ID: uc010fik.2_intron_4_0_chr2_99149920_f.3p
GENE: (5)
chr2:99181980-99182229+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(2)
AGO3.ip 		(15)
B-CELL 		(14)
BRAIN 		(10)
BREAST 		(44)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(3)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(14)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
CCACCAGAGCCACACCTGCACCCCTCCTGTCACAGCCAGGCCTGGGCTTGGCTGCCTTCTGCTGAGACTGGGGAGAGTAGCAGGGCCCTCTGCCTGACAGCCCTGCCCCTCTCTCATGTCCAGGGGAGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGGAAATCG
.............................................................(((.(((..(((((((..(((((((..((.....))..)))))))..)))))))..))))))...............................................................................................................................
.........................................................58...............................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
..............................................................TGAGACTGGGGAGAGTAGCAGG......................................................................................................................................................................22125.0025.002.002.00--1.00-8.00-2.00-2.00------1.001.00------1.00--------1.00------------1.00---------1.00--1.00--------------------------------1.00-----------------------------
................................................................AGACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................22119.0019.005.00-1.00-3.00------2.002.001.00---------1.00-----------------1.00-1.00-----------------1.00--1.00----------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCA........................................................................................................................................................................22112.0012.00--1.00--2.00-1.00--2.001.00-1.00-------2.00--------------------1.00------------------------------------------------------------1.00-------------------
................................................................AGACTGGGGAGAGTAGCAGGG.....................................................................................................................................................................21111.0011.004.00---1.00--------------------------1.00-------1.00--------2.00---------------------------------------------1.00---------------1.00------------
............................................................GCTGAGACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................26110.0010.00-8.00--------------------1.001.00---------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAG.......................................................................................................................................................................23110.0010.003.00-1.00----2.00--------------------------------------1.00---------------------------------------------1.00------1.00----1.00------------------
...............................................................GAGACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................2319.009.004.002.00-----------1.00---------------1.00-1.00-------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGC.........................................................................................................................................................................2119.009.00--------1.00------1.00-1.00-1.00----------1.00----1.00--------1.00----------------------------------1.00--------------------------------1.00----------
...............................................................GAGACTGGGGAGAGTAGCAGG......................................................................................................................................................................2119.009.00--3.00-----------------1.00--------------------------------1.00----1.00--------1.00---1.00------------------------------1.00--------------------
..............................................................TGAGACTGGGGAGAGTAGCAG.......................................................................................................................................................................2118.008.002.00-------------1.00-----1.00--------------------------1.00--------------------------------1.00--------------1.001.00--------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGG.....................................................................................................................................................................2318.008.003.001.00---1.00-------------1.00------1.00-----------------------------------------------------------1.00------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCAT..................................................................................................................................................................2416.0019.002.00-----------------1.00------------------------------1.00-----------------------------------------1.00---------------1.00---------------
..............................................................TGAGACTGGGGAGAGTAGCA........................................................................................................................................................................2016.006.00--------------------------------------1.00--1.00---------------------------------1.00--------1.00------------------------1.00----1.00--------
............................................................GCTGAGACTGGGGAGAGTAG..........................................................................................................................................................................2015.005.00--------------2.00-------------------------1.00---------------1.00-------------------------------------------------1.00----------------
.............................................................CTGAGACTGGGGAGAGTAGCAGG......................................................................................................................................................................2315.005.00--1.00--2.00---1.00---------------1.00-------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGA......................................................................................................................................................................2215.008.004.00-------1.00------------------------------------------------------------------------------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................2014.004.004.00--------------------------------------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGG.....................................................................................................................................................................2214.004.00-2.001.00------------1.00-----------------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAGGGCT...................................................................................................................................................................2714.0010.00---------------------------3.00------------------------------------------------------------------------1.00----------------------
...............................................................GAGACTGGGGAGAGTAGCAGGAA....................................................................................................................................................................2314.009.00----3.00---------------------------------------------------1.00------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGGAT...................................................................................................................................................................2414.004.00-4.00-------------------------------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAGGGTT...................................................................................................................................................................273.000.00------------3.00--------------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGGT....................................................................................................................................................................2413.008.00--------------1.00-------1.00---------1.00------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGGGCTT..................................................................................................................................................................2713.002.003.00--------------------------------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGTAA....................................................................................................................................................................2513.003.003.00--------------------------------------------------------------------------------------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCCT..................................................................................................................................................................2213.001.003.00--------------------------------------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAG.......................................................................................................................................................................2013.003.00-----2.00--------------------------------------------------------------------1.00------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAG.......................................................................................................................................................................2213.003.00--1.00---------------1.00----1.00---------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAT.......................................................................................................................................................................2313.0012.00------------------------1.00-----------1.00-1.00------------------------------------------------------------------------------------
.................................................................GACTGGGGAGAGTAGCAGGGCAA..................................................................................................................................................................2313.001.00------------------------------2.00---1.00----------------------------------------------------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCCAAAA...............................................................................................................................................................2513.001.003.00--------------------------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAG.......................................................................................................................................................................1922.502.500.50--------0.50----0.50-------------------------------------------0.50-----------------------------------------------------------0.50----
...............................................................GAGACTGGGGAGAGTAGCAGA......................................................................................................................................................................2112.003.00-------------------------------------2.00-------------------------------------------------------------------------------------
....................................................................TGGGGAGAGTAGCAGGGCAT..................................................................................................................................................................202.000.00--------2.00------------------------------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGGCTT..................................................................................................................................................................2512.009.00-----1.00--------------------------------------------1.00------------------------------------------------------------------------
...................................................................CTGGGGAGAGTAGCAGGGC....................................................................................................................................................................1922.002.002.00--------------------------------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGC.........................................................................................................................................................................2012.002.00-----------------------------------1.00---1.00-----------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCA........................................................................................................................................................................2112.002.00-----1.00-----------1.00---------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCT...................................................................................................................................................................2312.0019.00--1.00------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................2512.002.00--------1.00---------------------------------------------1.00--------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAA.......................................................................................................................................................................2312.0012.00--------------------------------------------1.00-------------------------------1.00----------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGA....................................................................................................................................................................2212.0011.00---------1.00---------1.00-------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGC.........................................................................................................................................................................1912.002.00------------------------------------------------------1.00----------1.00---------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCA...................................................................................................................................................................2312.0019.00------------------------------------------------------------------------1.00---------1.00----------------------------------------
................................................................AGACTGGGGAGAGTAGAAT.......................................................................................................................................................................192.000.00----2.00----------------------------------------------------------------------------------------------------------------------
....................................................................TGGGGAGAGTAGCAGGGCC...................................................................................................................................................................1912.002.00--1.00--------------------------1.00---------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAA.......................................................................................................................................................................2212.002.00-------1.00------------------------------------------------------------------------------------------1.00------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................2412.002.00-------------1.00---------------------------------------------------------------------------1.00---------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGATG....................................................................................................................................................................2412.008.00--------------------------2.00------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGGGAT...................................................................................................................................................................261.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAT.......................................................................................................................................................................2211.002.00---------------------------------------------1.00-----------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAGGT.....................................................................................................................................................................2511.001.00---------------------1.00-----------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCA........................................................................................................................................................................1821.001.00-------0.50-------------------------------------------------------------------------------------------------------------0.50-----
.................................................................................AGGGCCCTCTGCCTGTCGC......................................................................................................................................................191.000.00----------------1.00----------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCAA..................................................................................................................................................................2411.0019.00----------------------------------------------1.00----------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGAA...................................................................................................................................................................2311.0011.00------------------1.00--------------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGGGCC...................................................................................................................................................................2611.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGGCTA..................................................................................................................................................................2511.009.00------------------------1.00--------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGTAT...................................................................................................................................................................2321.001.00-------------------------------------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCGTCATCACAGGAAATCGCG221.000.00-----------------------------------------------------------------------------------1.00---------------------------------------
....................................................................TGGGGAGAGTAGCAGGGCTTT.................................................................................................................................................................211.000.00----------------------------1.00----------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCATGGC....................................................................................................................................................................2221.001.00----1.00----------------------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCCAAA................................................................................................................................................................261.000.00-------------------------------------------1.00-------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGAT....................................................................................................................................................................2221.001.00------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTAGCAGA......................................................................................................................................................................2311.003.00------------------------------------------------------------------------------------------1.00--------------------------------
.............................................................CTGAGACTGGGGAGAGTAGA.........................................................................................................................................................................201.000.00---------------------------------------------------------------1.00-----------------------------------------------------------
.................................................................................................CAGCCCTGCCCCTCTCTCATGT...................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGAAAA..................................................................................................................................................................2511.009.00-----------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ATGCTGGAGGACATGAGCCTGGG..........................................................................................231.000.00----------------1.00----------------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAA..........................................................................................................................................................................201.000.00---------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................CTGAGACTGGGGAGAGTA...........................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................GAGGAGCTGGCAATGCTGGA.........................................................................................................2011.001.00----------------------------1.00----------------------------------------------------------------------------------------------
...............................................................GAGACTGGGGAGAGTAGCAGGGCATT.................................................................................................................................................................2611.009.00--------------------1.00------------------------------------------------------------------------------------------------------
.................................................................GACTGGGGAGAGTAGCAGGGC....................................................................................................................................................................2111.001.00-------1.00-------------------------------------------------------------------------------------------------------------------
...................................................................CTGGGGAGAGTAGCAGGGCTTT.................................................................................................................................................................2221.002.00---------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................GACTGGGGAGAGTAGCAGGGCATT.................................................................................................................................................................2411.001.00---------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAA.......................................................................................................................................................................2111.006.00---------------------------------------------------------------------------------------------------------------1.00-----------
................................................................AGACTGGGGAGAGTAGCAGGGCG...................................................................................................................................................................2311.0019.00--1.00------------------------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGGG....................................................................................................................................................................2411.008.00----------------------------1.00----------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCATT.................................................................................................................................................................2511.0019.00-------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................GACTGGGGAGAGTAGCAGGGT....................................................................................................................................................................2111.001.00-------------------------------1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGACTTGAGGAACGTGAC..................................................................1911.001.00----------------------------------------------------------------------1.00----------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGATT...................................................................................................................................................................2321.001.00-------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................TGGGGAGAGTAGCAGGGCCCTAT...............................................................................................................................................................231.000.00---1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGGA....................................................................................................................................................................2411.008.00-----------------------------------------------------------------------------1.00---------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCAT..................................................................................................................................................................2211.004.00----------1.00----------------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCAAAA................................................................................................................................................................2611.0019.00---------------------------------------------1.00-----------------------------------------------------------------------------
..........................................................................................................................................TGCTGGAGGACATGAGCCTTGGGACCA.....................................................................................271.000.00----------------1.00----------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGGCAA..................................................................................................................................................................2611.002.00---------------------------------------------------------------------------------------1.00-----------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAGGT.....................................................................................................................................................................2311.0025.00-------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................CAATGCTGGAGGACATGA.................................................................................................1811.001.00---------------------------------------------------------------------------------1.00-----------------------------------------
....................................................................TGGGGAGAGTAGCAGGGAA...................................................................................................................................................................191.000.00--------------------------------------------------1.00------------------------------------------------------------------------
.................................................................................................CAGCCCTGCCCCTCTCTCATGTCC.................................................................................................................................2411.001.00---------------------------------------------------------------------------------------------------------1.00-----------------
............................................................................................................................................................TTGGGATCATGGACTTGAGGAACGC.....................................................................2511.001.00----------------------1.00----------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGTAT.......................................................................................................................................................................2311.005.00------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................AGCCTTGGGATCATGGA.................................................................................1711.001.00---------------------------------------------------------------------1.00-----------------------------------------------------
...................................................................................................................ATGTCCAGGGGAGGAGGGCT...................................................................................................................201.000.00----------------1.00----------------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAGG......................................................................................................................................................................2411.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
...................................................................CTGGGGAGAGTAGCAGGGCCCTT................................................................................................................................................................231.000.00-------1.00-------------------------------------------------------------------------------------------------------------------
..............................................................TGAGACTGGGGAGAGTAGCAAAG.....................................................................................................................................................................2311.006.00--------------------------------------------------------------------1.00------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCTT..................................................................................................................................................................2411.0019.00-------------------------------------------------------------------------------------------------1.00-------------------------
.................................................................................................CAGCCCTGCCCCTCTCTCAATT...................................................................................................................................221.000.00-----------------------------------------------------------------------------------------------------1.00---------------------
.............................................................CTGAGACTGGGGAGAGTAGCAAA......................................................................................................................................................................2311.002.00-----------------1.00---------------------------------------------------------------------------------------------------------
...................................................................CTGGGGAGAGTAGCAGGGCC...................................................................................................................................................................2011.001.001.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................ATGGACTTGAGGAACGTGACCTT...............................................................2311.001.00------------------------------------------------------------------------------1.00--------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGAAA...................................................................................................................................................................2321.001.00---------------------------------1.00-----------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGA......................................................................................................................................................................2021.002.50-----------------------------------------------------1.00---------------------------------------------------------------------
....................................................................TGGGGAGAGTAGCAGGGCCAA.................................................................................................................................................................2111.002.00-------------------------------------------------------------------------------------------------------------------1.00-------
............................................................GCTGAGACTGGGGAGAGTAGAAT.......................................................................................................................................................................2311.005.00----------------------------------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................TTGGGATCATGGACTTGAGGAACG......................................................................2411.001.00---------1.00-----------------------------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGCAGGGT....................................................................................................................................................................261.000.00-1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCC...................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00---------------------------------------------------------------
................................................................................................................................................................................................................................ATGCTGCCCGTCATCACAGGAAATC.2511.001.00----------------------------------------------------------------------------------------1.00----------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCCTAGT...............................................................................................................................................................2511.001.00-------------------------------------------------1.00-------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGG......................................................................................................................................................................2021.001.00-------------------0.50---------------------------------------------------------------------------------------------------0.50---
..............................................................TGAGACTGGGGAGAGTAGCAT.......................................................................................................................................................................2111.006.00---------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCCTTGGGATCATGGACTT..............................................................................1911.001.00--1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGCTGGAGGACATGAGCCTTGGGATCAT....................................................................................2811.001.00---------1.00-----------------------------------------------------------------------------------------------------------------
................................................................AGACTGGGGAGAGTAGCAGGGCCC..................................................................................................................................................................2411.001.00----------------------------------------------------1.00----------------------------------------------------------------------
.................................................................GACTGGGGAGAGTAGCAGGG.....................................................................................................................................................................2011.001.00-----------1.00---------------------------------------------------------------------------------------------------------------
..................................................................ACTGGGGAGAGTAGCAGGGCCAA.................................................................................................................................................................2311.001.00-----------------------------1.00---------------------------------------------------------------------------------------------
............................................................GCTGAGACTGGGGAGAGTAGA.........................................................................................................................................................................2111.005.00--------------------------------1.00------------------------------------------------------------------------------------------
.................................................................................................CAGCCCTGCCCCTCTCTCCTGT...................................................................................................................................221.000.00------------------------------------------------------------------1.00--------------------------------------------------------
.........................................................................................................CCCCTCTCTCATGTCC.................................................................................................................................1640.500.50------------------------------------------------------------------------------------------------------------------------0.250.25-
..............................................................TGAGACTGGGGAGAGTA...........................................................................................................................................................................1720.500.50--------------------------------------------------------------------------------------------------------------------0.50------

Antisense strand
CCACCAGAGCCACACCTGCACCCCTCCTGTCACAGCCAGGCCTGGGCTTGGCTGCCTTCTGCTGAGACTGGGGAGAGTAGCAGGGCCCTCTGCCTGACAGCCCTGCCCCTCTCTCATGTCCAGGGGAGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGGAAATCG
.............................................................(((.(((..(((((((..(((((((..((.....))..)))))))..)))))))..))))))...............................................................................................................................
.........................................................58...............................................................123.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
.................................................................................AGGGCCCTCTGCCTGACCCG..................................................................................................................................................... 209.000.00---8.00----------------------------------------------------------1.00------------------------------------------------------------
.................................................................................AGGGCCCTCTGCCTGAACCG..................................................................................................................................................... 201.000.00---1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................CAGCCCTGCCCCTCTCTGGA..................................................................................................................................... 201.000.00------------------------------------------1.00--------------------------------------------------------------------------------
....................GCCTGGCTGTGACAGGAGGGG................................................................................................................................................................................................................. 2111.001.00----------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................AGGGCCCTCTGCCTGACCAG..................................................................................................................................................... 201.000.00---1.00-----------------------------------------------------------------------------------------------------------------------
................................................................................CAGGGCCCTCTGCCTGATT....................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................................................................................GCCACTTCCAGCGCCTCCAG.............................. 201.000.00-------------------------------------------------------------------------1.00-------------------------------------------------
.....................................................ACTCTCCCCAGTCTCAGCAGAAGGC............................................................................................................................................................................ 2511.001.00------------------------------------------------------------------------------------------------------------1.00--------------
...TGCAGGTGTGGCTCTGG...................................................................................................................................................................................................................................... 1730.330.33---------0.33-----------------------------------------------------------------------------------------------------------------
..........GGAGGGGTGCAGGTGTG............................................................................................................................................................................................................................... 1760.170.17--------------------------------------------------------------------------------------------------------------------------0.17