uc010daj.1_intron_10_0_chr17_43362317

CGCCTTCACTTCATTCCTCTGCCCCCTCTCTGGTGCTGCCCGGCTCAGATCCCTGCCTTCGCCCCAGGGCTGCCTGGTTGTGAGGGCTCAGCTCAGCAGCCCTGGCAAGGTCACCAGCTGGAGAGTCTTCCTCACTGTAGCCCTGTAGCCCTCTGCTGCCCTGGCCACTGAAACTGTCCTCTCTCTCCTGCCAACCCCAGAAACTCAAGCCAGTGGATTATGAGTACCGAGAAGAAGTCCACTGGGCCAC
.................................................................................((((((.....((((..(((..(((..(((...(((..((((....))))...)))..)))..((((....)))).)))..)))..))))....)))))).....................................................................
..............................................................................79....................................................................................................181...................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR040036(GSM532921)
G243N. (cervix)

SRR040037(GSM532922)
G243T. (cervix)

SRR040040(GSM532925)
G612N. (cervix)

SRR029127(GSM416756)
A549. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR189787

SRR040039(GSM532924)
G531T. (cervix)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

SRR040038(GSM532923)
G531N. (cervix)

TAX577738(Rovira)
total RNA. (breast)

SRR040018(GSM532903)
G701N. (cervix)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR189786

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR040034(GSM532919)
G001N. (cervix)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

TAX577580(Rovira)
total RNA. (breast)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577746(Rovira)
total RNA. (breast)

SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR040029(GSM532914)
G026T. (cervix)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040011(GSM532896)
G529T. (cervix)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

TAX577740(Rovira)
total RNA. (breast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR553574(SRX182780)
source: Heart. (Heart)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577743(Rovira)
total RNA. (breast)

SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)

SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)

SRR029125(GSM416754)
U2OS. (cell line)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

...................................................................................GGGCTCAGCTCAGCAGGAAC...................................................................................................................................................

27.00

0.00

6.00

5.00

2.00

3.00

2.00

1.00

.........................................................................................................................................................................................................AACTCAAGCCAGTGGATTATGA...........................

11.00

3.00

1.00

8.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGAAA...................................................................................................................................................

7.00

0.00

3.00

2.00

1.00

5.00

1.00

4.00

2.00

5.00

1.00

2.00

...................................................................................GGGCTCAGCTCAGCAGTATC...................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGGCA...................................................................................................................................................

1.00

0.00

1.00

....................................................................................GGCTCAGCTCAGCAGCAAC...................................................................................................................................................

1.00

0.00

1.00

............................TCTGGTGCTGCCCGGCTCAGCCCC......................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGGA....................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGAAG...................................................................................................................................................

1.00

0.00

1.00

....................................................................................GGCTCAGCTCAGCAGTAAC...................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGCCATG..................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGATC...................................................................................................................................................

1.00

0.00

1.00

....................................................................................GGCTCAGCTCAGCAGCAGCA..................................................................................................................................................

1.00

0.00

1.00

............................................................................................................................................................TGCCCTGGCCACTGAAACTGT.........................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGCCCCA..................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGCAG...................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGAA....................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGAAT...................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGCAC...................................................................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGAT....................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................GTAGCCCTGTAGCCCTCTGCTGCCC.........................................................................................

1.00

....................................................................................................................................CACTGTAGCCCTGTACGTT...................................................................................................

1.00

0.00

1.00

...................................................................................GGGCTCAGCTCAGCAGGACT...................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

......................................................................TGCCTGGTTGTGAGGGCTCAGC..............................................................................................................................................................

1.00

...................................................................................GGGCTCAGCTCAGCAGCACCA..................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

0.00

1.00

CGCCTTCACTTCATTCCTCTGCCCCCTCTCTGGTGCTGCCCGGCTCAGATCCCTGCCTTCGCCCCAGGGCTGCCTGGTTGTGAGGGCTCAGCTCAGCAGCCCTGGCAAGGTCACCAGCTGGAGAGTCTTCCTCACTGTAGCCCTGTAGCCCTCTGCTGCCCTGGCCACTGAAACTGTCCTCTCTCTCCTGCCAACCCCAGAAACTCAAGCCAGTGGATTATGAGTACCGAGAAGAAGTCCACTGGGCCAC .................................................................................((((((.....((((..(((..(((..(((...(((..((((....))))...)))..)))..((((....)))).)))..)))..))))....))))))..................................................................... ..............................................................................79....................................................................................................181...................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR040036(GSM532921) G243N. (cervix)	SRR040037(GSM532922) G243T. (cervix)	SRR040040(GSM532925) G612N. (cervix)	SRR029127(GSM416756) A549. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR189787	SRR040039(GSM532924) G531T. (cervix)	SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin)	SRR040038(GSM532923) G531N. (cervix)	TAX577738(Rovira) total RNA. (breast)	SRR040018(GSM532903) G701N. (cervix)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	TAX577590(Rovira) total RNA. (breast)	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR189786	SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver)	SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR040034(GSM532919) G001N. (cervix)	SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin)	SRR029054(GSM402329) MCF7_smallRNAseq. (cell line)	SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin)	TAX577580(Rovira) total RNA. (breast)	SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin)	SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell)	SRR330881(SRX091719) tissue: skin psoriatic uninvolveddisease stat. (skin)	TAX577746(Rovira) total RNA. (breast)	SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin)	SRR040029(GSM532914) G026T. (cervix)	GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain)	SRR040011(GSM532896) G529T. (cervix)	SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin)	SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin)	SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR343333(GSM796036) KSHV (HHV8). (cell line)	GSM416733(GSM416733) HEK293. (cell line)	SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast)	TAX577740(Rovira) total RNA. (breast)	SRR037937(GSM510475) 293cand2. (cell line)	SRR037931(GSM510469) 293GFP. (cell line)	SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR191559(GSM715669) 65genomic small RNA (size selected RNA from t. (breast)	SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR191517(GSM715627) 75genomic small RNA (size selected RNA from t. (breast)	SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	SRR191429(GSM715539) 166genomic small RNA (size selected RNA from . (breast)	GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin)	SRR060169(GSM565979) 5-8F_cytoplasm. (cell line)	SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin)	SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin)	SRR191393(GSM715503) 22genomic small RNA (size selected RNA from t. (breast)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart)	SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin)	SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR553574(SRX182780) source: Heart. (Heart)	SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin)	TAX577743(Rovira) total RNA. (breast)	SRR191394(GSM715504) 23genomic small RNA (size selected RNA from t. (breast)	SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver)	SRR029125(GSM416754) U2OS. (cell line)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin)
................CTCTGCCCCCTCTCTTGG........................................................................................................................................................................................................................	18		2.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................TGGTGCTGCCCGGCTCCA..........................................................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................GTAGCCCTGTAGCCCTCTTATC............................................................................................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................GCTCAGATCCCTGCCTACAT............................................................................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................GTAGCCCTGTAGCCCTCTGGATC...........................................................................................	23		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGGCCACTGAAACTCTT........................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................CTGCCAACCCCAGAAACA.............................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................AGCCCTGGCAAGGTCACTTCC....................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................GCAGGAGAGAGAGGACAG...........................................................	18	3	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.33	-	-
...................................................................................................................................................GCCAGGGCAGCAGAGGGC.....................................................................................	18	3	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.33	-	-	-
...................................................................................................................................................CCAGGGCAGCAGAGGGC......................................................................................	17	9	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.11	-	0.11	0.11