ID: uc010ffs.2_intron_6_0_chr2_75915104_r.3p
GENE: (6)
chr2:75915054-75915303-


(1)
AGO2.ip 		(2)
B-CELL 		(14)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(6)
LIVER 		(1)
OTHER 		(10)
SKIN 		(2)
UTERUS

Sense strand
TCTTATGTTACTTAGACACCATGTCTCAGTCATGCTGTCCTGCAATCCTGCCTAGCCTTGGTGGTCTAGTGTTAAAATAGGGAATTAATCTCTTCTGATCCTTAGAAAAGCTCTGGTGATTATTGAAAAAAATAATAACTATTTAAAAATACACTAATGTTGAAAGATTTCTTTATAACTTTTGTAATTTTCTTTGTAAGTTGGAATCCACAGGTTTAAAAGAGATGCCATGGTTCAAATCTGTAGAAGA
....................................................((((.((((((..((((.(((....(((((.((((........)))))))))....))).))))..((((((......))))))...............)))))).))))(((((.....(((((.....)))))...))))).......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577742(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577579(Rovira)
total RNA. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR189783SRR189782SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
......................................................GCCTTGGTGGTCTAGTGG..................................................................................................................................................................................18115.001.003.001.00-2.003.001.00----3.00-------------1.00-------------1.00-------------
......................................................GCCTTGGTGGTCTAGTGGT.................................................................................................................................................................................19112.001.003.002.00-3.00--1.00-----2.00--------------------------1.00------------
......................................................GCCTTGGTGGTCTAGTGGTT................................................................................................................................................................................2019.001.007.00--1.00------------1.00-----------------------------------
..........................................................TGGTGGTCTAGTGTTAGGAT............................................................................................................................................................................209.000.00-----------3.00---2.00-1.00-------1.001.00-------1.00-----------------
......................................................GCCTTGGTGGTCTAGTGGTTA...............................................................................................................................................................................2118.001.00--4.00-1.00----1.00--1.00-1.00-------------------------------------
..........................................................TGGTGGTCTAGTGTTAGGA.............................................................................................................................................................................198.000.00--------2.00---------2.002.00--------1.00---------------1.00-------
...........................................................GGTGGTCTAGTGTTAGGA.............................................................................................................................................................................187.000.00--2.00--1.00-1.002.00---------------------------------1.00---------
..........................................................TGGTGGTCTAGTGTTAGG..............................................................................................................................................................................186.000.00---------1.00---1.00-------------1.00--1.00--1.00-1.00----------------
...........................................................GGTGGTCTAGTGTTAGG..............................................................................................................................................................................175.000.00-------3.00------1.00--------1.00----------------------------
...........................................................GGTGGTCTAGTGTTAGGAT............................................................................................................................................................................194.000.00-----1.00-------1.00--------1.00--------1.00--------------------
..........................................................TGGTGGTCTAGTGTTAG...............................................................................................................................................................................173.000.00-----------------1.00--1.00----------------------1.00--------
......................................................GCCTTGGTGGTCTAGTGGTA................................................................................................................................................................................2013.001.002.00--1.00------------------------------------------------
..........................................................TGGTGGTCTAGTGTTTAGG.............................................................................................................................................................................192.000.00-----1.00------------------------------1.00---------------
......................................................GCCTTGGTGGTCTAGTGT..................................................................................................................................................................................1812.002.00----1.00-1.00---------------------------------------------
......................................................GCCTTGGTGGTCTAGTGGTTG...............................................................................................................................................................................2112.001.002.00---------------------------------------------------
......................................................GCCTTGGTGGTCTAGTTGT.................................................................................................................................................................................192.000.001.00--------------------------------------------1.00------
......................................................GCCTTGGTGGTCTAGCGG..................................................................................................................................................................................1841.250.500.50---0.25-0.25--------------0.25------------------------------
......................................................GCCTTGGTGGTCTAGTTT..................................................................................................................................................................................181.000.001.00---------------------------------------------------
..........................................................TGGTGGTCTAGTGTTTTCG.............................................................................................................................................................................191.000.00---------------------1.00------------------------------
...............................................................................................................................................................................TAACTTTTGTAATTTTCTTTGTAAG..................................................2511.001.00--------------------------------1.00-------------------
.......................................................CCTTGGTGGTCTAGTGTT.................................................................................................................................................................................1811.001.00----------------------------------------1.00-----------
.............................................................................................................................AAAAAAATAATAACTATTTAAAAATACACTAATG...........................................................................................3411.001.00----------------------------------------------1.00-----
......................................................GCCTTGGTGGTCTAGTGGTTC...............................................................................................................................................................................2111.001.00-1.00--------------------------------------------------
......................................................GCCTTGGTGGTCTAGTG...................................................................................................................................................................................1711.001.00-1.00--------------------------------------------------
........................................................CTTGGTGGTCTAGTGTTA................................................................................................................................................................................1811.001.00-----------------------------1.00----------------------
............................................................................................................................................................................................................................AGAGATGCCATGGTTCAAATCTGTAGAA..2811.001.00---------1.00------------------------------------------
......................................................GCCTTGGTGGTCTAGTTGTG................................................................................................................................................................................201.000.00------1.00---------------------------------------------
................................................................................GGAATTAATCTCTTCTACCT......................................................................................................................................................201.000.00-----------------------------------------1.00----------
......................................................GCCTTGGTGGTCTAGTGGA.................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------
......................................................GCCTTGGTGGTCTAGTGGTAG...............................................................................................................................................................................2111.001.001.00---------------------------------------------------
......................................................GCCTTGGTGGTCTAGTGCG.................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------
......................................................GCCTTGGTGGTCTAGTCG..................................................................................................................................................................................181.000.00-------------------------------------1.00--------------
......................................................GCCTTGGTGGTCTAGTGGCTA...............................................................................................................................................................................2111.001.00--1.00-------------------------------------------------
......................................................GCCTTGGTGGTCTAGTTG..................................................................................................................................................................................181.000.001.00---------------------------------------------------
......................................................GCCTTGGTGGTCTAGTGCTT................................................................................................................................................................................2011.001.00----------------1.00-----------------------------------
......................................................GCCTTGGTGGTCTAGTGGTG................................................................................................................................................................................2011.001.00------1.00---------------------------------------------
......................................................GCCTTGGTGGTCTAGTGGCTG...............................................................................................................................................................................2111.001.001.00---------------------------------------------------
.......................................................CCTTGGTGGTCTAGTGGATA...............................................................................................................................................................................201.000.00-----1.00----------------------------------------------
....................................................................................................................................................................................................................GGTTTAAAAGAGATGCCATGGTTCA.............2511.001.00---------1.00------------------------------------------
......................................................GCCTTGGTGGTCTAGTGGTTT...............................................................................................................................................................................2111.001.00--1.00-------------------------------------------------
......................................................GCCTTGGTGGTCTAGTGGCTC...............................................................................................................................................................................2111.001.00-1.00--------------------------------------------------
................................................................................................................................................................................................................CACAGGTTTAAAAGAGA.........................1720.500.50-----------------------------------------------0.50----
......................................................GCCTTGGTGGTCTAG.....................................................................................................................................................................................1540.500.50-------------------------------------------------0.250.25-
......................................................GCCTTGGTGGTCTAGGGG..................................................................................................................................................................................1840.500.50---0.50------------------------------------------------
......................................................GCCTTGGTGGTCTAGCGGT.................................................................................................................................................................................1940.250.50-0.25--------------------------------------------------
................................................................................................................................................................................................................................ATGCCATGGTTCAAAT..........1640.250.25---------------------------------------------------0.25
.........................................................................................................AAAAGCTCTGGTGATT.................................................................................................................................1640.250.25------------------------------------------------0.25---
.........................................................................................................AAAAGCTCTGGTGATTGG...............................................................................................................................1840.250.25------------------------------------------------0.25---

Antisense strand
TCTTATGTTACTTAGACACCATGTCTCAGTCATGCTGTCCTGCAATCCTGCCTAGCCTTGGTGGTCTAGTGTTAAAATAGGGAATTAATCTCTTCTGATCCTTAGAAAAGCTCTGGTGATTATTGAAAAAAATAATAACTATTTAAAAATACACTAATGTTGAAAGATTTCTTTATAACTTTTGTAATTTTCTTTGTAAGTTGGAATCCACAGGTTTAAAAGAGATGCCATGGTTCAAATCTGTAGAAGA
....................................................((((.((((((..((((.(((....(((((.((((........)))))))))....))).))))..((((((......))))))...............)))))).))))(((((.....(((((.....)))))...))))).......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577742(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577579(Rovira)
total RNA. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR189783SRR189782SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
...................................GCAGGATTGCAGGACA....................................................................................................................................................................................................... 1620.500.50--------------------0.50-------------------------------