ID: uc010fmq.2_intron_1_0_chr2_131439172_f
GENE: (2)
chr2:131439122-131439669+


(1)
AGO2.ip
(2)
B-CELL
(2)
BRAIN
(4)
BREAST
(9)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(2)
HELA
(4)
LIVER
(1)
OTHER
(9)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ATCTTAATTCAGGAGGTAGAATGGAGCTTGAGATCAAGTGTCTGATCAAGGTACTTGAACTTGATCTGGAGGGCTCTGGGGAGCCATGGAAGATGCTGGATAAAGGAGTGACAGTCAGCTATGTTTTCGAGATGACTGTAGAAGCCTGCCTGGAAGGAGTGAACAAGAGCCAGGAGACCAGGGAGGGAGCTTGTGGGGCAGGTCTGGAGATGGTGAGGGAGGGATCCTGCTTGGATGAAAGGTCTTCAGGGACTGTCTCAGGTTACACACAGGTGTCCTCAGAGCTAGTGTGTTCAGAGTCTTGCCTCCAGGATGAAAATGGGAAGGAGTTGTCAGACGAGGACATATAAATGGAGGCTGGCATATTCATGAGTGCTGGTGGTGGTCCCGGTGTGGGACTACTGTGGGAACAGGGGTCTCTCCATCCAGGGATATGATGGATGGACCCTACATCACTCCATTCTGCCCTTCCTTTCCCTCCTCCCATTCTCCCGAAAGCCTCAGTGTATGGGCGCTGTTCATCCTCTGGTGCTGAAGCAGCCAAGAGA
...........................................................((..((((....(((((....))))).....))))...))....(((....(((((((.((.((....)))).))))))).....))).................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51...............................................................................................148..............................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................2537.007.007.00--------------------------------------------
.....................................................................................ATGGAAGATGCTGGAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................183.000.00--1.00--------1.00---1.00-----------------------------
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2622.502.502.50--------------------------------------------
.TCTTAATTCAGGAGGTAGAATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2642.502.502.50--------------------------------------------
...TTAATTCAGGAGGTAGAATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2442.252.252.25--------------------------------------------
.....................................................................................ATGGAAGATGCTGGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................172.000.00--1.00----------------1.00-------------------------
......................................................................................................................................................TGGAAGGAGTGAACAAGAGCCAGGAGT...................................................................................................................................................................................................................................................................................................................................................................................272.000.002.00--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2841.501.501.50--------------------------------------------
....TAATTCAGGAGGTAGAATGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2441.501.501.50--------------------------------------------
................................................AGGTACTTGAACTTGATCTGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2641.501.501.50--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2641.501.501.50--------------------------------------------
...TTAATTCAGGAGGTAGAATGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2541.251.251.25--------------------------------------------
..................................................................................................................................................................................................................TGGTGAGGGAGGGATCTA................................................................................................................................................................................................................................................................................................................................181.000.00-1.00-------------------------------------------
.....................................................................................ATGGAAGATGCTGGAGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------1.00-------------------------------------
......................................................................................................................................................TGGAAGGAGTGAACAAGAGCCAGGAGACCAAAA.............................................................................................................................................................................................................................................................................................................................................................................331.000.001.00--------------------------------------------
......................................................................................................................................................TGGAAGGAGTGAACAAGAGCCAGGAGACGC................................................................................................................................................................................................................................................................................................................................................................................301.000.001.00--------------------------------------------
....................................................................................................................................................................................................................................................................................................................CAGGATGAAAATGGGATA..............................................................................................................................................................................................................................181.000.00----------------1.00----------------------------
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAAGCCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................3021.001.001.00--------------------------------------------
.............................................................................................................................TTCGAGATGACTGTAGAAGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................221.000.001.00--------------------------------------------
.........................................................................................................................TGTTTTCGAGATGACTGTAGAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
................................................................................................................................GAGATGACTGTAGAAGCCTGCCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2621.001.001.00--------------------------------------------
......................................................................................................................................................TGGAAGGAGTGAACAAGAGCCAGGAGACCAT...............................................................................................................................................................................................................................................................................................................................................................................311.000.001.00--------------------------------------------
.....................................................................................ATGGAAGATGCTGGAACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----1.00---------------------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCACGGA............................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
....TAATTCAGGAGGTAGAATGGAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2541.001.001.00--------------------------------------------
....................................................................................................................................TGACTGTAGAAGCCTG................................................................................................................................................................................................................................................................................................................................................................................................................1631.001.00-----------------------0.33---0.330.33----------------
...............................................................................................................................CGAGATGACTGTAGAAGCCTGCCTGTT..........................................................................................................................................................................................................................................................................................................................................................................................................271.000.001.00--------------------------------------------
........................................................................................................................................................................................GGGAGCTTGTGGGGCAGT..........................................................................................................................................................................................................................................................................................................................................................181.000.00------1.00--------------------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCATGGA............................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCAGGGT............................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
..................................................................................................................................................................ACAAGAGCCAGGAGACCAGGGAGGGAGCC.....................................................................................................................................................................................................................................................................................................................................................................291.000.00-----------------1.00---------------------------
.....................................................................................ATGGAAGATGCTGGAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------1.00-------------------------------
................................................AGGTACTTGAACTTGATCTGGAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------
...........GGAGGTAGAATGGAGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------1.00----------------------------------
......................................................................................................................................................TGGAAGGAGTGAACA...............................................................................................................................................................................................................................................................................................................................................................................................1501.001.00------------1.00--------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................GGACTACTGTGGGAAACTG......................................................................................................................................191.000.00--------------1.00------------------------------
......................................................................................................................................................TGGAAGGAGTGAACAAGAGCCAGGT.....................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.001.00--------------------------------------------
.TCTTAATTCAGGAGGTAGAATCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
.........................................................................................................................................................AAGGAGTGAACAAGAGCCAGGAGACA.................................................................................................................................................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------
..............................................................................................................................TCGAGATGACTGTAGAAGCCTGCCGG............................................................................................................................................................................................................................................................................................................................................................................................................261.000.001.00--------------------------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCAGTGA............................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
.........................................................................................................................TGTTTTCGAGATGACTGTAGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------
.......................................................................................................................................................................................AGGGAGCTTGTGGGGCATGC.........................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------1.00-----------------------
...........................................................................................................................................AGAAGCCTGCCTGGAAAGA......................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------1.00------------------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCAGGGAGGGAA.......................................................................................................................................................................................................................................................................................................................................................................301.000.001.00--------------------------------------------
....................................................................................CATGGAAGATGCTGGACAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------1.00--------------------------
...............................................................................................................................................................TGAACAAGAGCCAGGAGACCAGGGAGTAT........................................................................................................................................................................................................................................................................................................................................................................291.000.001.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................GGTCCCGGTGTGGGAACAC..................................................................................................................................................191.000.00---1.00-----------------------------------------
.........CAGGAGGTAGAATGGAGCTTGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.750.750.75--------------------------------------------
.................................TCAAGTGTCTGATCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.750.75------------------------0.75--------------------
....TAATTCAGGAGGTAGAATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.750.750.75--------------------------------------------
......................................................................................................................................................................................................................................TTGGATGAAAGGTCTTCAGGGACTGTC...................................................................................................................................................................................................................................................................................................2770.570.570.57--------------------------------------------
..........................................................................................................................GTTTTCGAGATGACTGTAGAAGCCTG................................................................................................................................................................................................................................................................................................................................................................................................................2620.500.50-----------------------0.50---------------------
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAAGCCTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................3120.500.500.50--------------------------------------------
....TAATTCAGGAGGTAGAATGGAGCTTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.500.500.50--------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................GTCAGACGAGGACATATAAATGGAGGC..............................................................................................................................................................................................2740.500.500.50--------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TGTCAGACGAGGACATATAAATGGAGGC..............................................................................................................................................................................................2840.500.500.50--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTGAGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3140.500.500.50--------------------------------------------
................................................................................................................................GAGATGACTGTAGAAGCCTGCCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2520.500.500.50--------------------------------------------
.............................................................................................................................TTCGAGATGACTGTAGAAGCCTGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................2620.500.500.50--------------------------------------------
.....................................................................................................................................GACTGTAGAAGCCTG................................................................................................................................................................................................................................................................................................................................................................................................................1570.430.43------------------------------0.29----------0.14---
.......................................................................................................................................................................................................................................TGGATGAAAGGTCTTCAGGGACTGTC...................................................................................................................................................................................................................................................................................................2670.430.430.43--------------------------------------------
..................................................................................................................................GATGACTGTAGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1630.330.33--------------------------0.33------------------
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2430.330.330.33--------------------------------------------
......................................................................................................................CTATGTTTTCGAGATGACTGTAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................2630.330.330.33--------------------------------------------
.......................................................................................................................TATGTTTTCGAGATGACTGTAGAACCC..................................................................................................................................................................................................................................................................................................................................................................................................................2730.330.330.33--------------------------------------------
...........................................................................................................................TTTTCGAGATGACTGTAGA......................................................................................................................................................................................................................................................................................................................................................................................................................1930.330.330.33--------------------------------------------
.........................................................................................................................TGTTTTCGAGATGACTGTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2030.330.330.33--------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGACTACTGTGGGAACAGGGG....................................................................................................................................2540.250.250.25--------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATGGATGGACCC....................................................................................................1640.250.250.25--------------------------------------------
................................................AGGTACTTGAACTTGATCTGGAGGGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.250.250.25--------------------------------------------
..................................CAAGTGTCTGATCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.250.25----------------------------------0.25----------
................................................................................................................................................................................................................................................................................................................................................ACGAGGACATATAAATGGAGGC..............................................................................................................................................................................................2240.250.250.25--------------------------------------------
........TCAGGAGGTAGAATGGAGCTTGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.250.250.25--------------------------------------------
...TTAATTCAGGAGGTAGAATGGAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.250.250.25--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................AGGACATATAAATGGAGGCTGGCATA.......................................................................................................................................................................................2640.250.250.25--------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GAGGACATATAAATGGAGGCTGGCATA.......................................................................................................................................................................................2740.250.250.25--------------------------------------------
....TAATTCAGGAGGTAGAATGGAGCTTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.250.250.25--------------------------------------------
............................................................................................................................................................................................................................................................................................................................................TCAGACGAGGACATATAAATGGAGGC..............................................................................................................................................................................................2640.250.250.25--------------------------------------------
.TCTTAATTCAGGAGGTAGAATGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.250.25--------------------------------0.25------------
...............GTAGAATGGAGCTTGAGATCAAGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.250.250.25--------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................TATAAATGGAGGCTGGCATATTCATG.................................................................................................................................................................................2640.250.250.25--------------------------------------------
......................................................................................................................................................................................................................................................CAGGGACTGTCTCAGGTTACACACAG....................................................................................................................................................................................................................................................................................2640.250.250.25--------------------------------------------
.........CAGGAGGTAGAATGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.250.25-------------------------0.25-------------------
...................................................................................................................................................................................................................................................................................................................................................AGGACATATAAATGGAGGCTGGCATATT.....................................................................................................................................................................................2840.250.250.25--------------------------------------------
...............GTAGAATGGAGCTTGAGATCAAGTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.250.250.25--------------------------------------------
...............................................AAGGTACTTGAACTTGATCTGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.250.250.25--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTGAGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.250.250.25--------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................TATTCATGAGTGCTGGTGGTGGTCCC...............................................................................................................................................................2640.250.250.25--------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGGGCGCTGTTCATCCTCTGG...................2540.250.250.25--------------------------------------------
........TCAGGAGGTAGAATGGAGCTTGAGATCAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3240.250.250.25--------------------------------------------
....TAATTCAGGAGGTAGAATGGAGCTTGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3140.250.250.25--------------------------------------------
.............AGGTAGAATGGAGCTTGAGATCAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.250.250.25--------------------------------------------
....................ATGGAGCTTGAGATCAAGTGTCTGATCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3140.250.250.25--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................TGGGAAGGAGTTGTCAGACGAGGAC............................................................................................................................................................................................................2540.250.250.25--------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................CAGACGAGGACATATAAATGGAGGCT.............................................................................................................................................................................................2640.250.250.25--------------------------------------------
.......TTCAGGAGGTAGAATGGAGCTTGAGATCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3040.250.250.25--------------------------------------------
.............................................................................................TGCTGGATAAAGGAGTGACAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.250.250.25--------------------------------------------
.............AGGTAGAATGGAGCTTGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.250.25-------------------------------0.25-------------
.......TTCAGGAGGTAGAATGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.250.250.25--------------------------------------------
...............................................................................................CTGGATAAAGGAGTGACAGTCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2440.250.250.25--------------------------------------------
............................................................................................................................................................................................................................................................................................................................................TCAGACGAGGACATATAAATGGAGGCT.............................................................................................................................................................................................2740.250.250.25--------------------------------------------
.......................................................................................................................................................................................................................................................................TACACACAGGTGTCCTCAGAGC.......................................................................................................................................................................................................................................................................2240.250.250.25--------------------------------------------
......ATTCAGGAGGTAGAATGGAGCTTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.250.250.25--------------------------------------------
.TCTTAATTCAGGAGGTAGAATGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.250.250.25--------------------------------------------
...........................................................................................................................................................................................................................................................................................................................AAAATGGGAAGGAGTTGTCAGACGAGGACATA.........................................................................................................................................................................................................3240.250.25---------------------------------0.25-----------
.........................................................................................................................................................................................................................................................................................................................TGAAAATGGGAAGGAGTTGTCAGAC..................................................................................................................................................................................................................2540.250.250.25--------------------------------------------
...TTAATTCAGGAGGTAGAATGGAGCTTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.250.250.25--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GACGAGGACATATAAATGGAGGCTGG...........................................................................................................................................................................................2640.250.250.25--------------------------------------------
........TCAGGAGGTAGAATGGAGCTTGAGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.250.250.25--------------------------------------------
..CTTAATTCAGGAGGTAGAATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.250.250.25--------------------------------------------
....TAATTCAGGAGGTAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1790.220.220.22--------------------------------------------
.........CAGGAGGTAGAATGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1750.200.20--0.20------------------------------------------
........TCAGGAGGTAGAATGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.200.20-------------------------0.20-------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................TACTGTGGGAACAGGGGTCTCTCC.............................................................................................................................2460.170.170.17--------------------------------------------
.................................................................................................................................................................AACAAGAGCCAGGAGACCAGGGAGGGAGC......................................................................................................................................................................................................................................................................................................................................................................2960.170.170.17--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................TACTGTGGGAACAGGGGTCTCTCCATC..........................................................................................................................2760.170.170.17--------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGGTCTCTCCATCCAGGG.....................................................................................................................2260.170.17-------------------------------------0.17-------
.............................................................TGATCTGGAGGGCTCTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.140.140.14--------------------------------------------
.............................................................................................................................................................................................................................................................................CAGGTGTCCTCAGAGC.......................................................................................................................................................................................................................................................................1670.140.140.14--------------------------------------------
....................................................................................................................................................................................................................................GCTTGGATGAAAGGTCTTCAGGGACTGT....................................................................................................................................................................................................................................................................................................2870.140.140.14--------------------------------------------
...........................................................................................................................................................................................................................................TGAAAGGTCTTCAGGGACTGTCTCAGG..............................................................................................................................................................................................................................................................................................2770.140.140.14--------------------------------------------
......................................................TTGAACTTGATCTGGAGGGCTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.140.140.14--------------------------------------------
....................................................................................................................................................................................................................................GCTTGGATGAAAGGTCTTCAGGGACTGTC...................................................................................................................................................................................................................................................................................................2970.140.140.14--------------------------------------------
......................................................................................................................................................................................................................................TTGGATGAAAGGTCTTCAGGGACTGT....................................................................................................................................................................................................................................................................................................2670.140.140.14--------------------------------------------
.............................................................TGATCTGGAGGGCTCTGGGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.140.14----------------------------------------0.14----
.......................................................TGAACTTGATCTGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.140.140.14--------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCCTCCTCCCATTCTCC........................................................2180.120.12-------------------------------------------0.12-
...TTAATTCAGGAGGTAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.110.110.11--------------------------------------------

Antisense strand
ATCTTAATTCAGGAGGTAGAATGGAGCTTGAGATCAAGTGTCTGATCAAGGTACTTGAACTTGATCTGGAGGGCTCTGGGGAGCCATGGAAGATGCTGGATAAAGGAGTGACAGTCAGCTATGTTTTCGAGATGACTGTAGAAGCCTGCCTGGAAGGAGTGAACAAGAGCCAGGAGACCAGGGAGGGAGCTTGTGGGGCAGGTCTGGAGATGGTGAGGGAGGGATCCTGCTTGGATGAAAGGTCTTCAGGGACTGTCTCAGGTTACACACAGGTGTCCTCAGAGCTAGTGTGTTCAGAGTCTTGCCTCCAGGATGAAAATGGGAAGGAGTTGTCAGACGAGGACATATAAATGGAGGCTGGCATATTCATGAGTGCTGGTGGTGGTCCCGGTGTGGGACTACTGTGGGAACAGGGGTCTCTCCATCCAGGGATATGATGGATGGACCCTACATCACTCCATTCTGCCCTTCCTTTCCCTCCTCCCATTCTCCCGAAAGCCTCAGTGTATGGGCGCTGTTCATCCTCTGGTGCTGAAGCAGCCAAGAGA
...........................................................((..((((....(((((....))))).....))))...))....(((....(((((((.((.((....)))).))))))).....))).................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51...............................................................................................148..............................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTTCCTTTCCCTCCGAAA............................................................... 211.000.00-1.00-------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTACATCACTCCAGTAT.................................................................................... 211.000.00--------------------1.00------------------------
......ATTCAGGAGGTAGAAGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTCCTTTCCCTCCTCAGA.............................................................. 211.000.00-1.00-------------------------------------------
.....................................................................................................................................GACTGTAGAAGCCTGCGTC............................................................................................................................................................................................................................................................................................................................................................................................................ 1971.000.00---1.00-----------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCTGCCCTTCCTGACT....................................................................... 201.000.00---------1.00-----------------------------------
.........................................................................................................................................................................CCAGGAGACCAGGGAGTGT........................................................................................................................................................................................................................................................................................................................................................................ 191.000.00----------------------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTCCTTTCCCTCCTAGAA.............................................................. 211.000.00----1.00----------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGAACAGCGCCCATACACTGAG....................... 2640.250.250.25--------------------------------------------
...............................................................................................................................................................................................................................................................................AACACACTAGCTCTGAGGACACC.............................................................................................................................................................................................................................................................. 2350.200.20------------------------------------0.20--------
..................................................................................................................................................................................................................................................................................................AGGCAAGACTCTGAACA................................................................................................................................................................................................................................................. 1750.200.20-----------------------------------0.20---------
.................................................................................................................................................................................................................................................................................TGAACACACTAGCTCTGAGGACA............................................................................................................................................................................................................................................................ 2350.200.200.20--------------------------------------------
...........................................................................................................................................................................................................................................................................................TCTGAACACACTAGC.......................................................................................................................................................................................................................................................... 1560.170.17--------------------------------------0.17------
..............................................................................................................................................................................CCTGCCCCACAAGCTCCCTCCCTGGTCT.......................................................................................................................................................................................................................................................................................................................................................... 2860.170.17---------------------------------------0.17-----
.......................................................................................................................................................................................................................................................................................................................ACTCCTTCCCATTTTCATC.......................................................................................................................................................................................................................... 1970.140.14-----------------------------0.14---------------
.......................................................................................................................................................................................................................................................................................................................ACAACTCCTTCCCATTTTCATC....................................................................................................................................................................................................................... 2270.140.14-----------------------------0.14---------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGGAAAGGAAGGGCA.................................................................. 1980.120.12--------------------------------------------0.12
...........................................................................................................................................................................................................................................................................................................................................................................................ACACCGGGACCACCA.......................................................................................................................................................... 1580.120.12------------------------------------------0.12--