ID: uc010fpn.2_intron_7_0_chr2_168097247_f.5p
GENE: (8)
chr2:168097197-168097446+


(1)
BRAIN
(1)
BREAST
(4)
CELL-LINE
(3)
HEART
(1)
LIVER
(1)
OTHER
(4)
SKIN
(1)
UTERUS

Sense strand
CGAGGAAGTAAACCAAGCATCTCAGTTTCATCAATATGTTCAAGAAACTGGTAAGAGTCTGGTATTATTGGTTCCAATACTCCTTTCTCCTATTGATGTGTTTGATTTTGAATGGATGACTTCCAAAGCACAGTCCTCCCCTCTGAGTAACTTTAGTAACTATGACTCATGGTTCCAGGGAGAGCTGAGTAGTATTTCTACAAATAATTAGATTTTGCCTGTGGTCATAGGTGCAATAAGTTTCTAAAAT
..............................................................................................((.(((............((((.....))))..((.(((..(((((..(((((....))))).(((((((...)))))))...)))))..))).))..))).))....................................................
........................................................................................89.............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
...........................................................................................................................................................GTAACTATGACTCATC...............................................................................1636.000.0036.00------------------
.............................................................................................TGATGTGTTTGATTTTTTAG.........................................................................................................................................2016.000.00-16.00-----------------
.............................................................................................TGATGTGTTTGATTTTATAG.........................................................................................................................................207.000.00-7.00-----------------
.............................................................................................TGATGTGTTTGATTTTTTA..........................................................................................................................................192.000.00-2.00-----------------
..........AACCAAGCATCTCAGTTTC.............................................................................................................................................................................................................................1911.001.00----1.00--------------
..........AACCAAGCATCTCAGTTTCATCAATATGTT..................................................................................................................................................................................................................3011.001.00----------1.00--------
.............................................................................................TGATGTGTTTGATTTTTTAA.........................................................................................................................................201.000.00-1.00-----------------
..........AACCAAGCATCTCAGTTTCATC..........................................................................................................................................................................................................................2211.001.00---1.00---------------
...............................................................................................................................................................................CAGGGAGAGCTGAGTTCGG........................................................191.000.00--------1.00----------
........................................................................................................................................................TTAGTAACTATGACTGAGG...............................................................................191.000.00--1.00----------------
.............................................................................................TGATGTGTTTGATTTATTA..........................................................................................................................................191.000.00-1.00-----------------
.........................................................................................................................................................TAGTAACTATGACTCTC................................................................................1750.600.40-----------0.20-0.20--0.20--
.........................................................................................................................................................TAGTAACTATGACTC..................................................................................1550.400.40-----------0.20------0.20
..........................................................................................................................................................AGTAACTATGACTCACT...............................................................................1750.200.20-----------------0.20-
.........................................................................................................................................................TAGTAACTATGACTCTCT...............................................................................1850.200.40------------0.20------
..........................................................................................................................................................AGTAACTATGACTCA.................................................................................1550.200.20--------------0.20----
.........................................................................................................................................................TAGTAACTATGACTCTCTT..............................................................................1950.200.40---------------0.20---

Antisense strand
CGAGGAAGTAAACCAAGCATCTCAGTTTCATCAATATGTTCAAGAAACTGGTAAGAGTCTGGTATTATTGGTTCCAATACTCCTTTCTCCTATTGATGTGTTTGATTTTGAATGGATGACTTCCAAAGCACAGTCCTCCCCTCTGAGTAACTTTAGTAACTATGACTCATGGTTCCAGGGAGAGCTGAGTAGTATTTCTACAAATAATTAGATTTTGCCTGTGGTCATAGGTGCAATAAGTTTCTAAAAT
..............................................................................................((.(((............((((.....))))..((.(((..(((((..(((((....))))).(((((((...)))))))...)))))..))).))..))).))....................................................
........................................................................................89.............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
..........................................................................................................................................................................................GAGTAGTATTTCTACATAAG............................................ 201.000.00-1.00-----------------
.............................................................................TACTCCTTTCTCCTAAGTA.......................................................................................................................................................... 191.000.00------1.00------------
...................................................................TTGGTTCCAATACTCCTA..................................................................................................................................................................... 181.000.00-----1.00-------------
...................................................................................................................ATGACTTCCAAAGCACAGGAG.................................................................................................................. 211.000.00---------1.00---------
...................................ATGTTCAAGAAACTGGGATA................................................................................................................................................................................................... 201.000.00--1.00----------------
.................................................................................................................................ACAGTCCTCCCCTCTGA........................................................................................................ 171.000.00-------1.00-----------
......................................................................................................................ACTGTGCTTTGGAAGT.................................................................................................................... 1680.120.12---0.12---------------