ID: uc010eeo.1_intron_6_0_chr19_36504491_r.5p
GENE: ALKBH6(1)
chr19:36504877-36505126-


(2)
AGO2.ip 		(16)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(28)
CELL-LINE 		(12)
CERVIX 		(5)
HEART 		(4)
HELA 		(6)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(25)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AGGGGGATGGGGATGTTGAATTTGGAAATTGGAGGGGACGCTGGTGGACGGTCAGTTTTGGGGAGTGCTGGGGGTAGAGATGGATGTCAATAGGGCTGAAAGTGGGGATCCGGGGGAGCCCAGAGTAGGAGTCCGAGGAGGCTCAGAGCTTGGAGTCCTAAAAGGCTCGGAGTCGGGGATCTGAATGGTTCAGGGAGGGAAGAAGATTTGGGAGTCAGCCTCAGAGCTAAAGATCTCAGGGTGCTGGAGT
.................................................................((((..((((.....(((((.((................)).))))).....))))..)))).(((((......)))))..........................................................................................................
..............................................................63...................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191502(GSM715612)
9genomic small RNA (size selected RNA from to. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)
........................................................................................................................................................................................................................................ATCTCAGGGTGCTGGAG.1717.007.00----7.00---------------------------------------------------------------------------------------------------------------
.................................GGGGACGCTGGTGGACGG.......................................................................................................................................................................................................1816.006.00------------3.00-----3.00-------------------------------------------------------------------------------------------------
....................TTTGGAAATTGGAGGGGACG..................................................................................................................................................................................................................2016.006.00----------3.00--------1.00-----------------------1.00--------------------------------------------------------1.00---------------
...................................................................CTGGGGGTAGAGATGGATG....................................................................................................................................................................1916.006.00-4.00-----------1.001.00-----------------------------------------------------------------------------------------------------
..................................GGGACGCTGGTGGACGGT......................................................................................................................................................................................................1816.006.00-----3.00----------------------------------------------------------1.00---------1.00----1.00------------------------------------
.....................TTGGAAATTGGAGGGGACGCT................................................................................................................................................................................................................2115.005.00-1.00---------------------------------1.00-----------------------------------------1.00------------1.00----------1.00--------------
..................................................................GCTGGGGGTAGAGATGGATG....................................................................................................................................................................2015.005.00-3.00------------1.00------------------------------------------------------------1.00----------------------------------------
...................ATTTGGAAATTGGAGGGGA....................................................................................................................................................................................................................1915.005.00-1.00---4.00--------------------------------------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGAC.........................................................................................................................................................................................................1814.004.00----------------1.00-------------------1.00--------------------------------1.00------------------1.00---------------------------
....................TTTGGAAATTGGAGGGGA....................................................................................................................................................................................................................1814.004.00-1.00-1.00------------1.00----1.00----------------------------------------------------------------------------------------------
................................................................GTGCTGGGGGTAGAGATGGA......................................................................................................................................................................2014.004.00------4.00-------------------------------------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACGGT......................................................................................................................................................................................................2114.004.00---1.00----------------------1.001.00---------------------------------------------------------------------1.00------------------
...............................................................................................................................................................................................AGGGAGGGAAGAAGATTTGG.......................................2013.003.00-------3.00------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGTAA..........................................................................................................183.000.00--------------1.00-----------------------------------------------------------------------------------------1.00---1.00-------
......................................................................................TCAATAGGGCTGAAAGTGG.................................................................................................................................................1913.003.00-3.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGGCTCGGAGTCGGGGATCTGAATGG..............................................................2612.002.00---2.00----------------------------------------------------------------------------------------------------------------
......................TGGAAATTGGAGGGGACG..................................................................................................................................................................................................................1812.002.00-----------------------------------------------------------------------------------------------1.00---------1.00----------
................................AGGGGACGCTGGTGGACG........................................................................................................................................................................................................1812.002.00---------------------------------1.00-------------------1.00--------------------------------------------------------------
............................TTGGAGGGGACGCTGGTGGAC.........................................................................................................................................................................................................2112.002.00------------------------------------------------------------------------1.00-----------------------1.00-------------------
.................................GGGGACGCTGGTGGACGGT......................................................................................................................................................................................................1912.002.00-------1.00-----------------1.00------------------------------------------------------------------------------------------
...............................................ACGGTCAGTTTTGGGGA..........................................................................................................................................................................................1712.002.00----------------------------------------------------1.00-----------------------------1.00---------------------------------
........................GAAATTGGAGGGGACGCT................................................................................................................................................................................................................1812.002.00-2.00------------------------------------------------------------------------------------------------------------------
..............................................................................GATGGATGTCAATAGGGC..........................................................................................................................................................1812.002.00---2.00----------------------------------------------------------------------------------------------------------------
.....................TTGGAAATTGGAGGGGACGCTGGTGGACGGTCAG...................................................................................................................................................................................................3412.002.00---------2.00----------------------------------------------------------------------------------------------------------
...........................ATTGGAGGGGACGCTGGTGG...........................................................................................................................................................................................................2012.002.00-2.00------------------------------------------------------------------------------------------------------------------
................................................................GTGCTGGGGGTAGAGATGGATG....................................................................................................................................................................2212.002.00--------------------------------------------------1.00-------------------------1.00---------------------------------------
....................................................................TGGGGGTAGAGATGGATG....................................................................................................................................................................1812.002.00-------------------1.00---------1.00--------------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACGG.......................................................................................................................................................................................................2012.002.00-------------------1.00-------------1.00----------------------------------------------------------------------------------
............................TTGGAGGGGACGCTGGTGGA..........................................................................................................................................................................................................2012.002.00-2.00------------------------------------------------------------------------------------------------------------------
..............................GGAGGGGACGCTGGTGGACGG.......................................................................................................................................................................................................2112.002.00-----------------2.00--------------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGACGGT......................................................................................................................................................................................................2012.002.00---1.00---------1.00------------------------------------------------------------------------------------------------------
.....................................................................................GTCAATAGGGCTGAAAGTGG.................................................................................................................................................2012.002.00-2.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGGAAGAAGATTTGGGAG....................................1912.002.00-----------2.00--------------------------------------------------------------------------------------------------------
...............................................ACGGTCAGTTTTGGGGAG.........................................................................................................................................................................................1812.002.00------------------------------------------2.00-------------------------------------------------------------------------
.....................TTGGAAATTGGAGGGGA....................................................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................CTGAATGGTTCAGGGAGGGAAGAAG.............................................2511.001.00---------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................AGAAGATTTGGGAGTCAGCCTCAGAGCC......................281.000.00--------1.00-----------------------------------------------------------------------------------------------------------
................TGAATTTGGAAATTGGAGGG......................................................................................................................................................................................................................2011.001.00--------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................GAGTCGGGGATCTGAATGGTT............................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00------------
......................TGGAAATTGGAGGGGACGCTGGTGGACG........................................................................................................................................................................................................2811.001.00-------------------------------------1.00------------------------------------------------------------------------------
...................ATTTGGAAATTGGAGGGGACG..................................................................................................................................................................................................................2111.001.00--------------------1.00-----------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGATTG.......................................................................................................................................................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGGGAGTCAGCCTCACAG........................181.000.00--------1.00-----------------------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGACGGCCAG...................................................................................................................................................................................................231.000.00--------1.00-----------------------------------------------------------------------------------------------------------
.....GATGGGGATGTTGAATTTGGAA...............................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGAGGTA...........................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------------------------
..........................AATTGGAGGGGACGCTGGTGG...........................................................................................................................................................................................................2111.001.00----------------------------------------1.00---------------------------------------------------------------------------
.........................AAATTGGAGGGGACGCTGG..............................................................................................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------
............................................TGGACGGTCAGTTTTGGGGAGTCCT.....................................................................................................................................................................................251.000.00---------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................GAGCCCAGAGTAGGAGTCCGAGGAGG.............................................................................................................2611.001.00---1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGGGATCTGAATGGTTCAGGG.......................................................2211.001.00-----------------------------------------------1.00--------------------------------------------------------------------
.....................TTGGAAATTGGAGGGGACGCTGGTGGACGGTT.....................................................................................................................................................................................................321.000.00---------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................TAGGAGTCCGAGGAGGTTAG.........................................................................................................2021.000.50--1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................CAATAGGGCTGAAAGTGGGGATCCGG.........................................................................................................................................2611.001.00---------------------------------------------1.00----------------------------------------------------------------------
..............................GGAGGGGACGCTGGTGGA..........................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00------------------------------------------------------------------
............................TTGGAGGGGACGCTGGCGGA..........................................................................................................................................................................................................201.000.00-1.00------------------------------------------------------------------------------------------------------------------
.....................................................................GGGGGTAGAGATGGATGT...................................................................................................................................................................1821.001.00----------0.50---------0.50-----------------------------------------------------------------------------------------------
.......................GGAAATTGGAGGGGACGCTG...............................................................................................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------------------------------
.....................................................AGTTTTGGGGAGTGCTGGGGGTAGAGATGGAT.....................................................................................................................................................................3211.001.00------------------------------1.00-------------------------------------------------------------------------------------
......................................................................................................TGGGGATCCGGGGGAGAA..................................................................................................................................181.000.00--------------------------------------------------------------------1.00-----------------------------------------------
............................................TGGACGGTCAGTTTTGG.............................................................................................................................................................................................1711.001.00---------------------1.00----------------------------------------------------------------------------------------------
...............................................................AGTGCTGGGGGTAGAGATGGATG....................................................................................................................................................................2311.001.00-----------------------------------------------------------------------1.00--------------------------------------------
....................TTTGGAAATTGGAGGGGAAA..................................................................................................................................................................................................................2011.004.00-----------1.00--------------------------------------------------------------------------------------------------------
.......................GGAAATTGGAGGGGACGC.................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------1.00------------------------------------------
...................ATTTGGAAATTGGAGGGGACGCT................................................................................................................................................................................................................2311.001.00----------------------------------1.00---------------------------------------------------------------------------------
...................ATTTGGAAATTGGAGGG......................................................................................................................................................................................................................1711.001.00-----------------------------------1.00--------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACG........................................................................................................................................................................................................1911.001.00---------------------------1.00----------------------------------------------------------------------------------------
..................AATTTGGAAATTGGAGGGGAC...................................................................................................................................................................................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------
..............................................................GAGTGCTGGGGGTAGAGA..........................................................................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------------------------------------------
.GGGGGATGGGGATGTTGAA......................................................................................................................................................................................................................................1911.001.00------------------------1.00-------------------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACGGTCAG...................................................................................................................................................................................................2411.001.00-----------------------------------------1.00--------------------------------------------------------------------------
.............................TGGAGGGGACGCTGGTGGACGG.......................................................................................................................................................................................................2211.001.00----------------------------------------1.00---------------------------------------------------------------------------
............................TTGGAGGGGACGCTGGTGGACGGATT....................................................................................................................................................................................................261.000.00--------------------------------------------1.00-----------------------------------------------------------------------
....GGATGGGGATGTTGAATTTGGA................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------------------------1.00----
...........................................................................................................................................................................................................AGATTTGGGAGTCAGCCTCAGAGCTA.....................2611.001.00--------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AAAGATCTCAGGGTGCTGGA..2011.001.00-------------------------------1.00------------------------------------------------------------------------------------
.................................................................TGCTGGGGGTAGAGATGAGGT....................................................................................................................................................................211.000.00-----------------------------------------------------------------------------------------------------------1.00--------
.....GATGGGGATGTTGAATTTGGAAA..............................................................................................................................................................................................................................2311.001.00------------------------------------------------------------------------------------1.00-------------------------------
............................TTGGAGGGGACGCTGGTGGACG........................................................................................................................................................................................................2211.001.00---------------------------------------1.00----------------------------------------------------------------------------
......................TGGAAATTGGAGGGGACGCT................................................................................................................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGTTAA.........................................................................................................191.000.00-----------------------------------------------------------------------------------1.00--------------------------------
................................AGGGGACGCTGGTGGAGTC.......................................................................................................................................................................................................191.000.00------------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................GTCAATAGGGCTGAAAGTGGG................................................................................................................................................2111.001.00-----------------------------1.00--------------------------------------------------------------------------------------
......................TGGAAATTGGAGGGGACGCTGGTGGACGGCACC...................................................................................................................................................................................................331.000.00-------------------------------------------------------1.00------------------------------------------------------------
............ATGTTGAATTTGGAAATTGGAGG.......................................................................................................................................................................................................................2311.001.00---1.00----------------------------------------------------------------------------------------------------------------
...........................ATTGGAGGGGACGCTGGTGGACGGTC.....................................................................................................................................................................................................2611.001.00-----------------1.00--------------------------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACGGGCAG...................................................................................................................................................................................................2411.002.00--------------------1.00-----------------------------------------------------------------------------------------------
.............TGTTGAATTTGGAAATTGGAGGG......................................................................................................................................................................................................................2311.001.00---------1.00----------------------------------------------------------------------------------------------------------
........GGGGATGTTGAATTTGGAAATTGGAG........................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------------------------1.00--------------------------
................................................................GTGCTGGGGGTAGAGATGGAT.....................................................................................................................................................................2111.001.00----------------------------------1.00---------------------------------------------------------------------------------
...............................GAGGGGACGCTGGTGGACGGTCAGT..................................................................................................................................................................................................2511.001.00--------------------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................................GGGAAGAAGATTTGGGTAT...................................191.000.00------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................CTAAAAGGCTCGGAGTCGGGGATCTGAAT................................................................2911.001.00-------------------------------------------------------------1.00------------------------------------------------------
...........................ATTGGAGGGGACGCTGGTGGA..........................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------1.00---------------------------------------------
..................AATTTGGAAATTGGAGGGGA....................................................................................................................................................................................................................2011.001.00-------------------------------1.00------------------------------------------------------------------------------------
..............................................................................GATGGATGTCAATAGGG...........................................................................................................................................................1711.001.00---------1.00----------------------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGAGGT.......................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------1.00------
............................TTGGAGGGGACGCTGGTGGACGGTCAGTTTT...............................................................................................................................................................................................3111.001.00---------------1.00----------------------------------------------------------------------------------------------------
...................ATTTGGAAATTGGAGGGGACGCTT...............................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------------------------------------------------
...............TTGAATTTGGAAATTGGAGG.......................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------1.00----------------
.................GAATTTGGAAATTGGAGGGGACGCT................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------1.00-----------------------------------------------------
...........................................GTGGACGGTCAGTTTTGG.............................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGTAAA.........................................................................................................191.000.00--------------------------------------------------------------------------------------------------1.00-----------------
...................ATTTGGAAATTGGAGGGGAC...................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------1.00---------
.................................................................................................................................................................................................................................GCTAAAGATCTCAGGGTG.......1811.001.00--------------------------1.00-----------------------------------------------------------------------------------------
..................................GGGACGCTGGTGGACGGTCAGT..................................................................................................................................................................................................2211.001.00-----------------------------------------1.00--------------------------------------------------------------------------
............ATGTTGAATTTGGAAATTGGAGGGGA....................................................................................................................................................................................................................2611.001.00-------------------------1.00------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGACGGGGC....................................................................................................................................................................................................221.000.00----------------------1.00---------------------------------------------------------------------------------------------
............................TTGGAGGGGACGCTGGTGGACGGTCAGTT.................................................................................................................................................................................................2911.001.00-------------------------------------1.00------------------------------------------------------------------------------
............................................................GGGAGTGCTGGGGGTAGAGATGGATGTCAATA..............................................................................................................................................................3211.001.00-------------1.00------------------------------------------------------------------------------------------------------
............................TTGGAGGGGACGCTGGTGG...........................................................................................................................................................................................................1911.001.00--------------------------------1.00-----------------------------------------------------------------------------------
..................AATTTGGAAATTGGAGGG......................................................................................................................................................................................................................1811.001.00--------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................................................TAAAGATCTCAGGGTGCTGG...2011.001.00-1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGAGGCT...........................................................................................................1911.001.00-----------------------1.00--------------------------------------------------------------------------------------------
..................AATTTGGAAATTGGAGG.......................................................................................................................................................................................................................1720.500.50-------------------------------------------0.50------------------------------------------------------------------------
.............................................................................................................................TAGGAGTCCGAGGAGG.............................................................................................................1620.500.50--0.50-----------------------------------------------------------------------------------------------------------------
................................AGGGGACGCTGGTGGAC.........................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------------------------------------------0.50---
..GGGGATGGGGATGTTGA.......................................................................................................................................................................................................................................1730.330.33---------------------0.33----------------------------------------------------------------------------------------------
....................TTTGGAAATTGGAGGGG.....................................................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------------------------------------------0.33--
................................................................GTGCTGGGGGTAGAGA..........................................................................................................................................................................1670.140.14------------------------------------------------------------------------------------------------------------------0.14-
..................AATTTGGAAATTGGAG........................................................................................................................................................................................................................1680.120.12-------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
AGGGGGATGGGGATGTTGAATTTGGAAATTGGAGGGGACGCTGGTGGACGGTCAGTTTTGGGGAGTGCTGGGGGTAGAGATGGATGTCAATAGGGCTGAAAGTGGGGATCCGGGGGAGCCCAGAGTAGGAGTCCGAGGAGGCTCAGAGCTTGGAGTCCTAAAAGGCTCGGAGTCGGGGATCTGAATGGTTCAGGGAGGGAAGAAGATTTGGGAGTCAGCCTCAGAGCTAAAGATCTCAGGGTGCTGGAGT
.................................................................((((..((((.....(((((.((................)).))))).....))))..)))).(((((......)))))..........................................................................................................
..............................................................63...................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		GSM339994(GSM339994)
hues6. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		GSM532884(GSM532884)
G871T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191502(GSM715612)
9genomic small RNA (size selected RNA from to. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)
............................................................................................................................GTAGGAGTCCGAGGAC.............................................................................................................. 1635.000.0022.00-12.00-------------------------------------------1.00---------------------------------------------------------------------
............................................................................................................................TCCTCGGACTCCTAC............................................................................................................... 1518.008.006.00-2.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGACT............................................................................................................. 177.000.004.00-3.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGACTCA........................................................................................................... 196.000.004.00-2.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGAGC............................................................................................................. 175.000.003.00-2.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................CCTCCTCGGACTCCTAC............................................................................................................. 1713.003.002.00-1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAAGA............................................................... 202.000.00------------------------------------------------------------1.00--------------------------1.00----------------------------
...........................................................................................................................................................................................GTTCAGGGAGGGAAGTCTG............................................ 192.000.00------------------------------1.00--------------------------------------------------------------1.00----------------------
............................................................................................................................GTAGGAGTCCGAGGAGGCC........................................................................................................... 192.000.00--------------------------------------2.00-----------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAAG................................................................ 192.000.00----------------------------1.00---------------------------------------------------------------------------------1.00-----
.......................................................................................................................................................................CGGAGTCGGGGATCTGAGA................................................................ 192.000.00----2.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGGA................................................................. 182.000.00--------------------------------------------------------------------------------------1.00----1.00------------------------
............................................................................................................................GTAGGAGTCCGAGGAGCTCA.......................................................................................................... 202.000.001.00-1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................GGAGTCCGAGGAGGCTCTA........................................................................................................ 191.000.00----------------------------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAAGAGT............................................................. 221.000.00----------------------------------------------------------------------------------------------1.00---------------------
........................................................................................................................TCCTCGGACTCCTACTCTG............................................................................................................... 1911.001.00------------------------------------------------------------------------------------------------------1.00-------------
............................................................................................................................GTAGGAGTCCGAGGACTC............................................................................................................ 181.000.001.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAAGAG.............................................................. 211.000.00-------------------------------------------------------------------------------------1.00------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAGT................................................................ 191.000.00----------------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGGAGT............................................................... 201.000.00-----------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................TTCAGATCCCCGACTC................................................................. 1611.001.00----------------------1.00---------------------------------------------------------------------------------------------
............................................................................................................................GTAGGAGTCCGAGGAGGCTC.......................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGCCA................................................................ 191.000.00------------------------------------------------------------------1.00-------------------------------------------------
...........................................................................................................ATCCGGGGGAGCCCATTTC............................................................................................................................ 191.000.00----------------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGGCA.......................................................................................................... 181.000.00---------------------------------------------------1.00----------------------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAGAGT.............................................................. 211.000.00-----------------------------------------------------------------1.00--------------------------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTCTGT................................................................ 191.000.00---------------------------------------------------------1.00----------------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGCTGCC........................................................................................................ 201.000.00------------------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................................AGGAGTCCGAGGAGGCGCC......................................................................................................... 191.000.00--------------------------------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................CGGAGTCGGGGATCTGAG................................................................. 181.000.00------------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................CTCCTCGGACTCCTA.............................................................................................................. 1530.330.330.33-------------------------------------------------------------------------------------------------------------------