGCCGAGGCGGCACC..............................................................................................................................................................252.000.002.00-----------------------------------------------
...................................................................CACCTTGGGAGGCCGAGGCGGGCAGAGCC..........................................................................................................................................................292.000.002.00-----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGATG.....................................................................................................................242.000.001.001.00----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGCGA....................................................................................................................252.000.002.00-----------------------------------------------
..........................................................................................................................................................................................................................TGAGGCAGAGGAATCGCTCGCT..........222.000.00------------------------1.00----------1.00------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGACG.....................................................................................................................272.000.002.00-----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGCGCG....................................................................................................................262.000.00-2.00----------------------------------------------
....................................................................................................................................................................................................TAATCCCAGCTACCTGGGAGGCTGAGGCGCG.......................312.000.00-2.00----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCACGTG.....................311.000.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGGTTGC.................261.000.001.00-----------------------------------------------
.............................................................................................TCACGAGGTCAGGAGTTCGAGACCAGCCGACC.............................................................................................................................321.000.001.00-----------------------------------------------
....................................................................................................................................................................................................TAATCCCAGCTACCTGGGAGCGAG..............................241.000.00-----------------------------1.00------------------
....................................................................ACCTTGGGAGGCCGAGGCGGCGA...............................................................................................................................................................231.000.001.00-----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCAGCAGG....................321.000.00-1.00----------------------------------------------
.......................................................................................................AGGAGTTCGAGACCAGCCTGGCCAACGGTAA....................................................................................................................311.000.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGGAC...................241.000.00-1.00----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGCAGGGC...........................................................................................................................................................271.000.001.00-----------------------------------------------
..................................................................................................................................................................................................................TGGGAGGCTGAGGCAGAG......................1801.001.00---1.00--------------------------------------------
................................................................................................CGAGGTCAGGAGTTCGAGACCAGCCGGTC.............................................................................................................................291.000.001.00-----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGGCAGG.................261.000.001.00-----------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCC.....................................................................................................................211.000.001.00-----------------------------------------------
...........................................................................................................GTTCGAGACCAGCCTGGCCAACGGCG.....................................................................................................................261.000.001.00-----------------------------------------------
...............................................................................................................................................................................................ATCTGTAATCCCAGCTACCTGGGAGTGG...............................281.000.001.00-----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGGCAG.............................................................................................................................................................251.000.001.00-----------------------------------------------
.......................................................................................................AGGAGTTCGAGACCAGCCTGGCCAACGCT......................................................................................................................291.000.001.00-----------------------------------------------
...................................................................CACCTTGGGAGGCCGAGGCGGGCAGATG...........................................................................................................................................................281.000.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGTAC.....................221.000.001.00-----------------------------------------------
...............................................................................................ACGAGGTCAGGAGTTCGAGACCAGCCGGTC.............................................................................................................................301.000.00-1.00----------------------------------------------
.........................................................................GGGAGGCCGAGGCGGGCAGACCCC.........................................................................................................................................................241.000.00-1.00----------------------------------------------
..................................................................................................................................................................................................................................AGGAATCGCTTGAACCC.......1701.001.00---1.00--------------------------------------------
..........TCAACCCCCCGGAAGCTG..............................................................................................................................................................................................................................1811.001.00----------1.00-------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCAGTGG.....................311.000.00-1.00----------------------------------------------
.....................................................................................CGGGCAGATCACGAGGTCAGGAGT.............................................................................................................................................2401.001.00----------------1.00-------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCGTG.......................291.000.00-1.00----------------------------------------------
.............................................................................................TCACGAGGTCAGGAGTTCGAGACCAGCCTCCC.............................................................................................................................321.000.00-1.00----------------------------------------------
..................................................................TCACCTTGGGAGGCCGAGGCGGGAG...............................................................................................................................................................251.000.001.00-----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGAGA....................................................................................................................251.000.00-1.00----------------------------------------------
...................................................................................................GGTCAGGAGTTCGAGACCAGCCTGGCGCCC.........................................................................................................................301.000.001.00-----------------------------------------------
........................................................................TGGGAGGCCGAGGCGGGCAGCGC...........................................................................................................................................................231.000.00-1.00----------------------------------------------
...............................................................................................ACGAGGTCAGGAGTTCGAGACCAGCCGGC..............................................................................................................................291.000.00-1.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGCCA....................................................................................................................261.000.001.00-----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCACAGG.....................311.000.00-1.00----------------------------------------------
...................................................................................................................................GGTGAAACCTCGTCTATC.....................................................................................................181.000.00---------------------1.00--------------------------
....................................................................................GCGGGCAGATCACGAGGTCATTTT..............................................................................................................................................241.000.00----------------------------------------1.00-------
.......................................................................................................................................................................................................TCCCAGCTACCTGGGAGGCTGAGGGACG.......................281.000.00-1.00----------------------------------------------
.......................................................................TTGGGAGGCCGAGGCGGGCAGAGACC.........................................................................................................................................................261.000.00-1.00----------------------------------------------
......................................................................................................................................................................................................................AGGCTGAGGCAGAGGAATCGCGTG............241.000.00-------------------------------------1.00----------
................................................................................................................AGACCAGCCTGGCCAACGGTGC....................................................................................................................221.000.001.00-----------------------------------------------
.......................................................................................................AGGAGTTCGAGACCAGCCTGGCCAACGAC......................................................................................................................291.000.001.00-----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGTGCG....................................................................................................................261.000.00-1.00----------------------------------------------
................................................................................................................................................................................................................CCTGGGAGGCTGAGGCAGTCAG....................221.000.001.00-----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGATG.....................................................................................................................271.000.00--------------------------------------------1.00---
...................................................................CACCTTGGGAGGCCGAGGCGGGCC...............................................................................................................................................................241.000.001.00-----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCGGCC......................211.000.001.00-----------------------------------------------
..................................................................................................................................................................................................TGTAATCCCAGCTACCTGGGAGGCGAG.............................271.000.001.00-----------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGACA....................................................................................................................221.000.00-1.00----------------------------------------------
....................................................................................................................................................................................................................................GAATCGCTTGAACCCAGGAGCT221.000.00--------------------------1.00---------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGCCC..............................................................................................................................................................241.000.00-1.00----------------------------------------------
..........................................................................................................................................................................................................................TGAGGCAGAGGAATCGCTAGCG..........221.000.00-------------------------------------------1.00----
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCCGAC............................241.000.001.00-----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGGGT..............................................................................................................................................................241.000.00-1.00----------------------------------------------
....................................................................................................................................................................................................TAATCCCAGCTACCTGGGAGGCTGAGGGGGG.......................311.000.00-1.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGAC......................................................................................................................261.000.001.00-----------------------------------------------
.......................................................................TTGGGAGGCCGAGGCGGGCATGCC...........................................................................................................................................................241.000.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGGAATCGC...............2811.001.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGATTG....................231.000.00-1.00----------------------------------------------
...................................................................CACCTTGGGAGGCCGAGGCGGGGGGC.............................................................................................................................................................261.000.00-1.00----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCGGAG......................301.000.00-1.00----------------------------------------------
.......................................................................................................................................................................................................TCCCAGCTACCTGGGAGGCTGAGGCAGAAC.....................301.000.00-1.00----------------------------------------------
.....................................................................................................TCAGGAGTTCGAGACCAGCCTGGCCAACGATG.....................................................................................................................321.000.001.00-----------------------------------------------
......................................................................CTTGGGAGGCCGAGGCGGGCAGAAC...........................................................................................................................................................251.000.00-1.00----------------------------------------------
.............................................................................................................TCGAGACCAGCCTGGCCAACGGCAA....................................................................................................................251.000.00-1.00----------------------------------------------
..........................................................................................AGATCACGAGGTCAGGAGTTCG..........................................................................................................................................2201.001.00----------------1.00-------------------------------
....................................................................................GCGGGCAGATCACGAGTCT...................................................................................................................................................191.000.00-1.00----------------------------------------------
...............................................................................................................................................................ATACAAAAACTTAGCTGCTA.......................................................................201.000.00-------1.00----------------------------------------
........................................................................TGGGAGGCCGAGGCGGGCAGACCCC.........................................................................................................................................................251.000.00-1.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGCGA....................................................................................................................281.000.00-1.00----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCAGCGG.....................311.000.00-1.00----------------------------------------------
................................................................................................................................................................................................TCTGTAATCCCAGCTACGC.......................................191.000.00-------------1.00----------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGTGTGC...................................................................................................................291.000.00-1.00----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGGT...............................................................................................................................................................231.000.001.00-----------------------------------------------
.............................................................................................................................................................................................................CTACCTGGGAGGCTGAGGCTAGG......................231.000.00-1.00----------------------------------------------
................................................................................................CGAGGTCAGGAGTTCGAGAGCAG...................................................................................................................................231.000.00-------------------------------1.00----------------
.......................................................................TTGGGAGGCCGAGGCGGGCAGTCTG..........................................................................................................................................................251.000.00-1.00----------------------------------------------
........................................................................TGGGAGGCCGAGGCGGGCAGATCACGAGCC....................................................................................................................................................301.000.001.00-----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGCTG.....................................................................................................................251.000.001.00-----------------------------------------------
...............................................................................................ACGAGGTCAGGAGTTCGAGACCAGCCCAC..............................................................................................................................291.000.001.00-----------------------------------------------
..................................................................TCACCTTGGGAGGCCGAGGCGGGCGG..............................................................................................................................................................261.000.001.00-----------------------------------------------
.....................................................................................................TCAGGAGTTCGAGACCAGCCTGGCCAACGGCA.....................................................................................................................321.000.001.00-----------------------------------------------
......................................................................................................................................................................................................ATCCCAGCTACCTGGGAGGCTGAGGCTAGG......................301.000.001.00-----------------------------------------------
........................................................................TGGGAGGCCGAGGCGGGCAGCAGG..........................................................................................................................................................241.000.00-1.00----------------------------------------------
.......................................................................................................AGGAGTTCGAGACCAGCCTGGCCAACGGTC.....................................................................................................................301.000.00-1.00----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCACGCG.....................221.000.00-1.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGAGG....................................................................................................................281.000.001.00-----------------------------------------------
...............................................................................................ACGAGGTCAGGAGTTCGAGACCAGCCGAAC.............................................................................................................................301.000.00-1.00----------------------------------------------
..................................................................................AGGCGGGCAGATCACGAGGTCAGGAGCAC...........................................................................................................................................291.000.00-1.00----------------------------------------------
...............................................................................................ACGAGGTCAGGAGTTCGAGACCAGCCGAGC.............................................................................................................................301.000.00-1.00----------------------------------------------
............................................................................................................TTCGAGACCAGCCTGGCCAACGGTA.....................................................................................................................251.000.00-1.00----------------------------------------------
..............................................................................................................................................................................................................TACCTGGGAGGCTGAGGCGGGT......................221.000.00-1.00----------------------------------------------
...........................................................................................................................................................................................................AGCTACCTGGGAGGCTGAGGCAGCGG.....................261.000.001.00-----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGCAGAG............................................................................................................................................................261.000.001.00-----------------------------------------------
.........................................................................................................................TGGCCAACGTGGTGAAACCTCG...........................................................................................................2201.001.00---1.00--------------------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCT.....................................................................................................................211.000.00-1.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGGCTC....................................................................................................................281.000.00-1.00----------------------------------------------
......................................................................CTTGGGAGGCCGAGGCGGGCCA..............................................................................................................................................................221.000.001.00-----------------------------------------------
...........................................................................................................................................................................................................AGCTACCTGGGAGGCTGAGGCACAGG.....................261.000.00-1.00----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGGGGG.............................................................................................................................................................251.000.001.00-----------------------------------------------
..................................................................................................................................................................................................................TGGGAGGCTGAGGCAGAGGGGG..................221.000.00-1.00----------------------------------------------
.......................................................................TTGGGAGGCCGAGGCGGGCAGTAA...........................................................................................................................................................241.000.00----------------------------1.00-------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGTTGC..................251.000.00-1.00----------------------------------------------
..................................................................................................................................................................................................................TGGGAGGCTGAGGCAGAGGAATCGCC..............261.000.00-1.00----------------------------------------------
.............................................................................................................................................................................................................CTACCTGGGAGGCTGAGGCGACT......................231.000.00-----------------1.00------------------------------
................................................................................................................AGACCAGCCTGGCCAACGGCGG....................................................................................................................221.000.001.00-----------------------------------------------
..............................................................................................................CGAGACCAGCCTGGCCAACGGCGA....................................................................................................................241.000.001.00-----------------------------------------------
..................................................................................................................................TGGTGAAACCTCGTCTCTACCAAG................................................................................................241.000.001.00-----------------------------------------------
.............................................................................................TCACGAGGTCAGGAGTTCGAGACCAGCCGAGC.............................................................................................................................321.000.001.00-----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCACGCC.....................221.000.001.00-----------------------------------------------
..................................................................................................................................................................................................................TGGGAGGCTGAGGCAGAGGAACCG................241.000.001.00-----------------------------------------------
..................................................................................AGGCGGGCAGATCACGAGGTCAGGGCC.............................................................................................................................................271.000.001.00-----------------------------------------------
....................................................................ACCTTGGGAGGCCGAGGCGGGCAGCTC...........................................................................................................................................................271.000.001.00-----------------------------------------------
............................................................................................ATCACGAGGTCAGGAGTTCGAGACCAGCCGGC..............................................................................................................................321.000.001.00-----------------------------------------------
........................................................................................GCAGATCACGAGGTCAGGAGTTCGAGACTAA...................................................................................................................................311.000.00------------------------------------------1.00-----
.............................................................................................................TCGAGACCAGCCTGGCCAACGGCGG....................................................................................................................251.000.001.00-----------------------------------------------
..................................................................................AGGCGGGCAGATCACGAGCAGG..................................................................................................................................................221.000.001.00-----------------------------------------------
..................................................................TCACCTTGGGAGGCCGAGGCGGGCAG..............................................................................................................................................................2611.001.00-1.00----------------------------------------------
.................................................................................................................................................................................................................CTGGGAGGCTGAGGCAGAGGAATCGCTTG............2920.500.500.50-----------------------------------------------
..............................................................................................................................................................................................................TACCTGGGAGGCTGAGGCAGAGG.....................2370.290.29-0.29----------------------------------------------
....................................................................................................................................................................................................TAATCCCAGCTACCTGGGAGGCTGAGGCAGAGG.....................3340.250.25-0.25----------------------------------------------
.......................................................................................................................................................................................................TCCCAGCTACCTGGGAGGCTGAGGCAGAGG.....................3040.250.25-0.25----------------------------------------------
...............................................................................................................................................................................................................ACCTGGGAGGCTGAGGCAGAGGAA...................2440.250.25-----------------------------------------------0.25
.................................................................................................................................................................................................................CTGGGAGGCTGAGGCAGAGGAATC.................2460.170.17-----------------0.17------------------------------
.............................................................................................................................................................................................ACATCTGTAATCCCAGCTACCTGGGAGGC................................2990.110.110.11-----------------------------------------------

Antisense strand
GTCAAGTTCCTCAACCCCCCGGAAGCTGGGCCCATAGTGGTCCACTGCAGGTAAGTCAAAGGTCCTTCACCTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTGGTGAAACCTCGTCTCTACTAAAGAAAGATACAAAAACTTAGCTGGTCATGGTGGCATACATCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGAGGAATCGCTTGAACCCAGGAGCG
.................................................................(((.((((((....)))))).)))...((((((.(((((((.(((...)))...)))))))..))))))....................................................................................................................
...............................................................64.......................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189786SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR189785SRR038858(GSM458541)
MEL202. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
.....................................................................................CGGGCAGATCACGAGGTCAAAA............................................................................................................................................... 227.000.00----3.00---2.00-1.00----1.00--------------------------------
.................................................................................................................GACCAGCCTGGCCAACGTAATC................................................................................................................... 227.000.00--7.00---------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAA................................................................................................................................................ 227.000.00---------2.00--1.00-----------------1.00-1.00-----1.001.00--------
.....................................................................................CGGGCAGATCACGAGGTCAAA................................................................................................................................................ 213.000.00----2.00--------------1.00----------------------------
..........................................................................................AGATCACGAGGTCAGGAGTTCGCTG....................................................................................................................................... 2503.000.00-----2.00-------------------1.00----------------------
.....................................................................CCTTGGGAGGCCGAGGCGGGCACGC............................................................................................................................................................ 253.000.003.00-----------------------------------------------
.............................................................................................................................CAACGTGGTGAAACCTCGTCTCTACTCTC................................................................................................ 292.000.00-2.00----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAAGA.............................................................................................................................................. 242.000.00---1.00-----------1.00--------------------------------
.....................................................................................CGGGCAGATCACGAGGTCAGAAT.............................................................................................................................................. 232.000.00--------------2.00---------------------------------
.......................................................................................................................................................................................................................GGCTGAGGCAGAGGAATCGCTCCCC.......... 252.000.002.00-----------------------------------------------
.............................................................................................................................................CGTCTCTACTAAAGAAAGATGGG...................................................................................... 232.000.00-2.00----------------------------------------------
................................................................................................................................CGTGGTGAAACCTCGTCTCTACTCTCG............................................................................................... 272.000.002.00-----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAACCTGCTC......................................................................................................... 302.000.00-2.00----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGCCC................................................................................................................ 232.000.00-2.00----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAAC............................................................................................................................................... 232.000.00-----------2.00------------------------------------
.....................................................................................CGGGCAGATCACGAGGTCAA................................................................................................................................................. 202.000.00---2.00--------------------------------------------
......................................................................................................................GCCTGGCCAACGTGGTGAAACCTGGG.......................................................................................................... 262.000.001.00-----1.00-----------------------------------------
............................................................................AGGCCGAGGCGGGCAGATCAGAAA...................................................................................................................................................... 241.000.00-------1.00----------------------------------------
.......................................................................................................................CCTGGCCAACGTGGTGAAGCTC............................................................................................................. 221.000.001.00-----------------------------------------------
....................................................................................................................................................................................................................GGAGGCTGAGGCAGAGGAATCGCTTTGAT......... 291.000.00---------------------------------------------1.00--
.....................................................................................................................................................................................................................GAGGCTGAGGCAGAGGAATCGCTTGC........... 261.000.001.00-----------------------------------------------
......................................................................................................................GCCTGGCCAACGTGGTGAAACCTCGTCTCGG..................................................................................................... 311.000.001.00-----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAAA............................................................................................................................................... 231.000.00-----------------------------------------1.00------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGTTCGG................................................................................................................... 291.000.001.00-----------------------------------------------
.......................................................................................................................CCTGGCCAACGTGGTGAAAGTC............................................................................................................. 221.000.001.00-----------------------------------------------
.................................................................................................................GACCAGCCTGGCCAACGTGGTGGGA................................................................................................................ 251.000.001.00-----------------------------------------------
........................................................................................................................................AACCTCGTCTCTACTAAAGAGCAC.......................................................................................... 241.000.00-1.00----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAGCCC............................................................................................................. 261.000.00-1.00----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAACCTGA........................................................................................................... 281.000.00-1.00----------------------------------------------
.......................................................................................................................................AAACCTCGTCTCTACTAAAC............................................................................................... 201.000.00----------------------1.00-------------------------
................................................................................................................................CGTGGTGAAACCTCGTCTCTACTCACC............................................................................................... 271.000.00-1.00----------------------------------------------
..................................................................................................................................................................................................................TGGGAGGCTGAGGCAGAGGAATAT................ 241.000.001.00-----------------------------------------------
......................................................................CTTGGGAGGCCGAGGCGGGCAGATCGCT........................................................................................................................................................ 281.000.001.00-----------------------------------------------
........................................................................................................................CTGGCCAACGTGGTGAAACCTCGTCTCTCG.................................................................................................... 301.000.001.00-----------------------------------------------
...............................................................................................................GAGACCAGCCTGGCCAACGTGGTGCCC................................................................................................................ 271.000.00-----1.00------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAACGGGC........................................................................................................... 281.000.001.00-----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGCTA................................................................................................................... 201.000.00-1.00----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAACCTG............................................................................................................ 271.000.001.00-----------------------------------------------
.................................................................................................................GACCAGCCTGGCCAACGTGGTGAGCCC.............................................................................................................. 271.000.001.00-----------------------------------------------
....................................................................................................................................................................................................................GGAGGCTGAGGCAGAGGAATCGCTTGAGAG........ 301.000.00-1.00----------------------------------------------
..........................................................................................................AGTTCGAGACCAGCCTGGCCAACGTTTC.................................................................................................................... 281.000.001.00-----------------------------------------------
.....................................................................................CGGGCAGATCACGAGGTCAATA............................................................................................................................................... 221.000.00--------------------1.00---------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAAGGTT............................................................................................................ 271.000.00-1.00----------------------------------------------
........................................................................................................................................AACCTCGTCTCTACTAAACCG............................................................................................. 211.000.00-1.00----------------------------------------------
.............................................................................GGCCGAGGCGGGCAGATCACGAGGTCCA................................................................................................................................................. 281.000.00-1.00----------------------------------------------
..................................................................................................................ACCAGCCTGGCCAACGTGGTGAGGG............................................................................................................... 251.000.00-1.00----------------------------------------------
......................................................................................................................................................................................................................AGGCTGAGGCAGAGGAATCGCTGA............ 241.000.001.00-----------------------------------------------
....................................................................................................................CAGCCTGGCCAACGTGGTGAAACCCC............................................................................................................ 261.000.001.00-----------------------------------------------
............................................................................AGGCCGAGGCGGGCAGATCACGAGGTTCCG................................................................................................................................................ 301.000.001.00-----------------------------------------------
.................................................................................GAGGCGGGCAGATCACGAGGTCTCT................................................................................................................................................ 251.000.00---------------------------1.00--------------------
......................................................................................................................GCCTGGCCAACGTGGTGAAACCTCGGGG........................................................................................................ 281.000.001.00-----------------------------------------------
......................................................................................................CAGGAGTTCGAGACCAGCCTGGCCAACGTCGC.................................................................................................................... 321.000.00-1.00----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAAT............................................................................................................................................... 231.000.00---------------------------------1.00--------------
.............................................................................GGCCGAGGCGGGCAGATCACGACCA.................................................................................................................................................... 251.000.001.00-----------------------------------------------
...............................................................................................................GAGACCAGCCTGGCCAACGTGGTGG.................................................................................................................. 251.000.00----------------------------------1.00-------------
......................................................................................................................................................................................................................AGGCTGAGGCAGAGGAATCGCTGCCG.......... 261.000.001.00-----------------------------------------------
......................................................................................................................................................................................................................AGGCTGAGGCAGAGGAATCGCTGGG........... 251.000.001.00-----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAAGAA.............................................................................................................................................. 241.000.00----1.00-------------------------------------------
..........................................................................................AGATCACGAGGTCAGGAGTTCGAGCTG..................................................................................................................................... 271.000.00------------------------------------1.00-----------
............................................................................AGGCCGAGGCGGGCAGATCACGAA...................................................................................................................................................... 241.000.00------------1.00-----------------------------------
........................................................................................................................................AACCTCGTCTCTACTAAAAA.............................................................................................. 201.000.00------------------1.00-----------------------------
................................................................................CGAGGCGGGCAGATCACGAGGTCCCC................................................................................................................................................ 261.000.001.00-----------------------------------------------
.............................................................................................................................CAACGTGGTGAAACCTCGTCTCTC..................................................................................................... 241.000.001.00-----------------------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGCC................................................................................................................. 221.000.00-1.00----------------------------------------------
.........CTCAACCCCCCGGAATGG............................................................................................................................................................................................................................... 181.000.00-----------------------1.00------------------------
..................................................................................................................ACCAGCCTGGCCAACGTGGTTGG................................................................................................................. 231.000.001.00-----------------------------------------------
....................................................................................GCGGGCAGATCACGAGGTCAA................................................................................................................................................. 211.000.00-------------1.00----------------------------------
...................................................................................................................CCAGCCTGGCCAACGTGGTGAAAAAC............................................................................................................. 261.000.001.00-----------------------------------------------
................................................................................................................................................................................................................ATTCCTCTGCCTCAGCCTCCCAGG.................. 2450.800.800.400.40----------------------------------------------
............................................................CTCCCAAGGTGAAGGACC............................................................................................................................................................................ 1820.500.50----------------------------------------------0.50-
........................................................................................................................................................................................................CCTCTGCCTCAGCCTCCCAGGTAGCTGGG..................... 2940.250.250.25-----------------------------------------------
.................................................................................................................................................................................................................ATTCCTCTGCCTCAGCCTCCCAG.................. 2360.170.170.17-----------------------------------------------
.................................................................................................................................................................................................................CTGGGAGGCTGAGGCAGAGGAATAG................ 250.170.00-0.17----------------------------------------------
................................................................................................................................................................................................................TCCTCTGCCTCAGCCTCCCAGG.................... 2260.170.170.17-----------------------------------------------
.................................................................................................................................................................................................................CTGGGAGGCTGAGGCAGAGGAATT................. 240.170.00-0.17----------------------------------------------
................................................................................................................................................................................................................CCTCTGCCTCAGCCTCCCAGG..................... 2180.120.120.12-----------------------------------------------