ID: uc010egh.1_intron_5_0_chr19_39374397_r.5p
GENE: (6)
chr19:39379527-39379776-


(1)
AGO1.ip 		(2)
AGO2.ip 		(2)
B-CELL 		(4)
BRAIN 		(4)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(1)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
UTERUS

Sense strand
TCATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCGCTGCTACACGCAGGTAGGCGGATGCGAGCATCCTGGGAGGAGGATGGGCGGGTGGAACGGGCATGGTGTCCTCAGCAGAGGAGCAGAGCTGCGTGCCCAAGAGCTCAGGCGGGGACTCCAGCAATGCGGGGCCAGGGCTTGGCCTACTGCCTCCTTGCTGCATGACCTGCCGTGAGTCACGTCTTCTCTGCCTCAGTTTCCCCTTCCGTCAAA
........................................................................................((((..(((((.((((.(((((....)))))(((..((((.((.(((....((....)).)))))..))))..)))...))))..)))))..))))..................................................................
.....................................................................................86................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189782SRR189787SRR189786SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040012(GSM532897)
G648N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		GSM532887(GSM532887)
G761N. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................TGCGGGGCCAGGGCTAACA......................................................................19212.000.00173.0014.007.004.003.00--1.001.00--1.002.00------1.00-1.00-----1.00----1.001.00-------1.00---
.................................................................................................................................................................TGCGGGGCCAGGGCTAAC.......................................................................1851.000.0042.002.002.002.001.00---1.00-------1.00----------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTACAG.....................................................................2023.000.0022.00----------------------1.00---------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAA........................................................................1711.000.003.001.001.004.002.00----------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTA.........................................................................1610.000.005.00--5.00-----------------------------------------
.....................AGGGGCTACTCCTGCGCTGCTACACG...........................................................................................................................................................................................................2613.003.00-----3.00---------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTATAG.....................................................................202.000.001.00-1.00------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTGACA......................................................................192.000.001.00-1.00------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAAT.......................................................................182.000.001.00-1.00------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTCAC.......................................................................182.000.001.00-1.00------------------------------------------
..........................................................................................GGAACGGGCATGGTGGAA..............................................................................................................................................182.000.00-------------1.00--------1.00----------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAACT......................................................................192.000.002.00--------------------------------------------
........CTGCTGAAGGACAAGGGG................................................................................................................................................................................................................................1812.002.00-----------------1.00------------1.00--------------
.................................................................................................................................................................TGCGGGGCCAGGGCTACCA......................................................................192.000.00--2.00------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTGAC.......................................................................181.000.00--1.00------------------------------------------
............TGAAGGACAAGGGGCTACTCCTGC......................................................................................................................................................................................................................2411.001.00--------------------1.00------------------------
..............AAGGACAAGGGGCTACTCC.........................................................................................................................................................................................................................1911.001.00--------------1.00------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAGCA......................................................................191.000.001.00--------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTATTG......................................................................191.000.001.00--------------------------------------------
..............................................................................GGATGGGCGGGTGGAACG..........................................................................................................................................................1811.001.00------------------------1.00--------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTACA......................................................................191.000.001.00--------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTTCA......................................................................191.000.00--1.00------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTTCAG.....................................................................201.000.00---1.00-----------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTGCAG.....................................................................201.000.001.00--------------------------------------------
.....................................................................CTGGGAGGAGGATGGT.....................................................................................................................................................................161.000.00----------------------------------1.00----------
..........................................................................................GGAACGGGCATGGTGGA...............................................................................................................................................171.000.00-------------------------------------1.00-------
.........TGCTGAAGGACAAGGGG................................................................................................................................................................................................................................1711.001.00---------------------------------------1.00-----
.................................................................................................................................................................TGCGGGGCCAGGGCTTACAC.....................................................................201.000.00-1.00-------------------------------------------
.........TGCTGAAGGACAAGGGGCTAC............................................................................................................................................................................................................................2111.001.00-----1.00---------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTAGAG.....................................................................201.000.001.00--------------------------------------------
..........................................................................................GGAACGGGCATGGTGAAA..............................................................................................................................................181.000.00-------------1.00-------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAGAG......................................................................191.000.00---1.00-----------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAT........................................................................171.000.00-1.00-------------------------------------------
...............AGGACAAGGGGCTACTCCT........................................................................................................................................................................................................................1911.001.00-----------1.00---------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAATA......................................................................191.000.001.00--------------------------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTAAAA......................................................................191.000.00------------------------------------1.00--------
................GGACAAGGGGCTACTCCTGCGCT...................................................................................................................................................................................................................2311.001.00------------------1.00--------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTACTG.....................................................................201.000.00-1.00-------------------------------------------
.............GAAGGACAAGGGGCTACTCCTGC......................................................................................................................................................................................................................2311.001.00-------------------------1.00-------------------
......................................................GCGGATGCGAGCATC.....................................................................................................................................................................................1511.001.001.00--------------------------------------------
.....................................................................................................................................CCAAGAGCTCAGGCGGGGACTCCA.............................................................................................2411.001.00---------1.00-----------------------------------
.....CGCCTGCTGAAGGACAAGGGGC...............................................................................................................................................................................................................................2211.001.00---------1.00-----------------------------------
.............................................................................................................CAGCAGAGGAGCAGAATTA..........................................................................................................................191.000.00------1.00--------------------------------------
.........................................................................................................................................GAGCTCAGGCGGGGATGCG..............................................................................................191.000.00--------------------------------------1.00------
..........GCTGAAGGACAAGGGGCT..............................................................................................................................................................................................................................1811.001.00-------------------------------1.00-------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTACAT.....................................................................201.000.001.00--------------------------------------------
................................................................................ATGGGCGGGTGGAACGGGCATGGTGTCCCCAG..........................................................................................................................................321.000.00----------1.00----------------------------------
................GGACAAGGGGCTACTCCTGCGC....................................................................................................................................................................................................................2211.001.00-----------------------------1.00---------------
................................................................................................................................................GGCGGGGACTCCAGCTG.........................................................................................171.000.00---------------1.00-----------------------------
.................................................................................................................................................................TGCGGGGCCAGGGCTTTTAG.....................................................................201.000.001.00--------------------------------------------
..........GCTGAAGGACAAGGGGCTACTCCTGCG.....................................................................................................................................................................................................................2711.001.00------1.00--------------------------------------
..........GCTGAAGGACAAGGGGCTACTCCTG.......................................................................................................................................................................................................................2511.001.00-------1.00-------------------------------------
...............AGGACAAGGGGCTACTCCTGCGCT...................................................................................................................................................................................................................2411.001.00------1.00--------------------------------------
..............AAGGACAAGGGGCTACTCCTG.......................................................................................................................................................................................................................2111.001.00-------1.00-------------------------------------
..........GCTGAAGGACAAGGGGC...............................................................................................................................................................................................................................1720.500.50--------------0.50------------------------------

Antisense strand
TCATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCGCTGCTACACGCAGGTAGGCGGATGCGAGCATCCTGGGAGGAGGATGGGCGGGTGGAACGGGCATGGTGTCCTCAGCAGAGGAGCAGAGCTGCGTGCCCAAGAGCTCAGGCGGGGACTCCAGCAATGCGGGGCCAGGGCTTGGCCTACTGCCTCCTTGCTGCATGACCTGCCGTGAGTCACGTCTTCTCTGCCTCAGTTTCCCCTTCCGTCAAA
........................................................................................((((..(((((.((((.(((((....)))))(((..((((.((.(((....((....)).)))))..))))..)))...))))..)))))..))))..................................................................
.....................................................................................86................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189782SRR189787SRR189786SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040012(GSM532897)
G648N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		GSM532887(GSM532887)
G761N. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................CATCCTGGGAGGAGGAGTG...................................................................................................................................................................... 191.000.00----1.00----------------------------------------
..........................................................................................................................................AGCTCAGGCGGGGACTGAC............................................................................................. 191.000.00----------1.00----------------------------------
.........................................................................................................................................................................................................................................TTTCCCCTTCCGTCAAGC 181.000.00-----------------------------------1.00---------
..................................................................................................................................................................................GCCTACTGCCTCCTTGCGT..................................................... 191.000.00--------------------------1.00------------------
.............................................................................................................................................................................................................................TCTCTGCCTCAGTTTCCTC.......... 191.000.00----------------------------------------1.00----
..........................................................................................................................................................................................................................TCTTCTCTGCCTCAGTGTG............. 191.000.00----------------------------1.00----------------
..........................................................................................................................................................................................................................GGGAAACTGAGGCAGAGAAGA........... 2120.500.50------------------------------------------0.50--
.........................................................................................................................................................................................TCATGCAGCAAGGAGGC................................................ 1730.330.33-------------------------------------------0.33-
....................................................................................................................................................................................GCAAGGAGGCAGTAG....................................................... 1570.140.14--------------------------------------------0.14