ID: uc010erg.2_intron_2_0_chr19_54687564_r.3p
GENE: (1)
chr19:54687514-54687763-


(1)
AGO1.ip 		(3)
AGO2.ip 		(5)
B-CELL 		(3)
BRAIN 		(19)
BREAST 		(22)
CELL-LINE 		(6)
CERVIX 		(4)
HEART 		(2)
HELA 		(5)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(13)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CAGAACAGGGAAAGGGGAGGAGGGCCTGGGACTGAGCCCTGGGGAACACCGCCCAGCTAGAGGCGTTACACACAACCTAGATGGGCAGAGCTGCGGGCACCCAGCACCCCTTGGCTGCCGAGGGCAGCCGCGCAAGGGAGATGGGTGTGGGGAAGGGCCCAGAGTCTGACCTGGCCCCTTGCCCACCCCCTTCTGCCCAGCTGGTGAGCCTGGCCAGTGAAGTCCAGGACCTGCATCTGGCCCAGAGGAA
.......................................................................................................................................((((((.(((.(((((.(((((.((((........)))).))))).))))).))).))).)))....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCCAGA.................................................23133.001.008.00-----3.002.00-2.00--1.00-2.00--2.001.00----1.00----1.00-----1.001.00------1.001.00-1.00--------------------1.00-1.00--1.00--1.001.00--------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCCAGT.................................................23112.001.00--------1.00--1.00---------1.00--------1.00--------1.001.00---------1.00------------1.00-1.00-1.00-1.00-------1.00------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAAG...............................................................................................2219.009.007.00----------------------------------------------1.00----------------------------1.00-------
...................................................................................................................................................................................TGCCCACCCCCTTCTGCCCAGA.................................................2218.002.001.00-----------1.00---1.00--1.00----1.00--------1.00-----------------1.00----------------------------1.00---
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAAT...............................................................................................2216.002.005.00---------------------------------------------------------------------1.00-------------
.................................................................................................................................................................GAGTCTGACCTGGCCCCTTGCCC..................................................................2316.006.00----3.003.00------------------------------------------------------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAAGT..............................................................................................2315.009.00--4.00----------------------------------------------------1.00----------------------------
......................................................................................................................................AGGGAGATGGGTGTGGGGAAG...............................................................................................2115.005.004.00----------------------------1.00------------------------------------------------------
......................................................................................................................................AGGGAGATGGGTGTGGGA..................................................................................................183.000.00---3.00--------------------------------------------------------------------------------
.................................................................................................................................................................................CTTGCCCACCCCCTTCTGCCCAGA.................................................243.000.00----------------------------------------------------1.00--------------------1.00---------1.00
......................................................................................................................................AGGGAGATGGGTGTGGGGAAGG..............................................................................................2213.003.003.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................TGCCCACCCCCTTCTGCCCAGT.................................................2212.002.002.00-----------------------------------------------------------------------------------
.......................................................................................................................................GGGAGATGGGTGTGGAATT................................................................................................192.000.00---------------2.00--------------------------------------------------------------------
...................................................................................................................................................................................TGCCCACCCCCTTCTGCCCAG..................................................2112.002.00--------------------------------1.00----1.00----------------------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAA................................................................................................2112.002.00----------2.00-------------------------------------------------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAAGGTTT...........................................................................................262.000.00--------------------2.00---------------------------------------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGG..................................................................................................1912.002.00-------------2.00----------------------------------------------------------------------
.................................................................................................................................................................................................................CTGGCCAGTGAAGTCCAGGACCTGCATCTG...........3012.002.00-------------------------------1.00-------------------------------------------------1.00--
.....CAGGGAAAGGGGAGGAGGGAGA...............................................................................................................................................................................................................................221.000.00--------------------------------------1.00---------------------------------------------
.......GGGAAAGGGGAGGAGGCAGG...............................................................................................................................................................................................................................201.000.00--------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................CAGTGAAGTCCAGGACCTGCA...............2111.001.00---1.00--------------------------------------------------------------------------------
.............................................................................................................CTTGGCTGCCGAGGGCAGCCGC.......................................................................................................................2211.001.00------------------------------------------------------------------------1.00-----------
..............................................................................................................................................................................................................AGCCTGGCCAGTGAAGT...........................1711.001.00------------------------------------------------1.00-----------------------------------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCC.....................................................1911.001.00-------------------------1.00----------------------------------------------------------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCCCGA.................................................231.000.00----------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................AGTGAAGTCCAGGACCTGCATC.............2211.001.00-------------------------------------------------------------------------------1.00----
.........................................................................................................................GGGCAGCCGCGCAAGATTG..............................................................................................................191.000.00--------------------------1.00---------------------------------------------------------
....................................................................................................................................CAAGGGAGATGGGTGTGGA...................................................................................................191.000.00----------------------------------------------1.00-------------------------------------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCAAGA.................................................2311.001.001.00-----------------------------------------------------------------------------------
....................................................................................................................................CAAGGGAGATGGGTGTGGGGAAA...............................................................................................2311.001.00-------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................................TGGTGAGCCTGGCCAGTG...............................1811.001.00--------------------------------------------1.00---------------------------------------
..........................................................................................CTGCGGGCACCCAGCAGGAG............................................................................................................................................201.000.00-----------------------------------------------------------1.00------------------------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCCAG..................................................2211.001.00------------------------------------1.00-----------------------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAATT..............................................................................................2311.002.00--------------------------------------------------------1.00---------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGGAAGTT.............................................................................................2411.009.00------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................TGCCCACCCCCTTCTGCCCCGT.................................................2211.001.00-----------------------------------------1.00------------------------------------------
....................................................................................................................................CAAGGGAGATGGGTGTGGGGAA................................................................................................2211.001.00-------------------------------------------------------------1.00----------------------
....................................................................................................................................CAAGGGAGATGGGTGTGGGGAAGG..............................................................................................2411.001.00---------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................TTGCCCACCCCCTTCTGCCCAGC.................................................2311.001.00---------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................TGCCCACCCCCTTCTGCCC....................................................1911.001.00-------------------------------------------------1.00----------------------------------
.....................................................................................................................................AAGGGAGATGGGTGTGGGATT................................................................................................211.000.00---------------------1.00--------------------------------------------------------------
....................................................................................................................................CAAGGGAGATGGGTGTGGGGA.................................................................................................2111.001.00------------------1.00-----------------------------------------------------------------
..........................................................................................................................................AGATGGGTGTGGGGAAGGGCC...........................................................................................2111.001.00-----------1.00------------------------------------------------------------------------
....................AGGGCCTGGGACTGAGAGAG..................................................................................................................................................................................................................201.000.00----------------------------------------------------------1.00-------------------------
.................................................................................................................................................................................................................CTGGCCAGTGAAGTCCAGG......................1911.001.00----------------------1.00-------------------------------------------------------------
.................................................................................................................................................................................CTTGCCCACCCCCTTCTGCCCA...................................................2211.001.00------------------------------------------------------------------------------1.00-----
......................................................................................................................................................................................................................CAGTGAAGTCCAGGACCTGCAT..............2211.001.00--------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................................................................GGACCTGCATCTGGC.........1580.120.12----------------------0.12-------------------------------------------------------------

Antisense strand
CAGAACAGGGAAAGGGGAGGAGGGCCTGGGACTGAGCCCTGGGGAACACCGCCCAGCTAGAGGCGTTACACACAACCTAGATGGGCAGAGCTGCGGGCACCCAGCACCCCTTGGCTGCCGAGGGCAGCCGCGCAAGGGAGATGGGTGTGGGGAAGGGCCCAGAGTCTGACCTGGCCCCTTGCCCACCCCCTTCTGCCCAGCTGGTGAGCCTGGCCAGTGAAGTCCAGGACCTGCATCTGGCCCAGAGGAA
.......................................................................................................................................((((((.(((.(((((.(((((.((((........)))).))))).))))).))).))).)))....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)
......................................................................................................................................................GGAAGGGCCCAGAGTTCCA................................................................................. 194.000.00-4.00----------------------------------------------------------------------------------
...........................................................................CCTAGATGGGCAGAGCACA............................................................................................................................................................ 191.000.00-----------------------------------------------------1.00------------------------------
.....................................................................................................................CCGAGGGCAGCCGCGGGA................................................................................................................... 181.000.00----------------------------------------------------------------1.00-------------------
....................................................................................................................................................GGGGAAGGGCCCAGAGCAAT.................................................................................. 201.000.00------------------------------------------------------1.00-----------------------------
......................................................................................................................................................GGAAGGGCCCAGAGTTCC.................................................................................. 181.000.00-1.00----------------------------------------------------------------------------------
.AGAACAGGGAAAGGGGAAT...................................................................................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------------1.00-