ID: uc010cyj.9
GENE: COASY(10)
chr17:40717774-40717973+


(2)
AGO1.ip 		(2)
AGO2.ip 		(2)
AGO3.ip 		(12)
B-CELL 		(1)
BRAIN 		(3)
BREAST 		(23)
CELL-LINE 		(1)
CERVIX 		(4)
HELA 		(2)
LIVER 		(1)
OTHER 		(3)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GCCACGTGGTGCTCAGCACCTTGTGGGAGCCGCATATCACCCAACGCCAGGTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAGGTGGAGAAAGCCTGGGCCCTCTTGCAGAAGCGCATTCCCAAGACTCATCA
.............................................................((((.((((((((.(((.((((.((((........((((........))))........)))).)))).))).))))))))))))......................................................
............................................................61.......................................................................................150................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................AAGGCCGGGTTGTGGGGAAGGAT................................................................................................................23110.0010.00-----1.00--2.00---2.00----1.00------1.00-------------------1.00------1.00-1.00-
.................................................................AAGGCCGGGTTGTGGGGAAGGA.................................................................................................................22110.0010.00--2.001.00-1.00---3.00-----1.00--1.00---------1.00--------------------------
..............................................................................................................................................................AGCCTGGGCCCTCTTGCAGAAGCGC.................2518.008.008.00------------------------------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGGA.................................................................................................................2317.007.00----1.00---------------2.00-1.00-----------------1.00--1.00------1.00----
................................................................CAAGGCCGGGTTGTGGGGAAG...................................................................................................................2116.006.00---1.00---3.001.00------1.00---------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGAA................................................................................................................2316.0010.00------3.00----3.00-------------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGATT...............................................................................................................2414.0010.00----------3.00-----------------------------------1.00--------
................................................................CAAGGCCGGGTTGTGGGGAAGGT.................................................................................................................2313.002.00---2.00---------------------------1.00-----------------------
....................................................................................................ACTGCCTGACCCTGCCGGG.................................................................................193.000.00-------------------1.00-2.00---------------------------------
.............................................................................................................................................................AAGCCTGGGCCCTCTTGCAGA......................2113.003.00----1.00----------------------------------------1.00--1.00------
............................................................................................................................CTCCCAACATCCTGGCCTGTCT......................................................2212.002.00-----------------------2.00-------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGG..................................................................................................................2212.002.00--1.00---------1.00------------------------------------------
............................................................AGGGCAAGGCCGGGTTGTGGGGATA...................................................................................................................252.000.00--------------2.00----------------------------------------
....................................TCACCCAACGCCAGGAGC..................................................................................................................................................181.000.00-1.00-----------------------------------------------------
...........................................................................................................................................................GAAAGCCTGGGCCCTCTTGCAGAAGCGCATTC.............3211.001.00-------------------------1.00-----------------------------
............................................................................................................................................................AAAGCCTGGGCCCTCTTGCAGAA.....................2311.001.00---------------------------1.00---------------------------
................................................................................................................................CAACATCCTGGCCTGTCTGAAG..................................................2211.001.00-----------------------------------1.00-------------------
...............................................................................................................................................................GCCTGGGCCCTCTTGCGGCT.....................201.000.00---------------------------------------1.00---------------
.........................................................................GTTGTGGGGAAGGAGCTAC............................................................................................................191.000.00-------------------------------------1.00-----------------
................................................................CAAGGCCGGGTTGTGGGGAAT...................................................................................................................211.000.00-----------------------------------------------1.00-------
...............................................................................................................................................................................AGAAGCGCATTCCCAAGACTCAT..2311.001.00-----------------------------------------1.00-------------
................................................................CAAGGCCGGGTTGTGGGGACTGA.................................................................................................................231.000.00----------------------1.00--------------------------------
...................................................................................................................................................................................GCGCATTCCCAAGACTCATCA2111.001.00--------------------------------1.00----------------------
.................................................................AAGGCCGGGTTGTGGGGAA....................................................................................................................1911.001.00-------------------------------------------------1.00-----
..................................................................AGGCCGGGTTGTGGGGAAGGAT................................................................................................................221.000.00----------------------------------------------------1.00--
................................................................CAAGGCCGGGTTGTGGGGAAGGTT................................................................................................................2411.002.00----1.00--------------------------------------------------
.................................................................AAGGCCGGGTTGTGG........................................................................................................................1521.001.00----------------1.00--------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGATAAA.............................................................................................................2611.0010.00------------------------1.00------------------------------
.....................................................................................................CTGCCTGACCCTGCCGG..................................................................................171.000.00-------------------1.00-----------------------------------
.................................................................................................................................................................CTGGGCCCTCTTGCAGAAGCG..................2111.001.00-----------------------------1.00-------------------------
.................................................................AAGGCCGGGTTGTGGGGAAG...................................................................................................................2011.001.00-----1.00-------------------------------------------------
.........................................................................................................................................................................TCTTGCAGAAGCGCATTCCC...........2011.001.00-------------1.00-----------------------------------------
.................................................................AAGGCCGGGTTGTGGGGAAGGAAA...............................................................................................................2411.0010.00------------------1.00------------------------------------
................................................................CAAGGCCGGGTTGTGGGGAAGGATA...............................................................................................................2511.007.00-----1.00-------------------------------------------------
..................................................GTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAG..................................................10011.001.00--------------------------1.00----------------------------
...................................................................................................TACTGCCTGACCCTGCCGGG.................................................................................201.000.00------------------------------------------1.00------------
................................................................CAAGGCCGGGTTGTGGGGATGGA.................................................................................................................231.000.00----1.00--------------------------------------------------
...........................................................................................................................................................GAAAGCCTGGGCCCTCTTGCAGAT.....................241.000.00------------------------------1.00------------------------
............................................................................................................................CTCCCAACATCCTGGCCTGT........................................................2011.001.00--1.00----------------------------------------------------
.................ACCTTGTGGGAGCCGCATATA..................................................................................................................................................................211.000.00-------------1.00-----------------------------------------
..................................................................AGGCCGGGTTGTGGGGAAGGAGTCTC............................................................................................................2611.001.00-----------------1.00-------------------------------------
................................................................................................................................................................CCTGGGCCCTCTTGCAGAAGCGCAT...............2511.001.00------------------------------------1.00------------------
...........................................................................................................................CCTCCCAACATCCTGGCCTGT........................................................2111.001.00--------------------------------------1.00----------------
...............................................................................................................................CCAACATCCTGGCCTGTCTGAT...................................................221.000.00----------------------------------1.00--------------------
........GTGCTCAGCACCTTGTGGGAGCCGCA......................................................................................................................................................................2611.001.00-------------1.00-----------------------------------------

Antisense strand
GCCACGTGGTGCTCAGCACCTTGTGGGAGCCGCATATCACCCAACGCCAGGTTGGTGCCCAGGGCAAGGCCGGGTTGTGGGGAAGGAGTCTCCAGTGGGTACTGCCTGACCCTGCCCTCTCTTCCTCCCAACATCCTGGCCTGTCTGAAGGTGGAGAAAGCCTGGGCCCTCTTGCAGAAGCGCATTCCCAAGACTCATCA
.............................................................((((.((((((((.(((.((((.((((........((((........))))........)))).)))).))).))))))))))))......................................................
............................................................61.......................................................................................150................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
....................................TCACCCAACGCCAGGTGCAG................................................................................................................................................ 201.000.00-1.00-----------------------------------------------------
...........................................................................................................................CCTCCCAACATCCTGGCCTTGA....................................................... 221.000.00-1.00-----------------------------------------------------
..........................................................................................................................AGGCCAGGATGTTGGGAGGA.......................................................... 2011.001.00----------------1.00--------------------------------------
..................................................................AGGCCGGGTTGTGGGGAATGA................................................................................................................. 211.000.00-1.00-----------------------------------------------------
.................................................................................................................................AACATCCTGGCCTGTTGTG.................................................... 191.000.00---------------------------------1.00---------------------
.................................................................................................................TGGGAGGAAGAGAGGGC...................................................................... 1770.140.14------------------------------------------------------0.14