ID: uc010ejn.1_intron_11_0_chr19_45029278_r.5p
GENE: CEACAM20(1)
chr19:45033281-45033530-


(1)
AGO2.ip 		(1)
B-CELL 		(10)
BRAIN 		(8)
BREAST 		(6)
CELL-LINE 		(6)
CERVIX 		(1)
FIBROBLAST 		(3)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
UTERUS

Sense strand
GGGGCCTGCTGACTCATGGGGACACCACTGGATGGGAATCCTGCTTTCAGGTGAGTGCCCTGCTTCCTTCAGATGCGGGAGGAGGGAGGTTGTATGCATCTATTTGTCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTCGAGGAAAAAGAGATGGAGGCAGAGAAAAAAAATAGAGACACAGAGACAGAGACAGAAATAAAGACAGATACAGATATAAAGATAGGGCCAGGCG
.........................................................................(((..((.(((..(((.((....))))).))).)).)))..........................................................................................................................................
........................................................................73.......................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR343334SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040040(GSM532925)
G612N. (cervix)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040023(GSM532908)
G575T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040038(GSM532923)
G531N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532886(GSM532886)
G850T. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
.............................................................................GGAGGAGGGAGGTTGTATAGTT.......................................................................................................................................................2217.000.006.00--1.00-----1.00-----2.001.00--2.00---------1.00--1.001.00------1.00-----
..............................................................................GAGGAGGGAGGTTGTATAGTT.......................................................................................................................................................216.000.005.00---------------------------1.00-----------------
.............................................................................GGAGGAGGGAGGTTGTATAGT........................................................................................................................................................215.000.002.00----------------1.00---1.00-----1.00------------------
.............................................................................GGAGGAGGGAGGTTGTATAG.........................................................................................................................................................203.000.00-3.00--------------------------------------------
..............................................................................GAGGAGGGAGGTTGTATAGT........................................................................................................................................................203.000.003.00---------------------------------------------
...........................................................................................................CAGCGGTGTGTGTGTGTTG............................................................................................................................192.000.00------------2.00---------------------------------
.............................................................................GGAGGAGGGAGGTTGTATTGGT.......................................................................................................................................................222.000.00----1.00----------------------------------1.00------
..............................................................................................................CGGTGTGTGTGTGTGTGTGTGTATG...................................................................................................................252.000.00--2.00-------------------------------------------
..............................................................................GAGGAGGGAGGTTGTATAG.........................................................................................................................................................192.000.00-2.00--------------------------------------------
.............................................................................................ATGCATCTATTTGTCAGAC..........................................................................................................................................192.000.00----------------------------------1.00------1.00----
.............................................................................GGAGGAGGGAGGTTGTATGGTT.......................................................................................................................................................222.000.00-----2.00----------------------------------------
.................................................................CCTTCAGATGCGGGAGGAGGG....................................................................................................................................................................2112.002.00-------------------------1.001.00-------------------
...............................................................TTCCTTCAGATGCGGGAGGAGGG....................................................................................................................................................................2311.001.00--------------1.00-------------------------------
..................................................................CTTCAGATGCGGGAGGAGGGAGG.................................................................................................................................................................2311.001.00------------------------1.00---------------------
...............................................................................................................................................................GAAAAAGAGATGGAGGCACA.......................................................................201.000.00----1.00-----------------------------------------
..............................................................................GAGGAGGGAGGTTGTATTGTT.......................................................................................................................................................211.000.00------------------------------------------1.00---
..............................................................................GAGGAGGGAGGTTGTATGGT........................................................................................................................................................201.000.00-----1.00----------------------------------------
...............................................................................AGGAGGGAGGTTGTATACGT.......................................................................................................................................................201.000.001.00---------------------------------------------
................................................................................GGAGGGAGGTTGTATGGTAA......................................................................................................................................................201.000.00--------------------------------------1.00-------
..............................................................................GAGGAGGGAGGTTGTATGGTTT......................................................................................................................................................221.000.00--------1.00-------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATGGTA.......................................................................................................................................................221.000.00-----------------1.00----------------------------
..............................................................................GAGGAGGGAGGTTGTATTTTT.......................................................................................................................................................211.000.001.00---------------------------------------------
..............................................................................GAGGAGGGAGGTTGTATCGTT.......................................................................................................................................................211.000.00----------------1.00-----------------------------
.................................................................................GAGGGAGGTTGTATGGTT.......................................................................................................................................................181.000.00-------------1.00--------------------------------
..............................................................................................................CGGTGTGTGTGTGTGTGTGTGTGTGTGTGGAC............................................................................................................321.000.00-----------1.00----------------------------------
.............................................................................GGAGGAGGGAGGTTGTATTGA........................................................................................................................................................211.000.00--------1.00-------------------------------------
................................................................................GGAGGGAGGTTGTATGGT........................................................................................................................................................181.000.00-----------1.00----------------------------------
.............................................................................GGAGGAGGGAGGTTGTATGGGT.......................................................................................................................................................221.000.00------------------------------------1.00---------
.............................................................................GGAGGAGGGAGGTTGTATATTT.......................................................................................................................................................221.000.00----------1.00-----------------------------------
..............................................................................GAGGAGGGAGGTTGTATATTT.......................................................................................................................................................211.000.00----------1.00-----------------------------------
..............................................................................GAGGAGGGAGGTTGTATCTTT.......................................................................................................................................................211.000.00---------1.00------------------------------------
.............................................................................................................GCGGTGTGTGTGTGTGTGTGCGTT.....................................................................................................................241.000.00-------1.00--------------------------------------
...............................................................................AGGAGGGAGGTTGTATAAGA.......................................................................................................................................................201.000.00--------------------1.00-------------------------
......................................................................................AGGTTGTATGCATCTGAA..................................................................................................................................................181.000.00-----------------------------------1.00----------
..............................................................................GAGGAGGGAGGTTGTATAACT.......................................................................................................................................................211.000.001.00---------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATAGGT.......................................................................................................................................................221.000.00----1.00-----------------------------------------
.............................................................................GGAGGAGGGAGGTTGTAAAG.........................................................................................................................................................201.000.00-1.00--------------------------------------------
...............................................................................AGGAGGGAGGTTGTATAGTT.......................................................................................................................................................201.000.001.00---------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATAGTG.......................................................................................................................................................221.000.00---1.00------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATAGTC.......................................................................................................................................................221.000.001.00---------------------------------------------
.........................................................................TGCGGGAGGAGGGAGAGTG..............................................................................................................................................................191.000.00-------1.00--------------------------------------
................................................................................GGAGGGAGGTTGTATAGTT.......................................................................................................................................................191.000.00-----------------------1.00----------------------
.........................................................................TGCGGGAGGAGGGAGTAT...............................................................................................................................................................181.000.00-1.00--------------------------------------------
................................................................................GGAGGGAGGTTGTATGGC........................................................................................................................................................181.000.00---1.00------------------------------------------
..............................................................................GAGGAGGGAGGTTGTATGGGTT......................................................................................................................................................221.000.001.00---------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATT..........................................................................................................................................................191.000.00-------------1.00--------------------------------
..........................................................CCTGCTTCCTTCAGATGCGGGAGGCGGG....................................................................................................................................................................281.000.00--------------1.00-------------------------------
............................................................................................................AGCGGTGTGTGTGTGTGTGTGGCG......................................................................................................................241.000.00--1.00-------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTATGGGCC......................................................................................................................................................231.000.00-------------------------------------1.00--------
.............................................................................GGAGGAGGGAGGTTGGACA..........................................................................................................................................................191.000.00------------------1.00---------------------------
.............................................................................GGAGGAGGGAGGTTGTATATT........................................................................................................................................................211.000.001.00---------------------------------------------
.........................................................................TGCGGGAGGAGGGAGGAAAG.............................................................................................................................................................201.000.00-1.00--------------------------------------------
.............................................................................GGAGGAGGGAGGTTGTACAG.........................................................................................................................................................201.000.00-1.00--------------------------------------------
................................................................................GGAGGGAGGTTGTATAGT........................................................................................................................................................181.000.00------------------1.00---------------------------
................................................................................................................................................................AAAAAGAGATGGAGGCCATG......................................................................201.000.00--------------------1.00-------------------------
.............................................................................GGAGGAGGGAGGTTGTATGGTTT......................................................................................................................................................231.000.001.00---------------------------------------------
..............................................................................GAGGAGGGAGGTTGTATCGGG.......................................................................................................................................................211.000.001.00---------------------------------------------

Antisense strand
GGGGCCTGCTGACTCATGGGGACACCACTGGATGGGAATCCTGCTTTCAGGTGAGTGCCCTGCTTCCTTCAGATGCGGGAGGAGGGAGGTTGTATGCATCTATTTGTCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTCGAGGAAAAAGAGATGGAGGCAGAGAAAAAAAATAGAGACACAGAGACAGAGACAGAAATAAAGACAGATACAGATATAAAGATAGGGCCAGGCG
.........................................................................(((..((.(((..(((.((....))))).))).)).)))..........................................................................................................................................
........................................................................73.......................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR343334SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040040(GSM532925)
G612N. (cervix)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040023(GSM532908)
G575T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577741(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040038(GSM532923)
G531N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532886(GSM532886)
G850T. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................................................................................................CAGATACAGATATAACAT............ 181.000.00-------------------------------1.00--------------
..............................................................................................................CGGTGTGTGTGTGTGTGTGTGTGTGAGTA............................................................................................................... 291.000.00--1.00-------------------------------------------
..............................................................................................................................................................GGAAAAAGAGATGGAAG........................................................................... 171.000.00------1.00---------------------------------------
................................................................................................................................................................................AGAGAAAAAAAATAGAGATTA..................................................... 211.000.00--------------------------------------------1.00-
...........................................................................................................CAGCGGTGTGTGTGTGTGTGTGTGTCCT................................................................................................................... 281.000.00--1.00-------------------------------------------
.............................................................................................................CACACACACACACACACACCGC....................................................................................................................... 2201.001.00------------------------------1.00---------------
.....................................................AGTGCCCTGCTTCCTGAT................................................................................................................................................................................... 181.000.00----------------------1.00-----------------------
.................................................................................................................................................................................GAGAAAAAAAATAGAGAAG...................................................... 191.000.00-------------------------------------------1.00--
..............................................................................................................CGGTGTGTGTGTGTGTGTGTGTGTGTAGG............................................................................................................... 291.000.00--1.00-------------------------------------------
...................................................................................................................................................................................................................................AGATATAAAGATAGGATG..... 181.000.00------1.00---------------------------------------
.....................................................................CTCCTCCCGCATCTG...................................................................................................................................................................... 1560.170.17---------------------------------------------0.17