ID: uc010efz.1_intron_13_0_chr19_38910903_r.5p
GENE: (1)
chr19:38911348-38911597-


(2)
B-CELL
(9)
BREAST
(19)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(1)
OTHER
(14)
SKIN

Sense strand
ACAGGGGACACCCAGGAGCTGAGACGGCTGCAGATCTGTCACCTGGTCAGGTAGGGCTGGGCCGAGATCCCCACTCTCAGGACCCACGACTTCCATCCTGCTTCCCCCTCAAAAAACATTCCTCAGAGAATCCCCAGGCCAGTTCCCACAGACCCAACCAGCCCCACAGGCCAAAATCCCACTTCTGAGACACCTGTAGCTTGGTTCCTAAGACCCTCTTAGTTCCGTTCCTTAGAACCCCCACTTCCTA
.........................................................................................................................(((((((........((...(((......)))....)).(((.....)))...........))))))).............................................................
......................................................................................................103..............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189782TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................ATCCCACTTCTGAGACCA.........................................................1848.000.0010.006.00-3.001.003.00-2.002.00---1.00-1.001.001.001.001.001.001.00-1.00--1.00---1.001.00-1.00-1.001.001.00---1.001.00-1.001.001.00----
..............................................................................................................................................................................AATCCCACTTCTGAGACCA.........................................................193.000.00------------------------1.00---1.00---------1.00-----------
................................................................................................................................................................................TCCCACTTCTGAGACCA.........................................................172.000.00---------------------1.00---------------1.00------------
...............................................................................................................................................................................ATCCCACTTCTGAGACCT.........................................................181.000.00---------------------------1.00----------------------
...GGGGACACCCAGGAGCTGAGACGG...............................................................................................................................................................................................................................2411.001.00-----------1.00--------------------------------------
...GGGGACACCCAGGAGCTGAGACGGC..............................................................................................................................................................................................................................2511.001.00----1.00---------------------------------------------
................................GATCTGTCACCTGGTCGG........................................................................................................................................................................................................181.000.00---------------------------------------1.00----------
...........................................................................................................CTCAAAAAACATTCCTTAG............................................................................................................................191.000.00------1.00-------------------------------------------
.....................................................................CCCACTCTCAGGACCCACGACTTCCATCC........................................................................................................................................................2911.001.00-------------------------------1.00------------------
....GGGACACCCAGGAGCTGAGACGGC..............................................................................................................................................................................................................................2411.001.00-----------1.00--------------------------------------
....GGGACACCCAGGAGCTGAGAC.................................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00--
...GGGGACACCCAGGAGCTGAGACAG...............................................................................................................................................................................................................................241.000.00----------1.00---------------------------------------
..........CCCAGGAGCTGAGACG................................................................................................................................................................................................................................1630.330.33-------------------------------------------------0.33

Antisense strand
ACAGGGGACACCCAGGAGCTGAGACGGCTGCAGATCTGTCACCTGGTCAGGTAGGGCTGGGCCGAGATCCCCACTCTCAGGACCCACGACTTCCATCCTGCTTCCCCCTCAAAAAACATTCCTCAGAGAATCCCCAGGCCAGTTCCCACAGACCCAACCAGCCCCACAGGCCAAAATCCCACTTCTGAGACACCTGTAGCTTGGTTCCTAAGACCCTCTTAGTTCCGTTCCTTAGAACCCCCACTTCCTA
.........................................................................................................................(((((((........((...(((......)))....)).(((.....)))...........))))))).............................................................
......................................................................................................103..............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189782TAX577741(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
....................................................................CCCCACTCTCAGGACGC..................................................................................................................................................................... 174.000.00--4.00-----------------------------------------------
....................................................................................................CTTCCCCCTCAAAAATGAA................................................................................................................................... 191.000.00-------------1.00------------------------------------
.............AGGAGCTGAGACGGCTAGA.......................................................................................................................................................................................................................... 191.000.00---------1.00----------------------------------------
.....................................................................CCCACTCTCAGGACCCGAG.................................................................................................................................................................. 191.000.00---------------------------------1.00----------------
....................................................................................................CTTCCCCCTCAAAAAGTCC................................................................................................................................... 191.000.00------1.00-------------------------------------------
.............AGGAGCTGAGACGGCTTTG.......................................................................................................................................................................................................................... 191.000.00---------1.00----------------------------------------
................................................................................................................................................................GCCCCACAGGCCAAAATTA....................................................................... 191.000.00----------------------------------------------1.00---
......................................................................................CGACTTCCATCCTGCG.................................................................................................................................................... 161.000.00------------------------------------------1.00-------
.................................................................................................................................................CCACAGACCCAACCAGCCTGGT................................................................................... 221.000.00----1.00---------------------------------------------
..................................................................................................TGCTTCCCCCTCAAAATT...................................................................................................................................... 181.000.00------------------------------------------------1.00-
................................................................................................................................................TTGGCCTGTGGGGCTGGTTGGGTCTGTGGG............................................................................ 3011.001.00--------------------------1.00-----------------------
.....................................GCCCTACCTGACCAGGTGAC................................................................................................................................................................................................. 2011.001.00-----------------------1.00--------------------------