ID: uc010dfk.1_intron_4_0_chr17_71257123_r.5p
GENE: CPSF4L(1)
chr17:71257655-71257904-


(1)
AGO1.ip
(3)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(1)
BREAST
(23)
CELL-LINE
(5)
CERVIX
(4)
HEART
(1)
HELA
(3)
LIVER
(1)
OTHER
(12)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
TGTCGAGATGCAGAAGGGCACTGGGCTCCTGCCTTTCCAGGGCATGGACAGTGAGTGAGGGTGGGGCCACTTTCCCTCCCCTACCTTCTCTGTTTTTTTTTCTTTGAGACGGAGTCTCGCTCTGTAGCCCAGGCTGGAGTGTAGTGGCACAATCTCGGCTCATTGCAAGCTCTGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGGAGCTGGGACTACAGGCGCCCGCCACCACGCCCAG
............................................................................................................((((((.....)))))).((..((((.((((...((((((.....(((((......(((.....)))...))))).....)))))))))).))))..))...........................................
...........................................................................................................108..................................................................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040035(GSM532920)
G001T. (cervix)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR390723(GSM850202)
total small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925PAZD5SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040031(GSM532916)
G013T. (cervix)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAGGCGCGCG.............244.000.004.00------------------------------------------------------------
................................................................................................TTTTTCTTTGAGACGGAGTCTCGCAG................................................................................................................................264.000.004.00------------------------------------------------------------
.................................................................................................................................................................ATTGCAAGCTCTGCCTCCTGGGTCCA...............................................................263.000.003.00------------------------------------------------------------
.........................................................................................................................................................................CTCTGCCTCCTGGGTTCACGCCACCC.......................................................262.000.00-2.00-----------------------------------------------------------
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAGG...................1802.002.00----1.001.00-------------------------------------------------------
................................................................................................................AGTCTCGCTCTGTAGCCCAGGCCGA.................................................................................................................252.000.002.00------------------------------------------------------------
......................................................................................TCTCTGTTTTTTTTTCAGT.................................................................................................................................................192.000.002.00------------------------------------------------------------
...................................................................................................TTCTTTGAGACGGAGTCTCGCTCTGCTGC..........................................................................................................................292.000.00-2.00-----------------------------------------------------------
..............................................................................................TTTTTTTCTTTGAGACGGAGTCTGT...................................................................................................................................252.000.00-2.00-----------------------------------------------------------
............................................................................................................................TAGCCCAGGCTGGAGTGTAGTGACGC....................................................................................................262.000.002.00------------------------------------------------------------
........TGCAGAAGGGCACTGGAGCT..............................................................................................................................................................................................................................201.000.00---------------------------------------1.00---------------------
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAGGGATT...............2201.002.00-1.00-----------------------------------------------------------
..............................................................................................TTTTTTTCTTTGAGACGGAGCCCC....................................................................................................................................241.000.001.00------------------------------------------------------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCACGCCCACCC261.000.001.00------------------------------------------------------------
............................................................................................................................................................................................................AGCCTCCCGAGGAGCTGGGACAGC......................241.000.001.00------------------------------------------------------------
.............................................................................................TTTTTTTTCTTTGAGACGGAGGC......................................................................................................................................231.000.00-1.00-----------------------------------------------------------
......................................................................................................................................................................................................TGCCTCAGCCTCCCGAGGACCGG.............................231.000.001.00------------------------------------------------------------
......................................................................................................................GCTCTGTAGCCCAGGCAGCG................................................................................................................201.000.00----------------------------------1.00--------------------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCACGCACCG241.000.00-1.00-----------------------------------------------------------
............................................................................................TTTTTTTTTCTTTGAGACGCGG........................................................................................................................................221.000.00-1.00-----------------------------------------------------------
........................................................................................................................................................................................................................AGCTGGGACTACAGGCGCCGGCC...........231.000.00-----1.00-------------------------------------------------------
...............................................................................................................................................................................................................................ACTACAGGCGCCCGCCCACA.......201.000.00-------------1.00-----------------------------------------------
........................................................................................................................................................................................................................AGCTGGGACTACAGGCGCCCGCCACCACGCCGCC341.000.001.00------------------------------------------------------------
.............................................................................................TTTTTTTTCTTTGAGACGGAGGCA.....................................................................................................................................241.000.00---------------1.00---------------------------------------------
.......................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCT.............................................221.000.00-----1.00-------------------------------------------------------
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAGGCGCCGGCT...........261.000.00---------------------------------------------------1.00---------
............................................................................................................................................................................................................................GGGACTACAGGCGCCCGCCACCACGCCCACTC321.000.00---1.00---------------------------------------------------------
.............................................................................................................................AGCCCAGGCTGGAGTGTAGTGACGC....................................................................................................251.000.001.00------------------------------------------------------------
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAGGCGCCCAGG...........261.000.001.00------------------------------------------------------------
.................................................................................................................................................................................................................CCCGAGGAGCTGGGACTACAGGCATGG..............271.000.001.00------------------------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCACGCCATCTCC.....................................................301.000.001.00------------------------------------------------------------
....................................................................................................TCTTTGAGACGGAGTCTCGCGCTG..............................................................................................................................241.000.00-1.00-----------------------------------------------------------
.....................................................................................................................................................................................................................AGGAGCTGGGACTACAG....................1701.001.00------1.00------------------------------------------------------
............................................................................................TTTTTTTTTCTTTGAGACGGAGTATT....................................................................................................................................261.000.00-1.00-----------------------------------------------------------
................................................................................................................................................................................................................TCCCGAGGAGCTGGGACTACAGGTACG...............271.000.001.00------------------------------------------------------------
...................................................................................CCTTCTCTGTTTTTTTTTCTTG.................................................................................................................................................221.000.00-------------------1.00-----------------------------------------
............................................................................................................................................................................................................AGCCTCCCGAGGAGCTGGGAAGAC......................241.000.001.00------------------------------------------------------------
......................................................................................................TTTGAGACGGAGTCTCGCGCCG..............................................................................................................................221.000.001.00------------------------------------------------------------
..............................................................................................................................GCCCAGGCTGGAGTGTAGTGGAAAG...................................................................................................251.000.001.00------------------------------------------------------------
..............................................................................................TTTTTTTCTTTGAGACGGAGGCT.....................................................................................................................................231.000.001.00------------------------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTCACGTCAC.........................................................281.000.001.00------------------------------------------------------------
.............................................................................................TTTTTTTTCTTTGAGACGGGGGC......................................................................................................................................231.000.00-1.00-----------------------------------------------------------
..........................................................................................................................................................................................................................CTGGGACTACAGGCGCCGG.............191.000.00--1.00----------------------------------------------------------
..................................................GTGAGTGAGGGTGGGGGTC.....................................................................................................................................................................................191.000.00--------1.00----------------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCACGCCTCC........................................................271.000.001.00------------------------------------------------------------
...................................................................................................................................................................................................................CGAGGAGCTGGGACTACA.....................1801.001.00----------------------------------------1.00--------------------
..........................................................................................TGTTTTTTTTTCTTTGAGACTGAG........................................................................................................................................241.000.00-1.00-----------------------------------------------------------
.........................................................................................................................................................................................................CTCAGCCTCCCGAGGAGCTG.............................2001.001.00-----------------------------------------1.00-------------------
..................................................................................................TTTCTTTGAGACGGAGTCTGC...................................................................................................................................211.000.00-1.00-----------------------------------------------------------
..............................................................................................................................................................................................................CCTCCCGAGGAGCTGGGACTCTG.....................231.000.00---1.00---------------------------------------------------------
..........................................................................................................AGACGGAGTCTCGCTCTGTAGCCCAGGCCAG.................................................................................................................311.000.00---------------1.00---------------------------------------------
................................................................................................................................................................................TCCTGGGTTCACGCCATTCTCCTGCCTCAAA...........................................311.000.00---1.00---------------------------------------------------------
......................................................................................................................................................................................................TGCCTCAGCCTCCCGAGGAGCGGGA...........................251.000.001.00------------------------------------------------------------
.........................................................................................CTGTTTTTTTTTCTTTGAGACGG..........................................................................................................................................2311.001.001.00------------------------------------------------------------
......................................................................................TCTCTGTTTTTTTTTCTTTTTCC.............................................................................................................................................231.000.00-1.00-----------------------------------------------------------
............................................................................................................................TAGCCCAGGCTGGAGTGTAGCGAT......................................................................................................241.000.00-1.00-----------------------------------------------------------
................................................................................................................................................................................................................TCCCGAGGAGCTGGGACTACAGAGGC................261.000.00---1.00---------------------------------------------------------
................................................................................................................AGTCTCGCTCTGTAGCCCAGGCGGAG................................................................................................................261.000.00-1.00-----------------------------------------------------------
................................................................................................................................................................................TCCTGGGTTCACGCCATTGCAC....................................................221.000.00---1.00---------------------------------------------------------
..................................................................................................TTTCTTTGAGACGGAGTCTGGG..................................................................................................................................221.000.00-1.00-----------------------------------------------------------
.................................................................................................................................CAGGCTGGAGTGTAGTGGCACAATAA...............................................................................................261.000.00--------------------------------------------------------1.00----
.................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGAGGAGCTGGGT..........................311.000.00-1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCACGCCCAACA261.000.001.00------------------------------------------------------------
..............................................................................................TTTTTTTCTTTGAGACGGAGTCGCAC..................................................................................................................................261.000.00-1.00-----------------------------------------------------------
............................................................................................................................................................................................................................GGGACTACAGGCGCCCGCAAA.........211.000.00------------------------1.00------------------------------------
......................................................................................TCTCTGTTTTTTTTTCTTTGC...............................................................................................................................................211.000.001.00------------------------------------------------------------
...............................................................................................TTTTTTCTTTGAGACGGAGGCCC....................................................................................................................................231.000.001.00------------------------------------------------------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCACGCCCACCTG271.000.001.00------------------------------------------------------------
..........................................................................................................................................................................................ACGCCATTCTCCTGCCTCAGCCTCCCGACC..................................301.000.001.00------------------------------------------------------------
...................................................................................................TTCTTTGAGACGGAGTCTCGCTCTGCTG...........................................................................................................................281.000.001.00------------------------------------------------------------
..................................................................................................................................................................................................................CCGAGGAGCTGGGACTACAG....................2001.001.00------1.00------------------------------------------------------
......................................................................................................................................................................................................................................GCGCCCGCCACCACGCCCAG2001.001.00---------------------------------------------1.00---------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCACGCCCAAAC261.000.001.00------------------------------------------------------------
...................................................................................................................................................................................................................CGAGGAGCTGGGACTCTG.....................181.000.00---------1.00---------------------------------------------------
......................................................................................................................................................................................................TGCCTCAGCCTCCCGAGGAGCCGAA...........................251.000.001.00------------------------------------------------------------
.............................................................................................TTTTTTTTCTTTGAGACGGAGTGCC....................................................................................................................................251.000.001.00------------------------------------------------------------
................................................................................................................................CCAGGCTGGAGTGTAGTGGCAGGGG.................................................................................................251.000.00---1.00---------------------------------------------------------
........................................................................................................................TCTGTAGCCCAGGCTGGCTTA.............................................................................................................211.000.00------------------------------------------------1.00------------
...................................................................................................TTCTTTGAGACGGAGTCTGGCC.................................................................................................................................221.000.001.00------------------------------------------------------------
..............................................................................................................................GCCCAGGCTGGAGTGTATTTG.......................................................................................................211.000.00--------------------------------1.00----------------------------
............................................................................................TTTTTTTTTCTTTGAGACGGTGCC......................................................................................................................................241.000.00-1.00-----------------------------------------------------------
...............................................................................................................................................................................................ATTCTCCTGCCTCAGCCTCCCGAGGAGCGGGA...........................321.000.001.00------------------------------------------------------------
.................................................................................................TTTTCTTTGAGACGGAGTCTCTCC.................................................................................................................................241.000.001.00------------------------------------------------------------
........................................................................................................................................................................................................................AGCTGGGACTACAGGCGCCGCAG...........231.000.001.00------------------------------------------------------------
...................................................................................................TTCTTTGAGACGGAGTCTCGCACC...............................................................................................................................241.000.001.00------------------------------------------------------------
....................................................................................................................................GCTGGAGTGTAGTGGCAGGGG.................................................................................................211.000.00-----------------1.00-------------------------------------------
....................................................................................................................................GCTGGAGTGTAGTGGCACATA.................................................................................................211.000.00-----------------1.00-------------------------------------------
..................................................................................................................................AGGCTGGAGTGTAGTGGCACA...................................................................................................2101.001.00----------------1.00--------------------------------------------
.......................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCTAA...........................................241.000.00--------1.00----------------------------------------------------
.......................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA............................................231.000.00---------------------------1.00---------------------------------
............................................................................................................................TAGCCCAGGCTGGAGTGTAGTGGCACGAAC................................................................................................301.000.00-1.00-----------------------------------------------------------
.................................................................................................TTTTCTTTGAGACGGAGAA......................................................................................................................................191.000.00----------------------------------------------------------1.00--
....................................................................................................TCTTTGAGACGGAGTCTCGCTCCAC.............................................................................................................................251.000.001.00------------------------------------------------------------
.........................................................................................................................................................................CTCTGCCTCCTGGGTTCACGCCATCCCC.....................................................281.000.001.00------------------------------------------------------------
...............................................................................................................................................................................................................................ACTACAGGCGCCCGCCAAAT.......201.000.00------------------------------------------------------1.00------
..........................................................................................TGTTTTTTTTTCTTTGGGA.............................................................................................................................................191.000.001.00------------------------------------------------------------
..........................................................................................TGTTTTTTTTTCTTTGAGACAGGG........................................................................................................................................241.000.001.00------------------------------------------------------------
............................................................................................TTTTTTTTTCTTTGAGACGGACCG......................................................................................................................................241.000.00-1.00-----------------------------------------------------------
................................................................................................TTTTTCTTTGAGACGGAGTCTCGCTCTGTACG..........................................................................................................................321.000.00----------------------------1.00--------------------------------
....................................CCAGGGCATGGACAGCAA....................................................................................................................................................................................................181.000.00--------------------------------------------------1.00----------
...............................................................................................................................................................................................ATTCTCCTGCCTCAGCCTCCCGAGGAGCCTGG...........................321.000.001.00------------------------------------------------------------
...................................................................................................TTCTTTGAGACGGAGTCTCGCTCTGCACG..........................................................................................................................291.000.001.00------------------------------------------------------------
....................................................................................................................TCGCTCTGTAGCCCAGGCCGGC................................................................................................................221.000.00-1.00-----------------------------------------------------------
..........................................................................................TGTTTTTTTTTCTTTGAGACGGAG........................................................................................................................................2440.500.50-0.50-----------------------------------------------------------
..........................................................................................TGTTTTTTTTTCTTTGAGACGGAGCC......................................................................................................................................2640.250.50-0.25-----------------------------------------------------------

Antisense strand
TGTCGAGATGCAGAAGGGCACTGGGCTCCTGCCTTTCCAGGGCATGGACAGTGAGTGAGGGTGGGGCCACTTTCCCTCCCCTACCTTCTCTGTTTTTTTTTCTTTGAGACGGAGTCTCGCTCTGTAGCCCAGGCTGGAGTGTAGTGGCACAATCTCGGCTCATTGCAAGCTCTGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGGAGCTGGGACTACAGGCGCCCGCCACCACGCCCAG
............................................................................................................((((((.....)))))).((..((((.((((...((((((.....(((((......(((.....)))...))))).....)))))))))).))))..))...........................................
...........................................................................................................108..................................................................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040035(GSM532920)
G001T. (cervix)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR390723(GSM850202)
total small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925PAZD5SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040031(GSM532916)
G013T. (cervix)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCACTG............................................................ 2310.000.00---1.00---4.00------------1.00----1.00-----1.00-----------------1.00--1.00--------
................................................................................................................................................................................................................................CTACAGGCGCCCGCCAGC........ 183.000.00--2.00-1.00--------------------------------------------------------
..............................................................................................................................................AGTGGCACAATCTCGGCCTG........................................................................................ 203.000.00----------------------1.00-------1.00------------1.00-----------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCACGCCATTGTAG.................................................... 312.000.00-2.00-----------------------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCAACAG........................................................... 242.000.002.00------------------------------------------------------------
..........................................................................................................................................................................................................................CTGGGACTACAGGCGCCCGCCACCAT...... 262.000.00--1.00-1.00--------------------------------------------------------
........................................................................................................TGAGACGGAGTCTCGCTCTGTTCT.......................................................................................................................... 242.000.00--------2.00----------------------------------------------------
.......................................................................................................................................................................................................................................CTGGGCGTGGTGGCGGGCG 1902.002.00------1.00----------------------------------------------1.00-------
.......................................................................................................................................................................................................................................CGCCCGCCACCACGCCCATTT 212.000.00------------2.00------------------------------------------------
.......................................................................................................................................................................................................................................CGCCCGCCACCACGCCCAGGA 211.000.00------------------------------------1.00------------------------
...................................................................................................................................................................TGCAAGCTCTGCCTCCTGGGTTCATCG............................................................ 271.000.00-1.00-----------------------------------------------------------
......................................................................................................................................................................................................CCTCGGGAGGCTGAGGCA.................................. 1801.001.00---------------------------------1.00---------------------------
.................................................................................................................GTCTCGCTCTGTAGCCCAGGCTGGAGTGTCCTG........................................................................................................ 331.000.00-1.00-----------------------------------------------------------
.........................................................................................................................................................................CTCTGCCTCCTGGGTTCACGCCAGGCG...................................................... 271.000.00-1.00-----------------------------------------------------------
.........................................................................................................................................................................CTCTGCCTCCTGGGTTCACGCCATAC....................................................... 261.000.00-1.00-----------------------------------------------------------
...............................................................................................................TGGGCTACAGAGCGAGACTC....................................................................................................................... 2001.001.00-----1.00-------------------------------------------------------
.............................................................................................................................................................................................................GCCTCCCGAGGAGCTGGGACTCGGA.................... 251.000.001.00------------------------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTTAAA............................................................. 241.000.00-----------------------1.00-------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCATTCTTT.................................................... 301.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCACGCCATCC....................................................... 281.000.00-1.00-----------------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCACCGC...................................................... 281.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................................................................................GCCTCAGCCTCCCGAGGAGCTGGGG.......................... 251.000.00-------------------1.00-----------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTAATA............................................................. 241.000.00----------------------------------------------1.00--------------
.......................................................................................................................................................................................................GCCTCAGCCTCCCGAGGACAGG............................. 221.000.00-1.00-----------------------------------------------------------
.................................................................................................................................................................................................................CCCGAGGAGCTGGGACTACAGGCCGG............... 261.000.00-----------------------------------1.00-------------------------
.......................................................................................................................................................................AGAATGGCGTGAACCCAGGAGGCAGAGCT...................................................... 2901.001.00----1.00--------------------------------------------------------
................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGAGGAGCTCCGG.......................... 321.000.00-1.00-----------------------------------------------------------
.................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGAGGAGC............................... 261.000.001.00------------------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTGGTG............................................................. 211.000.00-1.00-----------------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTGCCG............................................................. 211.000.001.00------------------------------------------------------------
....................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGGACAG.............................. 241.000.00-1.00-----------------------------------------------------------
..........................................................................................................................................................................ATGGCGTGAACCCAGGAGGCAGA......................................................... 2301.001.00------1.00------------------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTAT............................................................... 221.000.00------------------------------------------1.00------------------
.............................................................................................................CGGAGTCTCGCTCTGTGGCC......................................................................................................................... 201.000.00-1.00-----------------------------------------------------------
...............................................................................CCTACCTTCTCTGTTTTGAG....................................................................................................................................................... 201.000.00-1.00-----------------------------------------------------------
........................................................................................................TGAGACGGAGTCTCGCTCTGTTTAT......................................................................................................................... 251.000.00--------1.00----------------------------------------------------
.....................................................................................................................................................................................................CTGCCTCAGCCTCCCGAGGAGGA.............................. 231.000.00----------1.00--------------------------------------------------
..................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGAGGAGCTGAAC.......................... 301.000.00-1.00-----------------------------------------------------------
.................................................................................TCTCAAAGAAAAAAAAACAGAGAAGGTA............................................................................................................................................. 2811.001.00--------------------------------------------1.00----------------
................................................................................................................................................GCAATGAGCCGAGATTGTGCCA.................................................................................... 2201.001.00------------------1.00------------------------------------------
..................................................................................................................................................................TTGCAAGCTCTGCCTCCTGGGTTCAGCG............................................................ 281.000.001.00------------------------------------------------------------
.........................................................................................................................................................................AGGAGAATGGCGTGAACCCAGGAGGCAGAG................................................... 3001.001.00-----1.00-------------------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTAAAA............................................................. 241.000.00-----------1.00-------------------------------------------------
....................................................................................................................................................................................................................GAGGAGCTGGGACTACAGGCGCCCGCCACGG....... 311.000.00-1.00-----------------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCATACC...................................................... 281.000.00-1.00-----------------------------------------------------------
................................................................................................................AGTCTCGCTCTGTAGCCCAGGCTGGAGTGAC........................................................................................................... 311.000.00-1.00-----------------------------------------------------------
...................................................................................................................................................................................................................................CTGGGCGTGGTGGCGGGCGCCTG 2301.001.00------1.00------------------------------------------------------
........................................................................................................................................................................................................CCTCAGCCTCCCGAGGAGCTGGGACTAGGG.................... 301.000.001.00------------------------------------------------------------
......................................................................................................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA....................................... 291.000.00--------------1.00----------------------------------------------
.......................................................................................................................................................................AGGAGAATGGCGTGAACCCAGGAGGCAGAGCT................................................... 3201.001.00--1.00----------------------------------------------------------
...........................................................................................................................................................................................................................TGGGACTACAGGCGCCCGCCATTGT...... 251.000.00---------1.00---------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCATCCTC..................................................... 291.000.00-1.00-----------------------------------------------------------
................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGAGGACCTC............................. 291.000.00-1.00-----------------------------------------------------------
.............................................................................................................................................................................................................CCTGTAGTCCCAGCTCCTCGGGAGGC................... 2601.001.00-----1.00-------------------------------------------------------
....................................................................................................................................................................GCAAGCTCTGCCTCCTGGGTTGGCG............................................................. 251.000.001.00------------------------------------------------------------
..................................................................................................................................................................................................................................ACAGGCGCCCGCCACCCCAT.... 201.000.00--------------------------------------1.00----------------------
................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGAGGAGCTGAGT.......................... 321.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................GCGGGCGCCTGTAGTCCCAGCTC............ 2301.001.00----------------1.00--------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGGTTAAA.............................................................. 231.000.00-----------1.00-------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCATCCG...................................................... 281.000.00-1.00-----------------------------------------------------------
...................................................................................................................................GGCTGGAGTGTAGTGGCAGGAC................................................................................................. 221.000.00-1.00-----------------------------------------------------------
.........................CTCCTGCCTTTCCAGGGGGA............................................................................................................................................................................................................. 201.000.00----------1.00--------------------------------------------------
.........................................................................................................................................................................................................................................CCCGCCACCACGCCCAGCGA 201.000.00---------------------1.00---------------------------------------
...................................................................................................................................GGCTGGAGTGTAGTGGCACAATGGAC............................................................................................. 261.000.00-1.00-----------------------------------------------------------
..............................................................................................................................................................................................................................GACTACAGGCGCCCGCCACCAA...... 221.000.00--1.00----------------------------------------------------------
........................................................................................................................................................................GCTCTGCCTCCTGGGTTCACGCCACCG....................................................... 271.000.001.00------------------------------------------------------------
..............................................................................................................................................AGTGGCACAATCTCGGCTCTG....................................................................................... 211.000.00--------------------------1.00----------------------------------
......................................................................................................................................TGGAGTGTAGTGGCACCCA................................................................................................. 191.000.00---------1.00---------------------------------------------------
.........................................................................................................................................................................................CACGCCATTCTCCTGTAG............................................... 181.000.00-----------------------------------------------1.00-------------
.............................................................................................................................................................................GCCTCCTGGGTTCACCGCG.......................................................... 191.000.00-------1.00-----------------------------------------------------
...................................................................................................................................................................TGCAAGCTCTGCCTCCTGGGTTCTTGA............................................................ 271.000.00--1.00----------------------------------------------------------
......................................................................................................................................................................................................................................TGGGCGTGGTGGCGGGCGC. 1901.001.00------------------1.00------------------------------------------
........................................................................................................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA...................................... 281.000.00-------------------------------------1.00-----------------------
.................................................................................................................GTCTCGCTCTGTAGCCCAGGCTCTG................................................................................................................ 251.000.001.00------------------------------------------------------------
...................................................................................................................................GGCTGGAGTGTAGTGGCACAGGGC............................................................................................... 241.000.001.00------------------------------------------------------------
......................................................................................................................................................................AAGCTCTGCCTCCTGTAG.................................................................. 181.000.00-----------------------------------------------------------1.00-
.........................................................................................................................................................................................................................................CCCGCCACCACGCCCAGGGCG 211.000.00-1.00-----------------------------------------------------------
.........................................................................CCCTCCCCTACCTTCTCTCTG............................................................................................................................................................ 211.000.001.00------------------------------------------------------------
......................................................................................................................................................................AAGCTCTGCCTCCTGGGTTCACGG............................................................ 241.000.00---------------------------------------------------------1.00---
............................................................................................................................................................................................................................GGGACTACAGGCGCCCGGAGT......... 211.000.00--------------1.00----------------------------------------------
............................................................................................................................................................................................................................GGGACTACAGGCGCCCGCCACCACGTCTG. 291.000.00-------------------------------------------------------1.00-----
.........................................................................................................................................................................................................................GCTGGGACTACAGGCGCCCGCCAA......... 241.000.00--1.00----------------------------------------------------------
.................................................................................................................................................................................................CTCCTCGGGAGGCTGAGGCAGGAGA................................ 2501.001.00----1.00--------------------------------------------------------
.........................................................................................................................................................................GAGAATGGCGTGAACCCAGGAGGCAGAG..................................................... 2801.001.00----1.00--------------------------------------------------------
..................................................................................................................................................................................CTGGGTTCACGCCATTCTCCTGCCTCAGTAA......................................... 311.000.00-----------------------------1.00-------------------------------
....................................................................................CTTCTCTGTTTTTTTTTCCAC................................................................................................................................................. 211.000.00----------1.00--------------------------------------------------
.....................................................................................................................................................................CAAGCTCTGCCTCCTGGTAGA................................................................ 211.000.00-------------1.00-----------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTTCAAC............................................................. 221.000.00-1.00-----------------------------------------------------------
...................................................................................................................................................................TGCAAGCTCTGCCTCCTGGGTTCCG.............................................................. 251.000.00-1.00-----------------------------------------------------------
............................................................................................................................................................................................................................GGGACTACAGGCGCCCGCCAGGC....... 231.000.00------1.00------------------------------------------------------
.......................................................................................................................................................................AGCTCTGCCTCCTGGGTCTG............................................................... 201.000.00---1.00---------------------------------------------------------
................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGAGGAGCTCAG........................... 311.000.001.00------------------------------------------------------------
.........................................CACTCACTGTCCATGC................................................................................................................................................................................................. 1650.200.20------------------------------------------------------------0.20