| (2) B-CELL | (12) CELL-LINE | (1) HEART | (1) LIVER | (1) OTHER | (1) RRP40.ip | (1) SKIN | (1) UTERUS |
| TAGTCTAGGGATACAGTGATGAGGAGTCTACCCTCGCCTCTGTCTCTCTCATGTGGTCTTATCCGTGTGTGAAAAGGTGCAGAAATCTTCGTTGCTGGTTTGTATTGTGGCCTATATTCGGAAAAGTGTACTTATTTTATTTTATTTTTTATATTTCCTGTCTCCCTATTTCTCTACCCCCTCTCCCCACCCTGATATAGGTCCTAAACCTATTTCTGGCCTTATTATTGAGCTCATTTAGTTCAGACAA .............................................................................................................................126...........................................................188............................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR444059(SRX128907) Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR038855(GSM458538) D10. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................CTTATTTTATTTTATTTTTCCAG................................................................................................. | 23 | 9.00 | 0.00 | 4.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTAG.................................................................................................... | 21 | 7.00 | 0.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TACTTATTTTATTTTATTTTTTATATTTCCTG.......................................................................................... | 32 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTATATTTCCTG.......................................................................................... | 31 | 1 | 5.00 | 5.00 | 1.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTAAAG................................................................................................ | 25 | 4.00 | 0.00 | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTCAG.................................................................................................... | 20 | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTATCTTG.............................................................................................. | 27 | 3.00 | 0.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TACTTATTTTATTTTATTTTAG.................................................................................................... | 22 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTCTTG................................................................................................... | 21 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TACTTATTTTATTTTATTG....................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTCTAG................................................................................................... | 21 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TTATTTTATTTTTTATATTGA............................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTCACC................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................TATTTTATTTTATTTTTTATATGTCG............................................................................................ | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTCG..................................................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................AGTGTACTTATTTTATTTTATTTTTTATATC............................................................................................... | 31 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTATTAT............................................................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TACTTATTTTATTTTATTTTTTATATTTCCCG.......................................................................................... | 32 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTCATC................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTTCAGT................................................................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTTCGG................................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTATG................................................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTCCAA................................................................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTCG.................................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................TTTATTTTATTTTTTATATTTTAAA.......................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTTCTT................................................................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................TGTACTTATTTTATTTTATTGTCC.................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| .................................................................................................................................ACTTATTTTATTTTATTTTTATG.................................................................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......AGGGATACAGTGATGAGGAGT............................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................CTTATTTTATTTTATTTCACG................................................................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................ACTTATTTTATTTTATTTTTTCAG................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TACTTATTTTATTTTATTTTTAAG.................................................................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................TTTTATATTTCCTGTCGCGT.................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................ATTTTATTTTATTTTTTATCG................................................................................................ | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTCCG.................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................TATTTCTCTACCCCCCCG.................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTTATAG................................................................................................ | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................CTTATTTTATTTTATTTTTACAG................................................................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TAGTCTAGGGATACAGTGATGAGGAGTCTACCCTCGCCTCTGTCTCTCTCATGTGGTCTTATCCGTGTGTGAAAAGGTGCAGAAATCTTCGTTGCTGGTTTGTATTGTGGCCTATATTCGGAAAAGTGTACTTATTTTATTTTATTTTTTATATTTCCTGTCTCCCTATTTCTCTACCCCCTCTCCCCACCCTGATATAGGTCCTAAACCTATTTCTGGCCTTATTATTGAGCTCATTTAGTTCAGACAA .............................................................................................................................126...........................................................188............................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR444059(SRX128907) Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR038855(GSM458538) D10. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................TTTCTCTACCCCCTCTAAA............................................................... | 19 | 5.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | |
| .........................................................................................................................................................................TTCTCTACCCCCTCTCAA............................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CCCCCTCTCCCCACCCTGGTAA.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .........................................................................................................................................................................TTCTCTACCCCCTCTCAAA.............................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ........................................................................................................................................................................TTTCTCTACCCCCTCTACA............................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ......................................................................................................................................................................TATTTCTCTACCCCCTCTC................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |