ID: uc010gcx.2_intron_1_0_chr20_20392793_r.3p
GENE: (29)
chr20:20392743-20392992-


(12)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(6)
LIVER 		(1)
OTHER 		(18)
SKIN

Sense strand
AGTCTAAGAGAAACTTAGGTCTCAAAACCAGAATTTGGGTATGAATTATGACTAATACTTAATTTTCTGCAAGATGGTAAAGAACCTGCAGGATACTTTTTTACACAGAAAAAATTGCACAACGGTATTAAAAGTGAATTCTGTCACTGCTCTGCATGCCACTTTGCACGTGCACTTGTTTCCTTAACCGATTACCGCAGCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCG
....................................................................((......((((((((((....))....))))))))...((((.((.(((((............(((((......)))))....((((........)))).))))).)).))))..............))....................................................
....................................................................69.................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
...................................................................................................................................................................................TTCCTTAACCGATTACCGCAGA.................................................22119.003.002.001.00---2.00-1.00---1.00--1.001.00-1.00-1.00---1.00----1.00----1.00---1.00-------1.00-1.001.001.00-
..................................................................................................................................................................................TTTCCTTAACCGATTACCGCAGA.................................................23110.001.001.00----------1.00---------1.00------------1.00-1.00--1.001.001.00--1.00-----1.00
..................................................................................................................................................................................TTTCCTTAACCGATTACCGCAGAA................................................2417.001.00--3.00---2.00----------------------1.001.00--------------------
...................................................................................................................................................................................TTCCTTAACCGATTACCGCAG..................................................2113.003.001.00-----------------------1.00-------------1.00------------
.........................................................................................................................................................................................................TATGAAGAGCGAGCTCTGT..............................1912.002.00----------2.00----------------------------------------
................................ATTTGGGTATGAATTATGAAA.....................................................................................................................................................................................................212.000.00--------2.00------------------------------------------
...................................................................................................................................................................................TTCCTTAACCGATTACCGCAGAA................................................2312.003.00---------1.00---------------------------------1.00-------
..................................................................................................................................................................................................................................AAGCAATAATTCAGATGT......182.000.00----2.00----------------------------------------------
........................................................................................................................AACGGTATTAAAAGTGAATTCTGTCACTGCT...................................................................................................3111.001.00--------------------------1.00------------------------
.................................................................................................................................................................................GTTTCCTTAACCGATTACCGCAG..................................................2311.001.00-------1.00-------------------------------------------
..................................................................................................................................................................................................................CGAGCTCTGTATCTCGAAGCAATAATTCA...........2911.001.00------------------------------------------1.00--------
..................................................................................................................................................................................TTTCCTTAACCGATTACCGCAGCTATGAAGAGC.......................................3311.001.00---------1.00-----------------------------------------
.............................AGAATTTGGGTATGAATTATGAC......................................................................................................................................................................................................2311.001.00-1.00-------------------------------------------------
..........................................................................................................................................................................................................ATGAAGAGCGAGCTCTGT..............................1811.001.00-------------1.00-------------------------------------
.........................................................................ATGGTAAAGAACCTGCAGGATAC..........................................................................................................................................................2311.001.00-1.00-------------------------------------------------
................................................................................AGAACCTGCAGGATAGA.........................................................................................................................................................171.000.00--------------------1.00------------------------------
..................................................................................................................................................................................TTTCCTTAACCGATTACCGCAG..................................................2211.001.00----------------------------------------------1.00----
........................................................................................................................................AATTCTGTCACTGCTCTGCACGCC..........................................................................................241.000.00--------------------------------1.00------------------
......................................................ATACTTAATTTTCTGCCA..................................................................................................................................................................................181.000.00-------------------------------1.00-------------------
.................................................................................................................................................................................GTTTCCTTAACCGATTACCGCAGA.................................................2411.001.00----------------1.00----------------------------------
.................................................................................................................................................................................................................GCGAGCTCTGTATCTCGAAG.....................2011.001.001.00--------------------------------------------------
..................................................................................................................................................................................................................................AAGCAATAATTCAGAACCACCGC.2311.001.00-1.00-------------------------------------------------
.............................................................................................................................................................................................................AAGAGCGAGCTCTGTATCTCG........................2111.001.00-------------------------1.00-------------------------
.............................................................................................................................................................................................................AAGAGCGAGCTCTGTATCTCGAAGC....................2511.001.00---------------------------1.00-----------------------
...............................................................................................................................................................................TTGTTTCCTTAACCGATTACCGCAGA.................................................261.000.00------------------1.00--------------------------------
..........................................................................................................................................................................................................ATGAAGAGCGAGCTCCAAT.............................191.000.00-----------------------------------1.00---------------
..........................................................................................................................................................................................................ATGAAGAGCGAGCTCTGTATCTC.........................2311.001.00-1.00-------------------------------------------------

Antisense strand
AGTCTAAGAGAAACTTAGGTCTCAAAACCAGAATTTGGGTATGAATTATGACTAATACTTAATTTTCTGCAAGATGGTAAAGAACCTGCAGGATACTTTTTTACACAGAAAAAATTGCACAACGGTATTAAAAGTGAATTCTGTCACTGCTCTGCATGCCACTTTGCACGTGCACTTGTTTCCTTAACCGATTACCGCAGCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCG
....................................................................((......((((((((((....))....))))))))...((((.((.(((((............(((((......)))))....((((........)))).))))).)).))))..............))....................................................
....................................................................69.................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR189785SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577744(Rovira)
total RNA. (breast)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
.........................................................................................................TTGTGCAATTTTTTCTG................................................................................................................................ 1741.501.50---0.75--------0.75--------------------------------------
..................................................................................................................TTGCACAACGGTATTCA....................................................................................................................... 171.000.00---1.00-----------------------------------------------
.........................................................................................................................................................................................................................................AATTCAGAACCACCGGAAG 191.000.00----------------------1.00----------------------------
............................................................................................................AAAAAATTGCACAACTCT............................................................................................................................ 181.000.00---1.00-----------------------------------------------
...........................................................................................................GAAAAAATTGCACAACTG............................................................................................................................. 181.000.00------------1.00--------------------------------------