ID: uc010fci.2_intron_15_0_chr2_61236151_r.5p
GENE: (2)
chr2:61238700-61238949-


(2)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(1)
LIVER 		(4)
OTHER 		(1)
SKIN

Sense strand
TCAGATTCTGTGGTGTGGATTTTCATGCACCTTACAAACTTCCATACAAGGTATTTTCTTTTCTTTTTTTTTTTTTTTCAAATTAAGAGAAGGTTCTCTGTATTTTACAATGAATGCTTGTACTTTTGAGGGCAGGTATCTATTCATAACTCTTTTTTAAATTAAAAAACTATAATAAAATGAGTGATATTCATAATTTTGGAATAGTCTCAGAAATGTAAGTTCCTTCTTAAGTGATTATATCTAGCTT
........................................................(((((((((..(((.........)))..))))))))).............................................................................................................................................................
..................................................51......................................................107.............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189784SRR189782SRR189785SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR343334SRR040029(GSM532914)
G026T. (cervix)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTAAG..........................................................................................................................................................................2919.000.00-5.005.005.004.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTAAG...............................................................................................................................................................................247.000.00-3.00-3.001.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTAAAG..........................................................................................................................................................................296.000.00-1.001.002.002.00-------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAAATTG.....................................................................................................................................................................295.000.00-1.00-2.002.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTCTG..........................................................................................................................................................................294.000.00-1.002.00-1.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCTTG...........................................................................................................................................................................284.000.00-1.003.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCTTG..........................................................................................................................................................................294.000.00-1.003.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTAATG...........................................................................................................................................................................274.000.00-1.001.001.001.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCTG............................................................................................................................................................................274.000.00-4.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCGG............................................................................................................................................................................273.000.003.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTACTG..........................................................................................................................................................................283.000.00--2.001.00--------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTCGAG.........................................................................................................................................................................293.000.003.00-----------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCGCC........................................................................................................................................................................293.000.002.00----1.00------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCGC.........................................................................................................................................................................253.000.003.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTGG................................................................................................................................................................................233.000.00---2.00-1.00------------
..............................CTTACAAACTTCCATACAAG........................................................................................................................................................................................................2013.003.00--------3.00---------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAATTTG.....................................................................................................................................................................292.000.00--2.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTCG...............................................................................................................................................................................242.000.00-2.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTAAAG.............................................................................................................................................................................262.000.00-1.00-1.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTAG...........................................................................................................................................................................282.000.00---1.001.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTCTG...............................................................................................................................................................................242.000.00-2.00----------------
.............................................................TCTTTTTTTTTTTTTTTCAAAAAC.....................................................................................................................................................................242.000.001.001.00----------------
.........................................................CTTTTCTTTTTTTTTTTTTTTCGGAG.......................................................................................................................................................................262.000.002.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCTTTG.......................................................................................................................................................................322.000.00--2.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCAG.........................................................................................................................................................................302.000.00-1.00----1.00-----------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTAATG.........................................................................................................................................................................292.000.00-1.00-1.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCTAAG.......................................................................................................................................................................322.000.00-2.00----------------
...................................................TATTTTCTTTTCTTTTTTTTAG.................................................................................................................................................................................222.000.00---2.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTCTTG.........................................................................................................................................................................302.000.00-1.00----1.00-----------
........................................................TCTTTTCTTTTTTTTTTTTTTTCGGC........................................................................................................................................................................262.000.002.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTCGG..........................................................................................................................................................................292.000.001.00----1.00------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCGGAG.......................................................................................................................................................................312.000.001.00----1.00------------
....................................................ATTTTCTTTTCTTTTTTTTACTG...............................................................................................................................................................................232.000.00-1.001.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTAAAG..........................................................................................................................................................................282.000.00--2.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTACTG..............................................................................................................................................................................242.000.00-2.00----------------
..............................................................CTTTTTTTTTTTTTTTCAAATACG....................................................................................................................................................................242.000.00--2.00---------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCGGG........................................................................................................................................................................282.000.002.00-----------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCGG.........................................................................................................................................................................282.000.002.00-----------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCGGAG.......................................................................................................................................................................272.000.002.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCG..........................................................................................................................................................................292.000.00--1.001.00--------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTACG...........................................................................................................................................................................272.000.00---1.001.00-------------
....................................................ATTTTCTTTTCTTTTTTTTCCAG...............................................................................................................................................................................232.000.00---1.00--1.00-----------
...................................................TATTTTCTTTTCTTTTTTTTACTG...............................................................................................................................................................................242.000.00--1.001.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCT............................................................................................................................................................................272.000.00-1.00--1.00-------------
....................................................ATTTTCTTTTCTTTTTTTTTTCGG..............................................................................................................................................................................242.000.002.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTCAAG.........................................................................................................................................................................302.000.00-1.001.00---------------
.............................................................TCTTTTTTTTTTTTTTTCACTAG......................................................................................................................................................................232.000.00-1.001.00---------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCGGAG.......................................................................................................................................................................292.000.002.00-----------------
........................ATGCACCTTACAAACTTC................................................................................................................................................................................................................1811.001.00---------1.00--------
.....................................................................................AGAGAAGGTTCTCTGAACG..................................................................................................................................................191.000.00--------------1.00---
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCGGAG.......................................................................................................................................................................301.000.001.00-----------------
...........................................................TTTCTTTTTTTTTTTTTTTCAAGGTT.....................................................................................................................................................................261.000.00-----1.00------------
...................................................TATTTTCTTTTCTTTTTTCAG..................................................................................................................................................................................211.000.00-1.00----------------
............................................................TTCTTTTTTTTTTTTTTTCAAATACC....................................................................................................................................................................261.000.00------1.00-----------
...........................................................TTTCTTTTTTTTTTTTTTTCAACCAG.....................................................................................................................................................................261.000.00-1.00----------------
..................................................................................................................................................TAACTCTTTTTTAAACGA......................................................................................181.000.00----------1.00-------
...................................................TATTTTCTTTTCTTTTTTTTTTTAAAG............................................................................................................................................................................271.000.00---1.00--------------
.............................................................................................................................TTGAGGGCAGGTATCTATTCA........................................................................................................2111.001.00-----------------1.00
..................................................................TTTTTTTTTTTTCAAATTATATC.................................................................................................................................................................231.000.00------1.00-----------
....................................................ATTTTCTTTTCTTTTTTTTTTTTACG............................................................................................................................................................................261.000.00-1.00----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCAATG.......................................................................................................................................................................311.000.00-1.00----------------
............................................................TTCTTTTTTTTTTTTTTTCAAAACCG....................................................................................................................................................................261.000.00--1.00---------------
....................................................................................................................................................ACTCTTTTTTAAATTCATG...................................................................................191.000.00--1.00---------------
..................ATTTTCATGCACCTTACAAACTTCCATACA..........................................................................................................................................................................................................3011.001.00---------1.00--------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTCTGG.........................................................................................................................................................................291.000.001.00-----------------
...........................................................TTTCTTTTTTTTTTTTTTTCAAAAGG.....................................................................................................................................................................261.000.00--1.00---------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCATATG......................................................................................................................................................................301.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCG............................................................................................................................................................................271.000.00-1.00----------------
.............................................................TCTTTTTTTTTTTTTTTCACTTG......................................................................................................................................................................231.000.00----1.00-------------
..........................................................TTTTCTTTTTTTTTTTTTTTCAACTG......................................................................................................................................................................261.000.00----1.00-------------
.............................................................TCTTTTTTTTTTTTTTTCAAGCAG.....................................................................................................................................................................241.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCGG.........................................................................................................................................................................301.000.00------1.00-----------
....................................................ATTTTCTTTTCTTTTTTTTGGAG...............................................................................................................................................................................231.000.001.00-----------------
..........................................................TTTTCTTTTTTTTTTTTTTTCACATG......................................................................................................................................................................261.000.00----1.00-------------
...........................................................TTTCTTTTTTTTTTTTTTTCACCGT......................................................................................................................................................................251.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTACG..........................................................................................................................................................................291.000.00--1.00---------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCGGGG.......................................................................................................................................................................301.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTGGAG.............................................................................................................................................................................261.000.001.00-----------------
..........................GCACCTTACAAACTTCCATACAAG........................................................................................................................................................................................................2411.001.00---------1.00--------
...................................................TATTTTCTTTTCTTTTTTTTTTTACTC............................................................................................................................................................................271.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTCATG.............................................................................................................................................................................261.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCAAG...........................................................................................................................................................................281.000.00--1.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTAACT..........................................................................................................................................................................281.000.00-1.00----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCTAAG.......................................................................................................................................................................311.000.00--1.00---------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCGC.........................................................................................................................................................................271.000.001.00-----------------
..................................................GTATTTTCTTTTCTTTTTTTTTTTTTTCGG..........................................................................................................................................................................301.000.00-----1.00------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCCC.........................................................................................................................................................................291.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCAT...........................................................................................................................................................................281.000.00---1.00--------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCAATT.......................................................................................................................................................................311.000.00-1.00----------------
.......................................................................................................................................................................................................TGGAATAGTCTCAGACTGT................................191.000.00----------------1.00-
...........................................................TTTCTTTTTTTTTTTTTTTCAATTTC.....................................................................................................................................................................261.000.00-1.00----------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCGGC........................................................................................................................................................................291.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTATG...............................................................................................................................................................................241.000.00----1.00-------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAAAG.......................................................................................................................................................................271.000.00--1.00---------------
..........................................................TTTTCTTTTTTTTTTTTTTTCAAGCAG.....................................................................................................................................................................271.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCGG...........................................................................................................................................................................281.000.001.00-----------------
................................................AGGTATTTTCTTTTCTTTTTCGC...................................................................................................................................................................................231.000.001.00-----------------
............................................................TTCTTTTTTTTTTTTTTTCAAGGGA.....................................................................................................................................................................251.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTGGA................................................................................................................................................................................231.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTCG...............................................................................................................................................................................231.000.00----1.00-------------
..............................................................CTTTTTTTTTTTTTTTCAAACACA....................................................................................................................................................................241.000.00--1.00---------------
..............................................................CTTTTTTTTTTTTTTTCAAATTAGAG..................................................................................................................................................................261.000.00------1.00-----------
..............................................................CTTTTTTTTTTTTTTTCAAATTCCT...................................................................................................................................................................251.000.00---1.00--------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTACTC...........................................................................................................................................................................271.000.00----1.00-------------
.............................................................TCTTTTTTTTTTTTTTTCAAGGGG.....................................................................................................................................................................241.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTAACG.........................................................................................................................................................................291.000.00-1.00----------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCAAAG.......................................................................................................................................................................301.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTACTG.........................................................................................................................................................................301.000.00-1.00----------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAAAAAG.....................................................................................................................................................................291.000.00---1.00--------------
.................................................................TTTTTTTTTTTTTCAAATTATCCG.................................................................................................................................................................241.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTAAAC.........................................................................................................................................................................301.000.00--1.00---------------
....................................................ATTTTCTTTTCTTTTTTTTCCTG...............................................................................................................................................................................231.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCTCG...........................................................................................................................................................................281.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTGGA..............................................................................................................................................................................251.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTAGG..........................................................................................................................................................................281.000.00----1.00-------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCTCG........................................................................................................................................................................301.000.00-1.00----------------
.....................................................TTTTCTTTTCTTTTTTTTTTTTTTTCACTG.......................................................................................................................................................................301.000.00-----1.00------------
...........................................................................................................................TTTTGAGGGCAGGTAGAGC............................................................................................................191.000.00-------------1.00----
.......................................................TTCTTTTCTTTTTTTTTTTTTTTCATTTA......................................................................................................................................................................291.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTGGA...............................................................................................................................................................................241.000.00-----1.00------------
.............................................................TCTTTTTTTTTTTTTTTCAAATAAAG...................................................................................................................................................................261.000.00---1.00--------------
...........................CACCTTACAAACTTCCATACAAG........................................................................................................................................................................................................2311.001.00------------1.00-----
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTCGG..........................................................................................................................................................................281.000.001.00-----------------
..........................................................TTTTCTTTTTTTTTTTTTTTCAAAAAG.....................................................................................................................................................................271.000.00-1.00----------------
.............................................................TCTTTTTTTTTTTTTTTCACACG......................................................................................................................................................................231.000.00----1.00-------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCTAG........................................................................................................................................................................301.000.00----1.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTACTG...........................................................................................................................................................................281.000.00----1.00-------------
.............................CCTTACAAACTTCCATACAAG........................................................................................................................................................................................................2111.001.00--------1.00---------
....................................................ATTTTCTTTTCTTTTTTTTATTG...............................................................................................................................................................................231.000.00--1.00---------------
.............................................................TCTTTTTTTTTTTTTTTCACCGG......................................................................................................................................................................231.000.00------1.00-----------
....................................................ATTTTCTTTTCTTTTTTTTTTCGAG.............................................................................................................................................................................251.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTAACT...........................................................................................................................................................................271.000.00---1.00--------------
....................................................ATTTTCTTTTCTTTTTTTTTTCCTG.............................................................................................................................................................................251.000.001.00-----------------
............................................................TTCTTTTTTTTTTTTTTTCAAGTG......................................................................................................................................................................241.000.00-----1.00------------
................................................................................................................................................CATAACTCTTTTTTAACTA.......................................................................................191.000.00----------1.00-------
............................................................TTCTTTTTTTTTTTTTTTCAAATCAG....................................................................................................................................................................261.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCTGG........................................................................................................................................................................311.000.001.00-----------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCACAGG......................................................................................................................................................................301.000.001.00-----------------
......................TCATGCACCTTACAAACTT.................................................................................................................................................................................................................1911.001.00--------1.00---------
..................................................................................................................................................TAACTCTTTTTTAAACTA......................................................................................181.000.00----------1.00-------
...........................................................TTTCTTTTTTTTTTTTTTTCAAAGGG.....................................................................................................................................................................261.000.001.00-----------------
...GATTCTGTGGTGTGGGGG.....................................................................................................................................................................................................................................181.000.00---------------1.00--
...................................................TATTTTCTTTTCTTTTTTTTAATT...............................................................................................................................................................................241.000.00-----1.00------------
....................................................ATTTTCTTTTCTTTTTTTTTTCGGA.............................................................................................................................................................................251.000.001.00-----------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCAAACAG.....................................................................................................................................................................311.000.00------1.00-----------
........................................................TCTTTTCTTTTTTTTTTTTTTTCACAGG......................................................................................................................................................................281.000.00-----1.00------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTCC.............................................................................................................................................................................261.000.001.00-----------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAAATTT.....................................................................................................................................................................291.000.00---1.00--------------
..........................................................TTTTCTTTTTTTTTTTTTTTCATCTG......................................................................................................................................................................261.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTTCAAAG.......................................................................................................................................................................321.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCAGA..........................................................................................................................................................................291.000.001.00-----------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCGGTC.......................................................................................................................................................................271.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTCTTG...............................................................................................................................................................................241.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCTG...........................................................................................................................................................................281.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTAATG..........................................................................................................................................................................291.000.00-1.00----------------
.................................................................TTTTTTTTTTTTTCAAATTACTG..................................................................................................................................................................231.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTAGG.............................................................................................................................................................................261.000.00---1.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTCG................................................................................................................................................................................231.000.00--1.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTACTG...........................................................................................................................................................................271.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTTCAAA..............................................................................................................................................................................251.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTGGC................................................................................................................................................................................231.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTCGTT.................................................................................................................................................................................221.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTCTA..........................................................................................................................................................................281.000.00--1.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTAACG..........................................................................................................................................................................281.000.00--1.00---------------
...................................................TATTTTCTTTTCTTTTTTTTAAAG...............................................................................................................................................................................241.000.00-1.00----------------
..........................................................TTTTCTTTTTTTTTTTTTTTCAACG.......................................................................................................................................................................251.000.00-1.00----------------
....................................................ATTTTCTTTTCTTTTTTCGG..................................................................................................................................................................................201.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTCCG..................................................................................................................................................................................201.000.00--1.00---------------
......................................................TTTCTTTTCTTTTTTTTTTTTTTTCAAGATG.....................................................................................................................................................................311.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTATG..........................................................................................................................................................................291.000.00---1.00--------------
...................................................TATTTTCTTTTCTTTTTTTTTCAAG..............................................................................................................................................................................251.000.00--1.00---------------
....................................................ATTTTCTTTTCTTTTTTTTTCGCC..............................................................................................................................................................................241.000.00-----1.00------------
...................................................TATTTTCTTTTCTTTTTTTATG.................................................................................................................................................................................221.000.00-1.00----------------
.......................................................TTCTTTTCTTTTTTTTTTTTTTTCATTTC......................................................................................................................................................................291.000.00-1.00----------------
.............................................................TCTTTTTTTTTTTTTTTCAAAATCG....................................................................................................................................................................251.000.00-1.00----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTTCGAA.........................................................................................................................................................................301.000.00------1.00-----------
................................................AGGTATTTTCTTTTCTTTTTTTTTTTCT..............................................................................................................................................................................281.000.001.00-----------------
.........................................................CTTTTCTTTTTTTTTTTTTTTCACTTG......................................................................................................................................................................271.000.00--1.00---------------
.........................................................CTTTTCTTTTTTTTTTTTTTTCACTG.......................................................................................................................................................................261.000.00-----1.00------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCTGG........................................................................................................................................................................301.000.001.00-----------------
...................................................TATTTTCTTTTCTTTTTTTTTTTACG.............................................................................................................................................................................261.000.00-1.00----------------
.............................................................TCTTTTTTTTTTTTTTTCAAATCCGG...................................................................................................................................................................261.000.00----1.00-------------
...................................................TATTTTCTTTTCTTTTTTTTTTTTTCTGG..........................................................................................................................................................................291.000.001.00-----------------
................................................AGGTATTTTCTTTTCTGTT.......................................................................................................................................................................................191.000.001.00-----------------
....................................................ATTTTCTTTTCTTTTTTTTTTTTTTTCGGT........................................................................................................................................................................301.000.001.00-----------------
.............................................................TCTTTTTTTTTTTTTTTCAAATCTAG...................................................................................................................................................................261.000.00-1.00----------------
........................................................TCTTTTCTTTTTTTTTTTTTTTCAAACAT.....................................................................................................................................................................291.000.00------1.00-----------
.................................................................TTTTTTTTTTTTTCAAATTAAG...................................................................................................................................................................2260.330.33-0.33----------------
...................................................................TTTTTTTTTTTCAAATTAAG...................................................................................................................................................................2060.170.17------0.17-----------
............................................................TTCTTTTTTTTTTTTTTTCAAATT......................................................................................................................................................................2480.120.12--0.12---------------

Antisense strand
TCAGATTCTGTGGTGTGGATTTTCATGCACCTTACAAACTTCCATACAAGGTATTTTCTTTTCTTTTTTTTTTTTTTTCAAATTAAGAGAAGGTTCTCTGTATTTTACAATGAATGCTTGTACTTTTGAGGGCAGGTATCTATTCATAACTCTTTTTTAAATTAAAAAACTATAATAAAATGAGTGATATTCATAATTTTGGAATAGTCTCAGAAATGTAAGTTCCTTCTTAAGTGATTATATCTAGCTT
........................................................(((((((((..(((.........)))..))))))))).............................................................................................................................................................
..................................................51......................................................107.............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189784SRR189782SRR189785SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR343334SRR040029(GSM532914)
G026T. (cervix)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.................................................................TTTTTTTTTTTTTCAAATTGATG.................................................................................................................................................................. 234.000.00-------4.00----------
..................................................................TTTTTTTTTTTTCAAATTGATG.................................................................................................................................................................. 223.000.00-------3.00----------
.........................................................CTTTTCTTTTTTTTTTTTTTTCAGATC...................................................................................................................................................................... 272.000.00-----------2.00------
................................................................TTTTTTTTTTTTTTCAAATTGAGG.................................................................................................................................................................. 241.000.00-------1.00----------