ID: uc010ehe.1_intron_4_0_chr19_41354669_r.5p
GENE: CYP2A6(1)
chr19:41355952-41356201-


(8)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(18)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(11)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(4)
SKIN

Sense strand
GAAACTACCTGCAGCTGAACACAGAGCAGATGTACAACTCCCTCATGAAGGTGTCCCAAGGCAGGGAGATGGGTGGCACGGGGTGGGGGCTGCCTAGTTGGCTGGGGCTTTGTGGCAGGGGGTTGACCAGTGTGGACCAGAGTCTTAGGAAATGGAGTTTTGGAGTTTCAGCATCAGAAAGACAGGATCTTGGGATGTCCAGCTCCCTGACTGTGAGAACCTGGGTGCGAAGCATCCCAGCACATGACAT
..........................................................................................................(((.....(((..((.....))..)))...(((((((((........))).))))))......)))..............................................................................
.........................................................................................................106................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577741(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343335SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................................................AAATGGAGTTTTGGAGCAGG.................................................................................20170.000.0099.0017.008.008.00--4.004.00-4.00-2.001.001.001.003.003.001.00--2.00-1.00-1.001.00--1.00----1.001.001.00-----1.00---1.001.00-1.001.00----------
......................................................................................................................................................AATGGAGTTTTGGAGCAGG.................................................................................1942.000.001.008.009.009.00---1.00---2.003.001.002.00------2.001.002.00-1.00----------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCAG..................................................................................1912.000.001.001.00----2.001.00-1.00---1.00---1.00------1.00------1.00----1.00-1.00---------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGAAGG.................................................................................2011.000.005.002.001.001.00---------------1.00-----------------1.00----------------------
.....................................................................................................................................................AAATGGAGTTTTGGAAATA..................................................................................195.000.003.001.00----------------1.00-----------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCATG.................................................................................204.000.003.00----------------------------------------------1.00------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCACT.................................................................................202.000.00--1.001.00--------------------------------------------------------
....................ACAGAGCAGATGTACAACTC..................................................................................................................................................................................................................2021.501.50----1.50-------------------------------------------------------
.....................CAGAGCAGATGTACAACT...................................................................................................................................................................................................................1821.501.50----1.50-------------------------------------------------------
......................AGAGCAGATGTACAACTCCC................................................................................................................................................................................................................2021.501.50----0.50-------------0.50-----------------------------------0.50-----
........................AGCAGATGTACAACTCCCTC..............................................................................................................................................................................................................2021.501.50--------------------------1.00------------0.50--------------------
................GAACACAGAGCAGATGTACAACTCCCT...............................................................................................................................................................................................................2721.501.50----1.00---0.50---------------------------------------------------
......................................................................................................................................................AATGGAGTTTTGGAGCA...................................................................................171.000.00-----------------1.00------------------------------------------
............................................................................................................................................................................................................CCCTGACTGTGAGAACCTGGGTGCGAAG..................2811.001.00--------1.00---------------------------------------------------
..............................................................................................................TGTGGCAGGGGGTTGATCAG........................................................................................................................201.000.00-----1.00------------------------------------------------------
................GAACACAGAGCAGATGTACAACTCC.................................................................................................................................................................................................................2521.001.00----1.00-------------------------------------------------------
................GAACACAGAGCAGATGTACA......................................................................................................................................................................................................................2021.001.00----1.00-------------------------------------------------------
.............GCTGAACACAGAGCAGATGTACAACTCC.................................................................................................................................................................................................................2821.001.00----0.50---0.50---------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCAA..................................................................................191.000.00--------------------------------------------------1.00---------
........................................................................................................................................................................CAGCATCAGAAAGACAGGATCT............................................................2211.001.00--------1.00---------------------------------------------------
..............................................................................................................TGTGGCAGGGGGTTGAACTG........................................................................................................................201.000.00---------------------------1.00--------------------------------
..............................................................................................................TGTGGCAGGGGGTTGTAAA.........................................................................................................................191.000.00-------------------------------------------1.00----------------
................GAACACAGAGCAGATGTACAACTC..................................................................................................................................................................................................................2421.001.00----1.00-------------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCAGC.................................................................................201.000.00-------------------1.00----------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGAAGA.................................................................................201.000.001.00-----------------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGTTTGGTG..............................................................................231.000.00----------1.00-------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCACG.................................................................................201.000.001.00-----------------------------------------------------------
..............................................................................................................TGTGGCAGGGGGTTGTGGT.........................................................................................................................191.000.00-----------------------------1.00------------------------------
..............................................................................................................TGTGGCAGGGGGTTGTGT..........................................................................................................................181.000.00--------------------------------1.00---------------------------
........................AGCAGATGTACAACTCCCT...............................................................................................................................................................................................................1921.001.00-----------------------------------------------------0.50---0.50--
..............................................................................................................TGTGGCAGGGGGTTGACGAG........................................................................................................................201.000.00-----1.00------------------------------------------------------
..........................................................................................................................................................................GCATCAGAAAGACAGGATCT............................................................2011.001.00----1.00-------------------------------------------------------
.......................................................................................................................................................ATGGAGTTTTGGAGTGGTG................................................................................191.000.00----------1.00-------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCAGA.................................................................................201.000.001.00-----------------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAGCG...................................................................................181.000.00-1.00----------------------------------------------------------
.............GCTGAACACAGAGCAGATGTACAACTC..................................................................................................................................................................................................................2721.001.00----1.00-------------------------------------------------------
......................AGAGCAGATGTACAACTCC.................................................................................................................................................................................................................1921.001.00----0.50-----------------------------------------------0.50-------
........................................................................................GCTGCCTAGTTGGCTGGGGA..............................................................................................................................................201.000.00------------------------------------------1.00-----------------
.......................................................................................................................................................ATGGAGTTTTGGAGTTGGGG...............................................................................201.000.00----------1.00-------------------------------------------------
.......................................................................................................................................................ATGGAGTTTTGGAGTTGGGA...............................................................................201.000.00----------1.00-------------------------------------------------
............................GATGTACAACTCCCTCATGAAGATC.....................................................................................................................................................................................................251.000.00----1.00-------------------------------------------------------
...................................................................................................................................................................................................................TGTGAGAACCTGGGTGCGAA...................2011.001.00--------1.00---------------------------------------------------
.....................................................................................................................................................AAATGGAGTTTTGGAAATG..................................................................................191.000.001.00-----------------------------------------------------------
...........................................................................................GCCTAGTTGGCTGGGGCTTTGTGGCA.....................................................................................................................................2620.500.50----0.50-------------------------------------------------------
.................AACACAGAGCAGATGTACAACTCCC................................................................................................................................................................................................................2520.500.50----------------------------------------------------------0.50-
..............................................GAAGGTGTCCCAAGGC............................................................................................................................................................................................1640.500.50--------------------------------------------------------0.50---
.............................................................................................................TTGTGGCAGGGGGTTGA............................................................................................................................1720.500.50-------------------------------------------------------0.50----
.............GCTGAACACAGAGCAGATGT.........................................................................................................................................................................................................................2020.500.50---------------------------------------0.50--------------------
................GAACACAGAGCAGATGTACAACTCCC................................................................................................................................................................................................................2620.500.50----0.50-------------------------------------------------------
........................AGCAGATGTACAACTCCC................................................................................................................................................................................................................1820.500.50----0.50-------------------------------------------------------
...................CACAGAGCAGATGTACAACTCCC................................................................................................................................................................................................................2320.500.50----0.50-------------------------------------------------------
.......................GAGCAGATGTACAACTCCC................................................................................................................................................................................................................1920.500.50----0.50-------------------------------------------------------
.................AACACAGAGCAGATGTACAACTC..................................................................................................................................................................................................................2320.500.50--------0.50---------------------------------------------------
........................AGCAGATGTACAACTCCCTCAT............................................................................................................................................................................................................2220.500.50------------------0.50-----------------------------------------
............AGCTGAACACAGAGCAGAT...........................................................................................................................................................................................................................1920.500.50---------------------------------------------------0.50--------
...............TGAACACAGAGCAGATGTACAACTCC.................................................................................................................................................................................................................2620.500.50----0.50-------------------------------------------------------
...............TGAACACAGAGCAGATGTACAACT...................................................................................................................................................................................................................2420.500.50--------------------------0.50---------------------------------
............AGCTGAACACAGAGCAGATGTA........................................................................................................................................................................................................................2220.500.50--------0.50---------------------------------------------------
.......CCTGCAGCTGAACACAGAG................................................................................................................................................................................................................................1930.330.33------------------0.33-----------------------------------------
.......CCTGCAGCTGAACACAGAGC...............................................................................................................................................................................................................................2030.330.33---------------------------------------------------0.33--------
...........................................CATGAAGGTGTCCCAAGGCAG..........................................................................................................................................................................................2130.330.33--------0.33---------------------------------------------------
.........................................................AAGGCAGGGAGATGGGTG...............................................................................................................................................................................1840.250.25------------------0.25-----------------------------------------
............................................................................CACGGGGTGGGGGCTG..............................................................................................................................................................1670.140.14-----------------------------------------------------------0.14

Antisense strand
GAAACTACCTGCAGCTGAACACAGAGCAGATGTACAACTCCCTCATGAAGGTGTCCCAAGGCAGGGAGATGGGTGGCACGGGGTGGGGGCTGCCTAGTTGGCTGGGGCTTTGTGGCAGGGGGTTGACCAGTGTGGACCAGAGTCTTAGGAAATGGAGTTTTGGAGTTTCAGCATCAGAAAGACAGGATCTTGGGATGTCCAGCTCCCTGACTGTGAGAACCTGGGTGCGAAGCATCCCAGCACATGACAT
..........................................................................................................(((.....(((..((.....))..)))...(((((((((........))).))))))......)))..............................................................................
.........................................................................................................106................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577741(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343335SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
..........................................................................GGCACGGGGTGGGGGCTC.............................................................................................................................................................. 183.000.00------------------------------1.00---------1.00---1.00---------------
..............................TGTACAACTCCCTCAGTTT......................................................................................................................................................................................................... 192.000.00-----2.00------------------------------------------------------
..............................TGTACAACTCCCTCAG............................................................................................................................................................................................................ 162.000.00-----2.00------------------------------------------------------
..............................TGTACAACTCCCTCAGTT.......................................................................................................................................................................................................... 181.000.00-----1.00------------------------------------------------------