ID: uc010dsi.2_intron_8_0_chr19_1366381_f.3p
GENE: MUM1(9)
chr19:1366959-1367208+


(1)
AGO2.ip
(2)
B-CELL
(5)
BRAIN
(3)
BREAST
(14)
CELL-LINE
(1)
FIBROBLAST
(5)
LIVER
(2)
OTHER
(3)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CAGTGTTGCTGAAGTCACTGGACCCACCATGGTGCATTGGGAGCTTCTTGGCAGCTGGGGAAACGGTCACCTTCCATAAATAAGCTGGGGCTGGTGGGGCCTCCAGCGGCCTCCACTGATCTTAATCAGAGACAGGGAAAGGTTTTTAGCTTATTAGAGGAAGTTCATTCATGTTAACTTTTCCCTCTCTCTGCTTCAAGTTTCACAGTGTCTCTTAAAAGTTTAAAGCACTTTGATTGTAAAGAGAAAC
.....................................................((((......)))).(((((((...........(((((((.(((.....))).)))))))..(((((....)))))......)))).)))...........................................................................................................
..................................................51...............................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................................................................................................TAATCAGAGACAGGGAAAGGTT..........................................................................................................22111.0011.00-2.00---1.002.00-------1.00----1.00------1.001.00----1.00---1.00--
...........................................................................................................................AATCAGAGACAGGGAAAGGTTTT........................................................................................................2316.006.006.00--------------------------------------
...........................................................................................................................AATCAGAGACAGGGAAAGGTTA.........................................................................................................2213.002.00-----1.00----1.00--------------1.00-------------
.........................................................................................................................................................................................................TTCACAGTGTCTCTTAAAAGTTTAAAG......................2713.003.00--3.00------------------------------------
.........................................................................................................................TTAATCAGAGACAGGGAAAGGTTT.........................................................................................................2413.003.00---3.00-----------------------------------
..........................................................................................................................TAATCAGAGACAGGGAAAGGTA..........................................................................................................222.000.00-----------------1.00--1.00------------------
.........................................................................................................................................................................................TCTCTCTGCTTCAAGTTTCACAGTG........................................2512.002.00-------2.00-------------------------------
...........................................................................................................................AATCAGAGACAGGGAAAGGT...........................................................................................................2012.002.00-2.00-------------------------------------
...............................................................................................GGGGCCTCCAGCGGCCCCG........................................................................................................................................192.000.00-----------2.00---------------------------
.........................................................................................................................TTAATCAGAGACAGGGAAAGGT...........................................................................................................2212.002.00---------------1.00-------------------1.00---
...........................................................................................................................AATCAGAGACAGGGAAAGGTT..........................................................................................................2112.002.00-------------1.00----------1.00--------------
............................................................................TAAATAAGCTGGGGCCCA............................................................................................................................................................182.000.00---------2.00-----------------------------
..........................................................................................................................TAATCAGAGACAGGGAAAGG............................................................................................................2011.001.00---------------------------------1.00-----
.......................................................................................................................TCTTAATCAGAGACAGGGAAAGG............................................................................................................2311.001.00--1.00------------------------------------
.............................................................................................................................TCAGAGACAGGGAAAGGTTTTT.......................................................................................................2211.001.00-------------------------------1.00-------
................................................................................................................................................................................ACTTTTCCCTCTCTCTGC........................................................1811.001.00-----------------------------1.00---------
..........................................................................................................................TAATCAGAGACAGGGAAAGGTAA.........................................................................................................231.000.00--------1.00------------------------------
...........................................................................................................................AATCAGAGACAGGGAAAGGTTT.........................................................................................................2211.001.00----------1.00----------------------------
....................................................................................................................................................................................TTCCCTCTCTCTGCTGCC....................................................181.000.00----1.00----------------------------------
................................................TGGCAGCTGGGGAAACGGTCACCT..................................................................................................................................................................................2411.001.00----------------------------------1.00----
....................................................................................................................................................................................TTCCCTCTCTCTGCTGCCA...................................................191.000.00----1.00----------------------------------
............................................................................................................................ATCAGAGACAGGGAAAGGTTT.........................................................................................................2111.001.00-1.00-------------------------------------
......................................................................................................................................................................................................................................CTTTGATTGTAAAGAGAAA.1911.001.00------------------------------1.00--------
..........................................................................................................................................................................................................................AAGTTTAAAGCACTTTGATTGTAAAG......2611.001.00------------1.00--------------------------
...........................................................................................................................AATCAGAGACAGGGAAAGGGT..........................................................................................................211.000.00-----------------------1.00---------------
............................................................................................................................ATCAGAGACAGGGAAAGGTTTTT.......................................................................................................2311.001.00-------------------------------------1.00-
....................................................................................................................................................................................................................................CACTTTGATTGTAAAGAGA...1911.001.00----------------------------1.00----------
...........................................................................................................................AATCAGAGACAGGGAAAGGTAA.........................................................................................................2211.002.00--------1.00------------------------------
...................................................CAGCTGGGGAAACGGCCT.....................................................................................................................................................................................181.000.00--------------------------------------1.00
................................................................................................GGGCCTCCAGCGGCCCG.........................................................................................................................................171.000.00------------------1.00--------------------
...............................................................................ATAAGCTGGGGCTGGGGC.........................................................................................................................................................181.000.00----------------------1.00----------------
.............................................TCTTGGCAGCTGGGGAAA...........................................................................................................................................................................................1830.330.33--0.33------------------------------------

Antisense strand
CAGTGTTGCTGAAGTCACTGGACCCACCATGGTGCATTGGGAGCTTCTTGGCAGCTGGGGAAACGGTCACCTTCCATAAATAAGCTGGGGCTGGTGGGGCCTCCAGCGGCCTCCACTGATCTTAATCAGAGACAGGGAAAGGTTTTTAGCTTATTAGAGGAAGTTCATTCATGTTAACTTTTCCCTCTCTCTGCTTCAAGTTTCACAGTGTCTCTTAAAAGTTTAAAGCACTTTGATTGTAAAGAGAAAC
.....................................................((((......)))).(((((((...........(((((((.(((.....))).)))))))..(((((....)))))......)))).)))...........................................................................................................
..................................................51...............................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................TCCAGCGGCCTCCACTTC................................................................................................................................... 181.000.00---------------------1.00-----------------
...................................................................................................................................................................................TTTCCCTCTCTCTGCTTGCC................................................... 201.000.00----------------1.00----------------------