ID: uc010dmr.2_intron_0_0_chr18_32821074_f.5p
GENE: (1)
chr18:32821024-32821273+


(1)
AGO2.ip 		(9)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(27)
CELL-LINE 		(9)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(3)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TTGCAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCCTGGGCTTCGCGGTGAGGGACGTGGGCCCCTAGGAAGAGGGAGGTGGGGTTGGGAGCGCGCGCCGGACAGTGGAGGAGCTCCGCTCCTCGGCCTGCCCATCCCCAGGTCGCGGCCCTTTGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTTTCCAAAGGAAAACGCAGTTCCGCTGACCC
.........................................................................................................................................(((((((..(((((((....)))).)))..((........))..))))))).(((....)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040011(GSM532896)
G529T. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040027(GSM532912)
G220T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
.......................................................................................................................................................................................GGGGAACTCAGAGGAGGC.................................................1819.009.006.00----------3.00------------------------------------------------------------------------------------------
.............................................................................................................................................CAGGTCGCGGCCCTTTGGC..........................................................................................1918.008.008.00-----------------------------------------------------------------------------------------------------
............................................TTCGCGGTGAGGGACGTG............................................................................................................................................................................................1816.006.00----------------1.00-------1.00------------------------1.00----1.00-----1.00-----------------------------1.00-----------
.......................................................................................................................................................................................GGGGAACTCAGAGGAGGCCAG..............................................2115.005.001.00--3.00----1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................ACTGGGGAACTCAGAGGAGGC.................................................2114.004.00-------------------------------1.00-----------------------1.00-----1.00-------------------1.00--------------------
..........................................GCTTCGCGGTGAGGGACGTGGGC.........................................................................................................................................................................................2314.004.00-4.00----------------------------------------------------------------------------------------------------
.....................................................................................................CGGACAGTGGAGGAGCCC...................................................................................................................................1814.002.00-1.00----1.00-------------------------------------------1.00------------------------------------------1.00--------
...................................................................................................GCCGGACAGTGGAGGAG......................................................................................................................................1713.003.00-1.00----------------1.00-----------------1.00-----------------------------------------------------------------
........................................GGGCTTCGCGGTGAGGGA................................................................................................................................................................................................1813.003.00--2.00------------1.00--------------------------------------------------------------------------------------
...CAGCTCGGGGTGGGTGGCT....................................................................................................................................................................................................................................1913.003.00--2.00----------------------------1.00----------------------------------------------------------------------
...................................................................................................GCCGGACAGTGGAGGAGCC....................................................................................................................................1913.001.00-1.00--1.00-----------------------------------------------------------------------------------1.00-------------
........................................................................................................................................................................................GGGAACTCAGAGGAGGCCAG..............................................2013.003.00---2.00-----------------------1.00--------------------------------------------------------------------------
.....................................................................................................CGGACAGTGGAGGAGCCCCG.................................................................................................................................2013.002.00-----1.00---------------------------1.00------------------------------------------------1.00-------------------
...............................................................................................................................................................................AAGCGACTGGGGAACTCAGAGGAGGCC................................................2713.003.00--------------3.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTGGGGAACTCAGAGGAGGC.................................................2013.003.001.00------------------2.00----------------------------------------------------------------------------------
...............................................................................................................................................................................AAGCGACTGGGGAACTCA.........................................................1813.003.00-----2.00--------------1.00---------------------------------------------------------------------------------
..GCAGCTCGGGGTGGGTGGCT....................................................................................................................................................................................................................................2012.002.00---------------2.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGGAAAACGCAGTTCCGCTGA...2112.002.00-2.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GGGGAACTCAGAGGAGGCCAGC.............................................2212.002.00-2.00----------------------------------------------------------------------------------------------------
......................................CTGGGCTTCGCGGTGAGGGA................................................................................................................................................................................................2012.002.00----1.00-----1.00-------------------------------------------------------------------------------------------
..........................................GCTTCGCGGTGAGGGACGTG............................................................................................................................................................................................2012.002.00--1.00-------------1.00-------------------------------------------------------------------------------------
.........................TTCCTGGCCGCTCCTGGGCTTCGT.........................................................................................................................................................................................................242.000.00-----------------2.00------------------------------------------------------------------------------------
.......................................TGGGCTTCGCGGTGAGGGACG..............................................................................................................................................................................................2112.002.00-------------1.00----------------------------------------------------1.00-----------------------------------
........................TTTCCTGGCCGCTCCTGGGCTTCGC.........................................................................................................................................................................................................2512.002.00--------------------------2.00---------------------------------------------------------------------------
...............................................................................................................................................................................AAGCGACTGGGGAACTCAGAGGAGGCCAGC.............................................3012.002.00-1.00-----1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTGGGGAACTCAGAGGAGGCCAG..............................................2312.002.00-----------------------------1.00--------------------------------------------------1.00---------------------
...................................................................................................GCCGGACAGTGGAGGAGCCCC..................................................................................................................................2112.001.00----1.00-------1.00-----------------------------------------------------------------------------------------
.....................................................................................................CGGACAGTGGAGGAGC.....................................................................................................................................1612.002.00---------------------------------1.00---------------------------------------------------1.00----------------
..............................................................................................................................................................................CAAGCGACTGGGGAACTCA.........................................................1912.002.00-2.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................AGCGACTGGGGAACTCA.........................................................1712.002.002.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GGGGAACTCAGAGGAGGCCAGCA............................................2312.002.00-------------2.00----------------------------------------------------------------------------------------
...........................................................................AGGGAGGTGGGGTTGGAAAA...........................................................................................................................................................202.000.00---------2.00--------------------------------------------------------------------------------------------
..................................................GTGAGGGACGTGGGCCC.......................................................................................................................................................................................1731.671.671.67-----------------------------------------------------------------------------------------------------
...........................................................................AGGGAGGTGGGGTTGGGA.............................................................................................................................................................1831.331.33-----------------0.33------------------------------------------------------------------1.00-----------------
................................................................................................................................................................................AGCGACTGGGGAACTCAGAGGAGGCCAGCACC..........................................321.000.00-------1.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................AAGCGACTGGGGAACTCAGAGGAGGCCA...............................................2811.001.00-------------------------------------------------------------------1.00----------------------------------
...........................CCTGGCCGCTCCTGGCAGC............................................................................................................................................................................................................191.000.00---------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................CGGCGTCTCCAAGCGACTGGGGAACTCAGAGGTG...................................................341.000.00--------------------------------------1.00---------------------------------------------------------------
..................................GCTCCTGGGCTTCGCGG.......................................................................................................................................................................................................1711.001.00-------------------------------------1.00----------------------------------------------------------------
........CGGGGTGGGTGGCTCATTTCCT............................................................................................................................................................................................................................2211.001.00----------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................................................CAAGCGACTGGGGAACT...........................................................1711.001.00-1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................CCGCGCGGCGTCTCCGCC........................................................................181.000.00---------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................ACTGGGGAACTCAGAGGAGGCCAGC.............................................2511.001.00---------------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................GGGAACTCAGAGGAGACT................................................181.000.00-------------------------------------------------------------------------------------------1.00----------
....................................................GAGGGACGTGGGCCCCTAGGAAGAGG............................................................................................................................................................................2611.001.00------------------------------------------------------------------------1.00-----------------------------
....................................................................................................CCGGACAGTGGAGGAGCCC...................................................................................................................................191.000.00-----------------------------------------------------------------1.00------------------------------------
..................................................................................................................................................CGCGGCCCTTTGGCCCGCGCGG..................................................................................2211.001.00--------------------------------------------1.00---------------------------------------------------------
..............................................................................................................................................................................CAAGCGACTGGGGAACTCAGAGGAGGCCATA.............................................311.000.00--------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................................................................GCGACTGGGGAACTCAGAGGAGGCC................................................2511.001.00-------------------------------------------------------------------------------1.00----------------------
...................................CTCCTGGGCTTCGCGGTGAG...................................................................................................................................................................................................2011.001.00----------------------------------------------------1.00-------------------------------------------------
....................CTCATTTCCTGGCCGCTCCTG.................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------1.00-----------------------
..........................................................................GAGGGAGGTGGGGTTGAT..............................................................................................................................................................181.000.00-----------------------------------------------1.00------------------------------------------------------
..........................TCCTGGCCGCTCCTGGGCTTCGCGGTGAGGGA................................................................................................................................................................................................3211.001.00-----------------------------------------------------------------------------------1.00------------------
..........................................................................................................................................................TTTGGCCCGCGCGGCGTCTCCAAGC.......................................................................2511.001.00--------------------------------------------------------------------------1.00---------------------------
....................................................GAGGGACGTGGGCCCCTAGGAAGAGGGAG.........................................................................................................................................................................2911.001.00----------------------------------------1.00-------------------------------------------------------------
....................CTCATTTCCTGGCCGCTCGGA.................................................................................................................................................................................................................211.000.00----------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................AGGCCAGCACTCAAACTCCTG................................2111.001.00-1.00----------------------------------------------------------------------------------------------------
.........................................................................AGAGGGAGGTGGGGTCGC...............................................................................................................................................................181.000.00---------------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................CGACTGGGGAACTCAGAGGA....................................................2011.001.00-----------------------------------------------------------------------------------------1.00------------
............................................TTCGCGGTGAGGGACGTGG...........................................................................................................................................................................................1911.001.00----------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................CAGGTCGCGGCCCTTTTGC..........................................................................................191.000.001.00-----------------------------------------------------------------------------------------------------
...............................................GCGGTGAGGGACGTGGTAGG.......................................................................................................................................................................................201.000.00-------------------------1.00----------------------------------------------------------------------------
......................CATTTCCTGGCCGCTCCTG.................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------1.00-------------------------------
.................................................................................................................................................................................GCGACTGGGGAACTCAGAGGAGCC.................................................241.000.00-----------------------------------------------------------------------------1.00------------------------
.....................................................AGGGACGTGGGCCCCTAGGAAGAGG............................................................................................................................................................................2511.001.00--1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GGGAACTCAGAGGAGGCCAGCACTC.........................................2511.001.00-----------------------------------------------------------------------1.00------------------------------
.................................................................CCCTAGGAAGAGGGAGGTGG.....................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------1.00---------
........................................................................................TGGGAGCGCGCGCCGCGTG...............................................................................................................................................191.000.00------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................................................CTGGGGAACTCAGAGGAGGCC................................................2111.001.00--------1.00---------------------------------------------------------------------------------------------
...........................................CTTCGCGGTGAGGGACGTGG...........................................................................................................................................................................................2011.001.00--------------------------------1.00---------------------------------------------------------------------
..................................................................................TGGGGTTGGGAGCGCGCGCCGG..................................................................................................................................................2211.001.00----------------------------1.00-------------------------------------------------------------------------
..............................................................................GAGGTGGGGTTGGGAGCGC.........................................................................................................................................................1911.001.00--------------------------------------------------------1.00---------------------------------------------
..............................................................................................................................................................................CAAGCGACTGGGGAACTCAGAGGAGGCCAG..............................................3011.001.00--------------------1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................GGGGAACTCAGAGGAGGCC................................................1911.001.00--------1.00---------------------------------------------------------------------------------------------
......................................................................................................................................................................................TGGGGAACTCAGAGGAGG..................................................1811.001.00---------------------------------------------------------------------1.00--------------------------------
........................TTTCCTGGCCGCTCCTGG................................................................................................................................................................................................................1811.001.00-----------------------------------------1.00------------------------------------------------------------
............................................................TGGGCCCCTAGGAAGATG............................................................................................................................................................................181.000.00----------------------------1.00-------------------------------------------------------------------------
...........................................CTTCGCGGTGAGGGACGTGGG..........................................................................................................................................................................................2111.001.00--1.00---------------------------------------------------------------------------------------------------
..........GGGTGGGTGGCTCATTTCCTGGCCG.......................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------1.00---------------------------------------
......................................................GGGACGTGGGCCCCTAGGAAGAGGGAGG........................................................................................................................................................................2811.001.00-----------------------------------1.00------------------------------------------------------------------
.......................................TGGGCTTCGCGGTGAGGGA................................................................................................................................................................................................1911.001.00------1.00-----------------------------------------------------------------------------------------------
...........................................................................AGGGAGGTGGGGTTGGAACA...........................................................................................................................................................201.000.00---------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................GCCCGCGCGGCGTCTCCAAGCGACTGGGG...............................................................2911.001.00-----1.00------------------------------------------------------------------------------------------------
...............................GCCGCTCCTGGGCTTCGCGGTGAGGGACG..............................................................................................................................................................................................2911.001.00----1.00-------------------------------------------------------------------------------------------------
.............................................................GGGCCCCTAGGAAGAGGG...........................................................................................................................................................................1811.001.00--------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................................TGGCCCGCGCGGCGTCTCCAAGCGACTGGGG...............................................................3111.001.00-------1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTGGGGAACTCAGAGGAGGCCCG..............................................2311.001.00-----------------------------1.00------------------------------------------------------------------------
...CAGCTCGGGGTGGGTGGC.....................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00------------------------------------------------
.......................ATTTCCTGGCCGCTCCTGGGCTT............................................................................................................................................................................................................2311.001.00------------------------------1.00-----------------------------------------------------------------------
..............................................CGCGGTGAGGGACGTGGGCCCCTAGGAAG...............................................................................................................................................................................2911.001.00---------------------------------------------------------------------------------------1.00--------------
...................GCTCATTTCCTGGCCGCTC....................................................................................................................................................................................................................1911.001.00----------------------------------1.00-------------------------------------------------------------------
.................................................GGTGAGGGACGTGGGCCCCTAGGAAG...............................................................................................................................................................................2611.001.00------------1.00-----------------------------------------------------------------------------------------
............................................................TGGGCCCCTAGGAAGAGG............................................................................................................................................................................1811.001.00---1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CTCCAAGCGACTGGGGAACTCAGAGGAG...................................................2811.001.00---------------------------------------1.00--------------------------------------------------------------
.........................................................................AGAGGGAGGTGGGGTTGGG..............................................................................................................................................................1911.001.00---------------------------------------------------1.00--------------------------------------------------
......................................................................................................................................................................................TGGGGAACTCAGAGGAGGC.................................................1911.001.00-1.00----------------------------------------------------------------------------------------------------
...................................................................................................GCCGGACAGTGGAGGAGC.....................................................................................................................................1811.001.00------------------------1.00-----------------------------------------------------------------------------
..............................................................................GAGGTGGGGTTGGGAGGCTT........................................................................................................................................................201.000.00----------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................CTGCCCATCCCCAGGTCGC.....................................................................................................1911.001.00----------------------------------------------------------------1.00-------------------------------------
............................................TTCGCGGTGAGGGACGTGGG..........................................................................................................................................................................................2011.001.00-1.00----------------------------------------------------------------------------------------------------
........................................GGGCTTCGCGGTGAGGGACG..............................................................................................................................................................................................2011.001.00-----------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................AGCGACTGGGGAACTCAGAGGAGGC.................................................2511.001.00--------------------------------------------------------------------1.00---------------------------------
...........................................CTTCGCGGTGAGGGACGT.............................................................................................................................................................................................1811.001.00---------------------------------------------------------1.00--------------------------------------------
......................................CTGGGCTTCGCGGTGAGGGACG..............................................................................................................................................................................................2211.001.00-------------------------------------------1.00----------------------------------------------------------
.............................................................................................................................................................................CCAAGCGACTGGGGAACTCAGAGGAG...................................................2611.001.00-----1.00------------------------------------------------------------------------------------------------
.................................................................CCCTAGGAAGAGGGAGGTGGGGTTGG...............................................................................................................................................................2611.001.00------------1.00-----------------------------------------------------------------------------------------
......................................CTGGGCTTCGCGGTGAGG..................................................................................................................................................................................................1811.001.00-----------------------1.00------------------------------------------------------------------------------
...................................................................................................GCCGGACAGTGGAGGAGCCC...................................................................................................................................2011.001.00----------1.00-------------------------------------------------------------------------------------------
..........................................................................GAGGGAGGTGGGGTTGGGAA............................................................................................................................................................2021.000.50----------------------------------------------------------------------------1.00-------------------------
.......................................................................GAAGAGGGAGGTGGGGTTGG...............................................................................................................................................................2011.001.00--1.00---------------------------------------------------------------------------------------------------
..GCAGCTCGGGGTGGGTGGCTCATT................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------------1.00------------------------------------------
...............................GCCGCTCCTGGGCTTCGC.........................................................................................................................................................................................................1811.001.00------1.00-----------------------------------------------------------------------------------------------
...........................................................................................GAGCGCGCGCCGGACGACC............................................................................................................................................191.000.00-------------------------1.00----------------------------------------------------------------------------
.....................................................................................................CGGACAGTGGAGGAGCCG...................................................................................................................................1811.002.00-------------------------------------------------------------------------1.00----------------------------
...CAGCTCGGGGTGGGTGGCTC...................................................................................................................................................................................................................................2011.001.00----------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................AGCGACTGGGGAACTCAGAGGAGGCCAG..............................................2811.001.00-------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................CAAGCGACTGGGGAACTC..........................................................1811.001.00------------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................TCCAAGCGACTGGGGAACTC..........................................................2011.001.00-1.00----------------------------------------------------------------------------------------------------
..GCAGCTCGGGGTGGGTG.......................................................................................................................................................................................................................................1730.670.67-----------------------------------------------------------------------------------------------0.33-0.33----
...........................................................................AGGGAGGTGGGGTTGGGAA............................................................................................................................................................1930.671.33----------------0.67-------------------------------------------------------------------------------------
..................................................................CCTAGGAAGAGGGAGGTG......................................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------0.50-------
.....................................................................................................CGGACAGTGGAGGAG......................................................................................................................................1560.500.50-------------------------------------0.17--------------------------------------------------------------0.170.17
..........................................................................GAGGGAGGTGGGGTTGGGA.............................................................................................................................................................1920.500.50-0.50----------------------------------------------------------------------------------------------------
..GCAGCTCGGGGTGGGTGG......................................................................................................................................................................................................................................1830.330.33--------------------------------------------------------------------------------------------------0.33---
...................................................................CTAGGAAGAGGGAGGTG......................................................................................................................................................................1730.330.33------------------------------------------------------------------------------------------------0.33-----
................................................................CCCCTAGGAAGAGGGAGG........................................................................................................................................................................1830.330.330.33-----------------------------------------------------------------------------------------------------
.................TGGCTCATTTCCTGGC.........................................................................................................................................................................................................................1640.250.25------------------------------------0.25-----------------------------------------------------------------

Antisense strand
TTGCAGCTCGGGGTGGGTGGCTCATTTCCTGGCCGCTCCTGGGCTTCGCGGTGAGGGACGTGGGCCCCTAGGAAGAGGGAGGTGGGGTTGGGAGCGCGCGCCGGACAGTGGAGGAGCTCCGCTCCTCGGCCTGCCCATCCCCAGGTCGCGGCCCTTTGGCCCGCGCGGCGTCTCCAAGCGACTGGGGAACTCAGAGGAGGCCAGCACTCAAACTCCTGCTTTCCAAAGGAAAACGCAGTTCCGCTGACCC
.........................................................................................................................................(((((((..(((((((....)))).)))..((........))..))))))).(((....)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040011(GSM532896)
G529T. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040027(GSM532912)
G220T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
..............................................................................................................................................................................................................CTTTGGAAAGCAGGAGTTTGAG...................... 2212.002.00---------------------------1.00-------1.00------------------------------------------------------------------
..........................................................CGTGGGCCCCTAGGAAGC.............................................................................................................................................................................. 181.000.00----------------------------------------------------------1.00-------------------------------------------
...........................................................................................GAGCGCGCGCCGGACG............................................................................................................................................... 161.000.00------------------------------------------------1.00-----------------------------------------------------
........................TTTCCTGGCCGCTCCAAGC............................................................................................................................................................................................................... 191.000.00-1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TGGCCTCCTCTGAGTTCCCC............................................... 2011.001.00----1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TCCTTTGGAAAGCAGGAGTTTGAGTGC.................... 2711.001.00------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................CCCATCCCCAGGTCGGGCG.................................................................................................. 191.000.00---------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................CGACCTGGGGATGGGCAGGCCGAGG...................................................................................................... 2511.001.00--------1.00---------------------------------------------------------------------------------------------
................................................................................................................................CGCGACCTGGGGATGGGCAGGC.................................................................................................... 2211.001.00------1.00-----------------------------------------------------------------------------------------------
.............................................................................................GCGCGCGCCGGACAGG............................................................................................................................................. 161.000.00---------------------------------------------------------------1.00--------------------------------------