ID: uc010dkq.1_intron_20_0_chr18_5614423_r.5p
GENE: EPB41L3(1)
chr18:5628721-5628970-


(2)
AGO2.ip
(2)
B-CELL
(1)
BRAIN
(21)
BREAST
(11)
CELL-LINE
(9)
CERVIX
(6)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(50)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
AAGCCGGGGAGCTCCTGGCCGGCGGCTGGCGGGGAAGCGCGGCGCGGGAGGTGGGGTGGCCTGGCTGGTGCTGCGGGAGGGCGCCCCGGGCGCGTCAGGGGCTGCGTGCCGCGGCTGGAGGGCGCGCCGGGAGCTGCGGCGGGCTCGGGGCACCCGAGTGGCGCTGGAAGTTGAGCCGGGGTCCGCAGGGCTCGGTGACCGCCCTGGCGCCGCCGCTGCGGATTCGGGAGCAGCAACCACGCGGCGCGTT
.....................................................................(((((((....(((((((.((....)).))))).))...))))))).......................................................................................................................................
....................................................................69......................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR343337SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR343336SRR553576(SRX182782)
source: Testis. (testes)
.......................................................................................................GCGTGCCGCGGCTGGACG.................................................................................................................................18124.0012.00--3.00-2.00--1.00---1.00-1.00--1.00-1.00---1.00-1.00--1.00-1.00---1.00-------1.00----1.00-1.00---1.00------1.00-------------------1.001.00-1.00------------1.00----------------
.......................................................................................................GCGTGCCGCGGCTGGACGAG...............................................................................................................................20116.0012.004.00----------1.001.00--------1.00-2.00-1.00-1.00----------1.00----------1.00--------1.00-1.00----1.00----------------------------------------------
.......................................................................................................GCGTGCCGCGGCTGGACGA................................................................................................................................19115.0012.00--1.00---1.00--2.00------1.00---1.001.00------1.001.00----1.00----1.00-----1.00--------------------------1.00------------1.00-----------1.00--------------
.......................................................................................................GCGTGCCGCGGCTGGAC..................................................................................................................................17113.0012.00-1.00-2.00---------1.00-2.001.00--------1.00------1.00--1.00-1.00---------------------------------------------------1.00------1.00---------------
.......................................................................................................GCGTGCCGCGGCTGG....................................................................................................................................15113.0013.001.001.00--1.00-1.001.00-----1.00-----1.00------2.00------1.00-----------------------1.00------------1.00-----------------------1.00-----------------
.......................................................................................................GCGTGCCGCGGCTGGA...................................................................................................................................16112.0012.00----------1.00-2.00--1.00---1.00---1.001.00---------1.001.00------1.00-----------------------------------------1.00-1.00-------------------------
........................................................................................................CGTGCCGCGGCTGGACG.................................................................................................................................17211.007.50-0.501.00-1.00-0.500.50-0.500.500.50--------1.00-1.00-----0.50---1.00----0.50-----0.500.50------------------------------------------------------0.50------0.50-----
........................................................................................................CGTGCCGCGGCTGGA...................................................................................................................................1527.507.50-0.50----1.500.50----0.50-------0.50----0.50---0.50------------0.500.50-------------------------------------------------1.00-------0.50-0.50--------
........................................................................................................CGTGCCGCGGCTGGAC..................................................................................................................................1624.507.50-0.50-----1.00-0.50----------0.50-----0.50----------0.50---0.50---0.50------------------------------------------------------------------
.................................................................................CGCCCCGGGCGCGTCGCGC......................................................................................................................................................194.000.00----------1.00------------------------------------1.00--------------1.00---------------------------1.00---------------------
.........................................................................CGGGAGGGCGCCCCGC.................................................................................................................................................................164.000.00--------4.00-------------------------------------------------------------------------------------------------------
........................................................................................................CGTGCCGCGGCTGGACGAG...............................................................................................................................1923.507.501.00------------------------------------------0.50--0.50-0.500.50------------------------------------------------0.50-------------
........................................................................................................CGTGCCGCGGCTGGACGA................................................................................................................................1823.507.50---------0.50-----------1.00-----0.50-------------------0.50--------------------------------------------------------0.500.50------
.........................................................................CGGGAGGGCGCCCCGCCG...............................................................................................................................................................183.000.00-----------1.00--------------------------------1.00------1.00------------------------------------------------------------
.............................................................................AGGGCGCCCCGGGCGGGT...........................................................................................................................................................1822.000.50----------------------------------------------------------------1.00--------1.00--------------------------------------
................................................................................................................................GGGAGCTGCGGCGGGGTCT.......................................................................................................192.000.00-----2.00----------------------------------------------------------------------------------------------------------
.................................................................................CGCCCCGGGCGCGTCGCGA......................................................................................................................................................191.000.00---1.00------------------------------------------------------------------------------------------------------------
.........................................................................CGGGAGGGCGCCCCGCCA...............................................................................................................................................................181.000.00--------------1.00-------------------------------------------------------------------------------------------------
.............................................................................AGGGCGCCCCGGGCGGGTC..........................................................................................................................................................1921.000.50-----------------------------------------------------1.00----------------------------------------------------------
...................................................................................................................................AGCTGCGGCGGGCTCGCGGC...................................................................................................201.000.00-------------------------------------------------------1.00--------------------------------------------------------
.............CCTGGCCGGCGGCTGGCTT..........................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------1.00----------------------------------
.....................................................................GCTGCGGGAGGGCGCGTG...................................................................................................................................................................181.000.00--------------------------------------------------------------------1.00-------------------------------------------
............................................................................GAGGGCGCCCCGGGCGGGT...........................................................................................................................................................191.000.00--------------------------------------------------------------------------1.00-------------------------------------
.........................................................................CGGGAGGGCGCCCCGCCGG..............................................................................................................................................................191.000.00-------------------------------------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................ACCGCCCTGGCGCCGCA....................................171.000.00------------------1.00---------------------------------------------------------------------------------------------
...................................AGCGCGGCGCGGGAGGCCC....................................................................................................................................................................................................191.000.00-------------------------------1.00--------------------------------------------------------------------------------
.......................................CGGCGCGGGAGGTGGGT..................................................................................................................................................................................................171.000.00---------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................GGGAGCTGCGGCGGGGT.........................................................................................................171.000.00-----1.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................CGCGCCGGGAGCTGCGCGGC............................................................................................................201.000.00-------------------------------1.00--------------------------------------------------------------------------------
...................CGGCGGCTGGCGGGGAAGCGCGG................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00--------------------
......................................................................................................TGCGTGCCGCGGCTGGACG.................................................................................................................................191.000.00----------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................CGGGAGCTGCGGCGGGTACC.......................................................................................................201.000.00------------------------------------------------------1.00---------------------------------------------------------
..........................................................................................CGCGTCAGGGGCTGCGTG..............................................................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00-----------------------
.................................................................................CGCCCCGGGCGCGTCGCGT......................................................................................................................................................191.000.00----------------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................GCGTGCCGCGGCTGGACGAA...............................................................................................................................2011.0012.00--------------------------------------------------------------------------------------------1.00-------------------
.......................................................................................................GCGTGCCGCGGCTGGAGAGGC..............................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------
..........................................................................GGGAGGGCGCCCCGGTCGG.............................................................................................................................................................191.000.00---------------------------------------------------------------1.00------------------------------------------------
........GAGCTCCTGGCCGGCGGCTGGCGGG.........................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------1.00----------------------------
......................................................................................................................................................................................................CCGCCCTGGCGCCGCGC...................................171.000.00-----------------1.00----------------------------------------------------------------------------------------------
..........................TGGCGGGGAAGCGCGCTT..............................................................................................................................................................................................................181.000.00-------------------------------------------------------------------1.00--------------------------------------------
........................................................................GCGGGAGGGCGCCCCGC.................................................................................................................................................................171.000.00-----1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................CGGCTGGAGGGCGCGCGCC........................................................................................................................191.000.00---------------------------------------------------------------------------1.00------------------------------------
.....................................................................................................................................................................................................ACCGCCCTGGCGCCGGGG...................................181.000.00-----------------1.00----------------------------------------------------------------------------------------------
.........................................................................................................GTGCCGCGGCTGGAGGG................................................................................................................................1711.001.00--------------------------------------------------------1.00-------------------------------------------------------
........................................GGCGCGGGAGGTGGGAT.................................................................................................................................................................................................171.000.00----------------------------------------------------------------------------1.00-----------------------------------
...............................................................................GGCGCCCCGGGCGCGTGG.........................................................................................................................................................181.000.00-----------------1.00----------------------------------------------------------------------------------------------
.............CCTGGCCGGCGGCTGGCGGGG........................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------
.........................................................................CGGGAGGGCGCCCCGGGAGAG............................................................................................................................................................211.000.00---------------------------------------------------------------------------------------1.00------------------------
........................................................................................................................................................................................................................TGCGGATTCGGGAGCAGCTT..............201.000.00--------------------------------------1.00-------------------------------------------------------------------------
.........................................................................CGGGAGGGCGCCCCGCCGC..............................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00---------------------------------
.....................................................................GCTGCGGGAGGGCGCG.....................................................................................................................................................................161.000.00----------------------------1.00-----------------------------------------------------------------------------------
.......................................................................................................GCGTGCCGCGGCTGGATG.................................................................................................................................1811.0012.00-1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................GAGCTGCGGCGGGCTGG.......................................................................................................171.000.00------------------------------------------------------------------1.00---------------------------------------------
.........................................................................CGGGAGGGCGCCCCGCCC...............................................................................................................................................................181.000.00---1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................GCGTGCCGCGGCTGGTCG.................................................................................................................................1811.0013.00--------------------------------------------------1.00-------------------------------------------------------------
........................................................................................................CGTGCCGCGGCTGGACTA................................................................................................................................1820.507.50--0.50-------------------------------------------------------------------------------------------------------------
.............................................................................AGGGCGCCCCGGGCG..............................................................................................................................................................1520.500.500.50---------------------------------------------------------------------------------------------------------------
........................................................................................................CGTGCCGCGGCTGGATG.................................................................................................................................1720.507.50----------------------------------------------------------------------------------------------------0.50-----------
....................................................................TGCTGCGGGAGGGCGC......................................................................................................................................................................1640.250.25-------------------------------------------------------------------------------------------------------------0.25--
....................................................................TGCTGCGGGAGGGCGCG.....................................................................................................................................................................1740.250.25----0.25-----------------------------------------------------------------------------------------------------------
......................................GCGGCGCGGGAGGTG.....................................................................................................................................................................................................1590.110.11---------------------------------------------------------------------------------------------------------------0.11

Antisense strand
AAGCCGGGGAGCTCCTGGCCGGCGGCTGGCGGGGAAGCGCGGCGCGGGAGGTGGGGTGGCCTGGCTGGTGCTGCGGGAGGGCGCCCCGGGCGCGTCAGGGGCTGCGTGCCGCGGCTGGAGGGCGCGCCGGGAGCTGCGGCGGGCTCGGGGCACCCGAGTGGCGCTGGAAGTTGAGCCGGGGTCCGCAGGGCTCGGTGACCGCCCTGGCGCCGCCGCTGCGGATTCGGGAGCAGCAACCACGCGGCGCGTT
.....................................................................(((((((....(((((((.((....)).))))).))...))))))).......................................................................................................................................
....................................................................69......................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR343337SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038857(GSM458540)
D20. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR343336SRR553576(SRX182782)
source: Testis. (testes)
..........................................................................GGGAGGGCGCCCCGGGCC.............................................................................................................................................................. 182.000.00------------------------------1.00---------1.00-----------------------------------------------------------------------
............................................................................CGCCCGGGGCGCCCTC.............................................................................................................................................................. 1622.002.00--------------1.00---------------1.00---------------------------------------------------------------------------------
.......................................................CCCGCAGCACCAGCCAGGCCAC............................................................................................................................................................................. 2221.501.50-------------------1.00-------------------------------------------------------------0.50------------------------------
....................................................................................................................GGAGGGCGCGCCGGGAGG.................................................................................................................... 181.000.00------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................................CCCTGGCGCCGCCGCGA................................ 171.000.00---1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................TGGAGGGCGCGCCGGGATT.................................................................................................................... 191.000.00------------------------------------1.00---------------------------------------------------------------------------
......................................................................................................................................................CACCCGAGTGGCGCTAGTG................................................................................. 191.000.00------------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CGCCCTGGCGCCGCCCGG................................. 181.000.00-----------------------------------------------------------------------1.00----------------------------------------
..........................................................................GGGAGGGCGCCCCGGGCCC............................................................................................................................................................. 191.000.00----------------------------------------1.00-----------------------------------------------------------------------
..........................................................................GGGAGGGCGCCCCGGGCGCC............................................................................................................................................................ 201.000.00--------------1.00-------------------------------------------------------------------------------------------------
...........................................................................GGAGGGCGCCCCGGGTG.............................................................................................................................................................. 171.000.00---------------------------------------------------------------------1.00------------------------------------------
.........................................................CCGCAGCACCAGCCAGGCC.............................................................................................................................................................................. 1920.500.50-------------0.50--------------------------------------------------------------------------------------------------
..........................................................CCCGCAGCACCAGCCAGGC............................................................................................................................................................................. 1920.500.50---------------------------------------------------------------------------------0.50------------------------------
...........................................................CTCCCGCAGCACCAGCCAGG........................................................................................................................................................................... 2020.500.50-----------------------------------------------------------------------------------------------------------0.50----
.............................................CAGGCCACCCCACCTCCC........................................................................................................................................................................................... 1820.500.50------------------------0.50---------------------------------------------------------------------------------------
.......................................................CTCCCGCAGCACCAGCCAGGCCAC........................................................................................................................................................................... 2420.500.50------------------------------------------------------------------------------------------------------0.50---------
..........................................................................CCCGGGGCGCCCTCCC................................................................................................................................................................ 1690.440.44------------------------------0.33-------------------------------------------------------------------------------0.11-
.........................................................GCAGCACCAGCCAGGCC................................................................................................................................................................................ 1730.330.33------------------------0.33---------------------------------------------------------------------------------------
.................................................................................................................CCGGCGCGCCCTCCAGC........................................................................................................................ 1730.330.33------------------------------------------------------------------------------------------------------------0.33---
...........................................................................GCCCGGGGCGCCCTCC............................................................................................................................................................... 1640.250.25--------------0.25-------------------------------------------------------------------------------------------------