ID: uc010fcp.2_intron_4_0_chr2_62998528_f.3p
GENE: (5)
chr2:63053022-63053271+


(1)
BRAIN
(8)
CELL-LINE
(2)
LIVER
(6)
OTHER
(2)
SKIN
(1)
UTERUS

Sense strand
ATTGCATATCTGCCTTACTTATAAATGTAACAACTGTGATACAACTTCATTGTAATTTTATTTAGTTATTGTGTGATAGGAATGTAATAGGAGAAGGAAGTTTTCAATTATTATTTGATTTATTATTAAAATCGTACTTTAAAATGTTTGGCTATAAAATAACTCAAAATTACATACTTTTTTTTTCTTTAATCTTCCAGGAATCCCCTTCTGGTCGAAGGAAAGCTCTTGCTACTAGCAGCATCAATAT
..............................................................................((((.((...(((((((((((((....(((.....(((((.(((((.(((...(((.((........)).)))...)))))))).))))))))....)))))))))))))...)).))))....................................................
...........................................................................76..........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR343334SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTTAG....................................................2350.000.0022.0017.007.004.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCTTTCAAG........................................................226.000.00--1.004.00-----1.00----------
............................................................................................................................................................................CATACTTTTTTTTTCTTCAAG.........................................................216.000.00--4.002.00----------------
......................................................................................................................................................................AAATTACATACTTTTTTTTTAAAG............................................................244.000.00-3.00--1.00---------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTAAAG............................................................233.000.002.001.00------------------
.............................................................................................................................................................................ATACTTTTTTTTTCTTTAACTG.......................................................223.000.00---3.00----------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATGTGA.....................................................222.000.00------2.00-------------
......................................................................................................................................................................AAATTACATACTTTTTTTTTATAG............................................................242.000.00-2.00------------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTCAG....................................................232.000.00--2.00-----------------
............................................................................................................................................................................CATACTTTTTTTTTCTTTCTTG........................................................222.000.00--1.001.00----------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTTAAG............................................................232.000.00-2.00------------------
.............................................................................................................................................................................ATACTTTTTTTTTCTTACTC.........................................................202.000.002.00-------------------
.....................................................................................................................................................................................................................GTCGAAGGAAAGCTCTTGCTACT..............2312.002.00-----------2.00--------
............................................................................................................................................................AAATAACTCAAAATTACAAG..........................................................................202.000.00--------------1.00--1.00--
............................................................................................................................................................................CATACTTTTTTTTTCTTTAG..........................................................202.000.00--1.001.00----------------
...............................................................................................................................................................................................................CTTCTGGTCGAAGGAAAGCT.......................2012.002.00-----1.00-------1.00------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCAG......................................................212.000.001.00-1.00-----------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTAAAT............................................................232.000.001.001.00------------------
...............................................CATTGTAATTTTATTGTTG........................................................................................................................................................................................191.000.00--------1.00-----------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTTCAAG..................................................251.000.00--1.00-----------------
............................................................................................................................................................................CATACTTTTTTTTTCCAAG...........................................................191.000.00--1.00-----------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTACTCG.......................................................201.000.00--1.00-----------------
..........................................................................................................................................................................TACATACTTTTTTTTTCTTTTTG.........................................................231.000.00---1.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCTCCAA..........................................................201.000.00--1.00-----------------
........................................................................................................................................................................ATTACATACTTTTTTTTTCTTATA..........................................................241.000.00---1.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCTTCG...........................................................191.000.00---1.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCCTCG...........................................................191.000.00---1.00----------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTG......................................................211.000.00---1.00----------------
.............................................................................................................................................................................................................CCCTTCTGGTCGAAGGAAAGCT.......................2211.001.00-------------1.00------
............................................................................................................................................................................CATACTTTTTTTTTCCTTG...........................................................191.000.00--1.00-----------------
................................................................................AATGTAATAGGAGAAGGAAGTTTT..................................................................................................................................................2411.001.00-----1.00--------------
................................................................................................................................................................................................................TTCTGGTCGAAGGAAAGC........................1811.001.00-----1.00--------------
..........................................................................................................................................................................TACATACTTTTTTTTTCTTTCTTG........................................................241.000.00--1.00-----------------
...........................................................................................................................................................................ACATACTTTTTTTTTCTTCTG..........................................................211.000.00---1.00----------------
..........................................................................................................................................................................TACATACTTTTTTTTTCTTTAAG.........................................................231.000.00----------1.00---------
...........................................................................................................................................................................................................................................TAGCAGCATCAATATATTG191.000.00--------1.00-----------
........................................................................................................................................................................ATTACATACTTTTTTTTTTTGT............................................................221.000.001.00-------------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTACAA............................................................231.000.001.00-------------------
...........................................................................................................................................................................ACATACTTTTTTTTTCTTATAT.........................................................221.000.00----------1.00---------
............................................................................................................................................................................CATACTTTTTTTTTCTTTAAT.........................................................2111.001.001.00-------------------
............................................................................................................................................................................CATACTTTTTTTTTCTCCG...........................................................191.000.00--1.00-----------------
........................................................................................................................................................................ATTACATACTTTTTTTTTAAAG............................................................221.000.001.00-------------------
...............................................................................................................................................................................................................CTTCTGGTCGAAGGAAAGC........................1911.001.00-----1.00--------------
.............................................................................................................................................................................ATACTTTTTTTTTCTTTAAAG........................................................211.000.00----1.00---------------
......................................................................................................................................................................AAATTACATACTTTTTTTTTCAAAT...........................................................251.000.00--1.00-----------------
............................................................................................................................................................................CATACTTTTTTTTTCCTGG...........................................................191.000.00-1.00------------------
..............................................................................................................................................................................TACTTTTTTTTTCTTTATGT........................................................201.000.00----1.00---------------
............................................................................................................................................................................CATACTTTTTTTTTCTTTAAAG........................................................221.000.00---1.00----------------
.............................................................................................................................................................................ATACTTTTTTTTTCTTCG...........................................................181.000.00---1.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCTTTCTG.........................................................211.000.00--1.00-----------------
.............................................................................AGGAATGTAATAGGAGAAGGAAGTTT...................................................................................................................................................2611.001.00-----1.00--------------
................................................................................................................................................................................CTTTTTTTTTCTTTAATACAG.....................................................211.000.00--1.00-----------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATTTG......................................................211.000.00------1.00-------------
............................................................................................................................................................................CATACTTTTTTTTTCTTAATG.........................................................211.000.00---1.00----------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTTAA....................................................231.000.001.00-------------------
..........................................................................................................................................................................TACATACTTTTTTTTTCTTCTG..........................................................221.000.00---1.00----------------
............................................................................................................................................................................CATACTTTTTTTTTCTTCTTG.........................................................211.000.00--1.00-----------------
.............................................................................................................................................................................ATACTTTTTTTTTCTTTAATTTT......................................................231.000.00------------1.00-------
...............................................................................................................................................................................ACTTTTTTTTTCTTTATAGG.......................................................201.000.00------------1.00-------
........................................................................................................................................................................ATTACATACTTTTTTTTTATAT............................................................221.000.001.00-------------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTTTTG............................................................231.000.00-1.00------------------
...............................................................................................................................................................................ACTTTTTTTTTCTTTAATCTTA.....................................................221.000.001.00-------------------
.......................................................................................................................................................................AATTACATACTTTTTTTTAAAG.............................................................221.000.00-1.00------------------
............................................................................................................................................................................CATACTTTTTTTTTCTTAAAG.........................................................211.000.00---1.00----------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTATT.............................................................221.000.00-1.00------------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTTAAT............................................................231.000.001.00-------------------
.................................................................................................................................................................................TTTTTTTTTCTTTAATCCTG.....................................................201.000.00----1.00---------------
...........................................................................................................................................................................ACATACTTTTTTTTTCTTAG...........................................................201.000.00--1.00-----------------
.......................................................................................................................................................................AATTACATACTTTTTTTTTTG..............................................................211.000.00-1.00------------------
............................................................................................................................................................................CATACTTTTTTTTTCTCCA...........................................................191.000.00---------1.00----------
...........................................................................................................................................................................ACATACTTTTTTTTTCTTCTTG.........................................................221.000.00---1.00----------------
...........................................................................................................................................................................ACATACTTTTTTTTTCTTACAG.........................................................221.000.00--------1.00-----------
...........................................................................................................................................................................ACATACTTTTTTTTTCTCTT...........................................................201.000.00---------1.00----------
................................................................................................................................................................................CTTTTTTTTTCTTTAATCT.......................................................1940.500.50----0.50---------------
......................................................................................................................................................................AAATTACATACTTTTTTTTAAAG.............................................................2330.330.33-0.33------------------
......................................................................................................................................................................AAATTACATACTTTTTTTT.................................................................1930.330.33----0.33---------------
..............................................................................................................................................................................TACTTTTTTTTTCTTTAAT.........................................................1940.250.25----0.25---------------
..............................................................................................................................................................................TACTTTTTTTTTCTTTAATAG.......................................................2140.250.25---0.25----------------

Antisense strand
ATTGCATATCTGCCTTACTTATAAATGTAACAACTGTGATACAACTTCATTGTAATTTTATTTAGTTATTGTGTGATAGGAATGTAATAGGAGAAGGAAGTTTTCAATTATTATTTGATTTATTATTAAAATCGTACTTTAAAATGTTTGGCTATAAAATAACTCAAAATTACATACTTTTTTTTTCTTTAATCTTCCAGGAATCCCCTTCTGGTCGAAGGAAAGCTCTTGCTACTAGCAGCATCAATAT
..............................................................................((((.((...(((((((((((((....(((.....(((((.(((((.(((...(((.((........)).)))...)))))))).))))))))....)))))))))))))...)).))))....................................................
...........................................................................76..........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR343334SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................AAGTTTTCAATTATTTTCC...................................................................................................................................... 193.000.00-------3.00------------
.................................................................................................................................................................................TTTTTTTTTCTTTAATCTTTTT................................................... 221.000.00---------------1.00----
....................................TGATACAACTTCATTGTA.................................................................................................................................................................................................... 181.000.00------------------1.00-
.................................................................................................................................................................ACTCAAAATTACATACCTAT..................................................................... 201.000.00-------------------1.00
.............................................................................................................................................................................ATACTTTTTTTTTCTTTAAGAA....................................................... 221.000.00----------------1.00---
..............................................................TAGTTATTGTGTGATTTTC......................................................................................................................................................................... 191.000.00----1.00---------------
....AAGTAAGGCAGATATG...................................................................................................................................................................................................................................... 1620.500.50------0.50-------------