ID: uc010cxu.2_intron_1_0_chr17_40129342_r.5p
GENE: (10)
chr17:40133673-40133922-


(1)
AGO2.ip 		(11)
B-CELL 		(3)
BRAIN 		(4)
BREAST 		(22)
CELL-LINE 		(1)
HEART 		(14)
HELA 		(7)
LIVER 		(3)
OTHER 		(11)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
TCGCTATGACAGTGGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGGTGAGTTGGCTGGGGCAGCCTGGGATGAATTTGACAGCTGTAGAATGTTAGAATTTTTTCCAAAGATGCTCCAGAGGGAGAGTCTATTTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAATGCAGTCAAATGTGGCAGGTTCACAGTGTGCAGTGAGCTCTGAGGAGGCGAGCACTAGC
................................................................................................(((.((.....(((((......((((....)))).((((((((((((((...........))))))))......)))))).))))))).)))..............................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM359177(GSM359177)
hela_nucl_a. (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM359179(GSM359179)
hela_phil_rd2. (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................TTGGGCCAAATCTGATCCCTGGTCCA.......................................................................................26129.0029.0015.00--5.00-------2.00----1.00----2.00------2.00----1.00---------------1.00----------------------------
................................................................................................................................................................CCAAACAGTAATAGACATGGAGTCAAACAAAT..........................................................32128.0028.00----9.009.00------------3.00------3.00----2.00-2.00---------------------------------------------
........................................................................................................................................TTTGGGCCAAATCTGATCCCTGGTCC........................................................................................26116.0016.007.00--4.00-------3.00----1.00----------------1.00--------------------------------------------
..........................................................................................................................................TGGGCCAAATCTGATCCCTGGTCCAA......................................................................................2617.007.005.00--1.00------------1.00-------------------------------------------------------------
............TGGACAGGACCTAGATGAGGAGGG......................................................................................................................................................................................................................2416.006.00-5.00---------------1.00------------------------------------------------------------
.........................................................................................................................................TTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAAT..........................................................5515.005.00-------4.00--------------------------------------------------------1.00-------------
........................................................................................................................................................................................................................GTGTGCAGTGAGCTCTGAGG..............2015.005.00-5.00----------------------------------------------------------------------------
.....ATGACAGTGGACAGGACCT..................................................................................................................................................................................................................................1915.005.00-3.00--------2.00-------------------------------------------------------------------
.........................................................................................................................................TTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAATG.........................................................5614.004.00-------------4.00----------------------------------------------------------------
..................................................GTGAGTTGGCTGGGGCAGCCTGGGATG.............................................................................................................................................................................2713.003.00-----------------------3.00------------------------------------------------------
..........AGTGGACAGGACCTAGATGAGGAG........................................................................................................................................................................................................................2413.003.00-------------------3.00----------------------------------------------------------
........................AGATGAGGAGGGCATGAAT...............................................................................................................................................................................................................1913.003.00-3.00----------------------------------------------------------------------------
......TGACAGTGGACAGGACCT..................................................................................................................................................................................................................................1813.003.00-2.00------1.00---------------------------------------------------------------------
......................................................................................................................................................................AGTAATAGACATGGAGTCAAACAAAT..........................................................2613.003.00-----------------------------------2.00-------------------------1.00----------------
...............................................................................................................................................................................................TGCAGTCAAATGTGGGAGA........................................192.000.00------------------------2.00-----------------------------------------------------
......TGACAGTGGACAGGACCTA.................................................................................................................................................................................................................................1912.002.00--------1.00-1.00-------------------------------------------------------------------
..........................ATGAGGAGGGCATGAATA..............................................................................................................................................................................................................1812.002.00-----------------2.00------------------------------------------------------------
.......GACAGTGGACAGGACCTA.................................................................................................................................................................................................................................1812.002.00---------------------------2.00--------------------------------------------------
...CTATGACAGTGGACAGGACCTAGATGAGGAGGG......................................................................................................................................................................................................................3312.002.00--2.00---------------------------------------------------------------------------
..GCTATGACAGTGGACAGGA.....................................................................................................................................................................................................................................1912.002.00----------1.00--------------------------------------------1.00----------------------
..GCTATGACAGTGGACAGGAC....................................................................................................................................................................................................................................2012.002.00-1.00------------------------------------------------------------1.00---------------
...............ACAGGACCTAGATGAGGAGGGCA....................................................................................................................................................................................................................2312.002.00-------------------------------2.00----------------------------------------------
.......GACAGTGGACAGGACCTAGA...............................................................................................................................................................................................................................2012.002.00-----------------------------2.00------------------------------------------------
...........GTGGACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2412.002.00-2.00----------------------------------------------------------------------------
............................................TGGGTGGTGAGTTGGCTGGGGCAGCCTGGGACG.............................................................................................................................................................................332.000.00------2.00-----------------------------------------------------------------------
..........................................................................................................................................TGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAATG.........................................................5512.002.00-------1.00-----------------------------1.00----------------------------------------
................................AGGGCATGAATATGGGTT........................................................................................................................................................................................................182.000.00----------2.00-------------------------------------------------------------------
.......................TAGATGAGGAGGGCATGAAT...............................................................................................................................................................................................................2012.002.00--------------------2.00---------------------------------------------------------
.CGCTATGACAGTGGACAGG......................................................................................................................................................................................................................................1912.002.00----------------------------------1.00------------------------------1.00------------
............TGGACAGGACCTAGATGAGGAG........................................................................................................................................................................................................................2212.002.00--------------1.00------------------------------1.00--------------------------------
....TATGACAGTGGACAGGACCTAGATGAGGA.........................................................................................................................................................................................................................2912.002.00---------2.00--------------------------------------------------------------------
..........AGTGGACAGGACCTAGATGAGGAGGGCACG..................................................................................................................................................................................................................302.000.00------2.00-----------------------------------------------------------------------
..........................................................................................................................................TGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAAT..........................................................5412.002.00-------1.00----------------------------------------1.00-----------------------------
...........GTGGACAGGACCTAGATGAGGAGGGCA....................................................................................................................................................................................................................2712.002.00--1.00------------1.00--------------------------------------------------------------
.CGCTATGACAGTGGACAGGA.....................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------1.00--------
........................................................................................................................................TTTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAAT..........................................................5611.001.00-------1.00----------------------------------------------------------------------
............TGGACAGGACCTAGATGAGGAGGGCATGAATAT.............................................................................................................................................................................................................3311.001.00--1.00---------------------------------------------------------------------------
..GCTATGACAGTGGACAGGACCTAGAT..............................................................................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------------------
.......GACAGTGGACAGGACCTAGATGAGGAGGGC.....................................................................................................................................................................................................................3011.001.00---------------1.00--------------------------------------------------------------
............TGGACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................TGCAGTCAAATGTGGTAGT........................................191.000.00------------------------1.00-----------------------------------------------------
.....................................................AGTTGGCTGGGGCAGCCTGGGATGAATTTGAC.....................................................................................................................................................................3211.001.00------------1.00-----------------------------------------------------------------
...............................................................................................................................................................TCCAAACAGTAATAGACATGGAGTCA.................................................................2611.001.00---------------------1.00--------------------------------------------------------
....TATGACAGTGGACAGGACCTAGATGA............................................................................................................................................................................................................................2611.001.00---------------------------------------------------------------1.00--------------
.......GACAGTGGACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2811.001.00----------------------------------------------1.00-------------------------------
.................AGGACCTAGATGAGGAGGGCATGAATAT.............................................................................................................................................................................................................2811.001.00----------------------1.00-------------------------------------------------------
.................AGGACCTAGATGAGGAGGGCATGA.................................................................................................................................................................................................................2411.001.00----------------------------------------------------------1.00-------------------
............TGGACAGGACCTAGATGAGG..........................................................................................................................................................................................................................2011.001.00--------------1.00---------------------------------------------------------------
...........GTGGACAGGACCTAGATGA............................................................................................................................................................................................................................1911.001.00--------1.00---------------------------------------------------------------------
............................GAGGAGGGCATGAATGTTT...........................................................................................................................................................................................................191.000.00--------------------------1.00---------------------------------------------------
.........CAGTGGACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2611.001.00--1.00---------------------------------------------------------------------------
........ACAGTGGACAGGACCTAGATGAGGAGGGCACG..................................................................................................................................................................................................................321.000.00------1.00-----------------------------------------------------------------------
..GCTATGACAGTGGACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................3311.001.00--1.00---------------------------------------------------------------------------
.................AGGACCTAGATGAGGAGGG......................................................................................................................................................................................................................1911.001.00--------1.00---------------------------------------------------------------------
................CAGGACCTAGATGAGGAG........................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------1.00------------------
..GCTATGACAGTGGACAGGACCTAGATGAG...........................................................................................................................................................................................................................2911.001.00--1.00---------------------------------------------------------------------------
......TGACAGTGGACAGGACCTT.................................................................................................................................................................................................................................1911.003.00---------------------------------------------------------1.00--------------------
................................................................................................................................................................................................................................TGAGCTCTGAGGAGGCGAGCACC...231.000.00------------1.00-----------------------------------------------------------------
........................................................................................................................................................................TAATAGACATGGAGTCAAACAAAT..........................................................2411.001.00--------------------------1.00---------------------------------------------------
.....................................................................................................AATTTTTTCCAAAGATGCT..................................................................................................................................1911.001.00---------------1.00--------------------------------------------------------------
......................CTAGATGAGGAGGGCATG..................................................................................................................................................................................................................1811.001.00---------1.00--------------------------------------------------------------------
..............................................................................ATTTGACAGCTGTAGAATGTTAGAATTCTG..............................................................................................................................................301.000.00--------------------------------------------------1.00---------------------------
........................................................................................................................................TTTGGGCCAAATCTGATCCCTGGTCCAAACAGTAAT..............................................................................3611.001.00-----------------------------------------1.00------------------------------------
......TGACAGTGGACAGGACCTAGATGAGGAGGGCAT...................................................................................................................................................................................................................3311.001.00--1.00---------------------------------------------------------------------------
..............GACAGGACCTAGATGAGGAGGGCAT...................................................................................................................................................................................................................2511.001.00---------1.00--------------------------------------------------------------------
.................AGGACCTAGATGAGGAGGGCATG..................................................................................................................................................................................................................2311.001.00---------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................GTGTGCAGTGAGCTCTGAGGAGG...........2311.001.00--1.00---------------------------------------------------------------------------
................................................................................................................................................................CCAAACAGTAATAGACATGGAGTCAA................................................................2611.001.001.00-----------------------------------------------------------------------------
..........AGTGGACAGGACCTAGATGAGGAGGGCACGA.................................................................................................................................................................................................................311.000.00------1.00-----------------------------------------------------------------------
...............ACAGGACCTAGATGAGGA.........................................................................................................................................................................................................................1811.001.00--------------1.00---------------------------------------------------------------
......TGACAGTGGACAGGACCTAGATGAGGAGGGC.....................................................................................................................................................................................................................3111.001.00------------1.00-----------------------------------------------------------------
.......................TAGATGAGGAGGGCATGAATATGGGT.........................................................................................................................................................................................................2611.001.00----------------------------------1.00-------------------------------------------
.......................TAGATGAGGAGGGCATGAATT..............................................................................................................................................................................................................2111.002.00------------------------------------1.00-----------------------------------------
..............................GGAGGGCATGAATATGGG..........................................................................................................................................................................................................1821.001.00-----------------------------------------------------------------------0.50-0.50----
..............GACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2111.001.00-----------------------------------------------------1.00------------------------
......................CTAGATGAGGAGGGCATGACT...............................................................................................................................................................................................................211.000.00------------------------------------------1.00-----------------------------------
.......GACAGTGGACAGGACCTAGATGAGGAG........................................................................................................................................................................................................................2711.001.00--------------------1.00---------------------------------------------------------
.........CAGTGGACAGGACCTAGATGAGGAGGACGA...................................................................................................................................................................................................................3011.001.00------------1.00-----------------------------------------------------------------
.........................................................................................................................................TTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAA...........................................................5411.001.00-------1.00----------------------------------------------------------------------
....TATGACAGTGGACAGGACCTAGATG.............................................................................................................................................................................................................................2511.001.00----------------------------------------------------1.00-------------------------
.......................TAGATGAGGAGGGCATGAATTT.............................................................................................................................................................................................................2211.002.00------------------------------------1.00-----------------------------------------
......TGACAGTGGACAGGACCTAGATGAGGAGGGCATGA.................................................................................................................................................................................................................3511.001.00--------------------------------------------------------------------1.00---------
..............GACAGGACCTAGATGAGGA.........................................................................................................................................................................................................................1911.001.00--------1.00---------------------------------------------------------------------
........................AGATGAGGAGGGCATGAATA..............................................................................................................................................................................................................2011.001.00---------------------------------------1.00--------------------------------------
.......................TAGATGAGGAGGGCATGAATA..............................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00------------------------------
...............................................................................................................................................................TCCAAACAGTAATAGACATGGAGTCAAACAAAT..........................................................3311.001.00------------------------------------------------------1.00-----------------------
............TGGACAGGACCTAGATGAGGAGGGCATGAAC...............................................................................................................................................................................................................311.000.00------------1.00-----------------------------------------------------------------
..........................................................................................................................................TGGGCCAAATCTGATCCCTGGTCCAAAC....................................................................................2811.001.00------------------------------------------------------------------1.00-----------
...................................................................................................................................................................AACAGTAATAGACATGGAGTCAAACA.............................................................2611.001.00--------------------------------------------1.00---------------------------------
.....ATGACAGTGGACAGGACCTAGATGAGGAGGGCAT...................................................................................................................................................................................................................3411.001.00--1.00---------------------------------------------------------------------------
.................AGGACCTAGATGAGGAGGGCATGAA................................................................................................................................................................................................................2511.001.00--1.00---------------------------------------------------------------------------
.......GACAGTGGACAGGACCTAGATGAGGAGGGCCGTG.................................................................................................................................................................................................................3411.001.00----------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................AGGTTCACAGTGTGCAGTGAGCTCTGAGGAGG...........3211.001.00------1.00-----------------------------------------------------------------------
........................AGATGAGGAGGGCATGAATATGGG..........................................................................................................................................................................................................2411.001.00---------1.00--------------------------------------------------------------------
..........AGTGGACAGGACCTAGATGAGGAGGGCATGAA................................................................................................................................................................................................................3211.001.00---------------------------------------------------1.00--------------------------
......................CTAGATGAGGAGGGCATGAATAT.............................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------1.00-------
...............ACAGGACCTAGATGAGGAGG.......................................................................................................................................................................................................................2011.001.00--------------1.00---------------------------------------------------------------
............TGGACAGGACCTAGATGAGGAGGGCATGAATA..............................................................................................................................................................................................................3211.001.00--1.00---------------------------------------------------------------------------
..GCTATGACAGTGGACAGGACA...................................................................................................................................................................................................................................2111.002.00--------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................TGCAGTGAGCTCTGAGGAGGCGAGCACCAGC311.000.00------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................GTGTGCAGTGAGCTCTGAGGAGGCGA........2611.001.00------------------------------------------------------------1.00-----------------
...CTATGACAGTGGACAGGACCTAG................................................................................................................................................................................................................................2311.001.00-------------------------------------------1.00----------------------------------
..........AGTGGACAGGACCTAGATGAGGAGGGCAT...................................................................................................................................................................................................................2911.001.00--1.00---------------------------------------------------------------------------
.....ATGACAGTGGACAGGACCTAGATGAGGAGGG......................................................................................................................................................................................................................3111.001.00---------1.00--------------------------------------------------------------------
....TATGACAGTGGACAGGA.....................................................................................................................................................................................................................................1711.001.00----------------------------------------1.00-------------------------------------
..........................................................................................................................................................................................................................GTGCAGTGAGCTCTGAGGAGGCGAGCAC....2811.001.00--1.00---------------------------------------------------------------------------
..................................................GTGAGTTGGCTGGGGCAGCCTGGGATGAAT..........................................................................................................................................................................3011.001.00--------------------------------------------------------1.00---------------------
...............ACAGGACCTAGATGAGGAGGGCATGAATATGGG..........................................................................................................................................................................................................3311.001.00--1.00---------------------------------------------------------------------------
.....ATGACAGTGGACAGGACC...................................................................................................................................................................................................................................1820.500.50---------------------------------------------------------------------------0.50--
.................................................................................TGACAGCTGTAGAATGTT.......................................................................................................................................................1820.500.50------------------------------------------------------------------------0.50-----
..............................................................................................................................................................................................................................AGTGAGCTCTGAGGAGG...........1730.330.33-----------------------------------------------------------------------------0.33
........................AGATGAGGAGGGCATG..................................................................................................................................................................................................................1630.330.33----------------------------------------------------------------------------0.33-
................................AGGGCATGAATATGGGTG........................................................................................................................................................................................................1830.330.33--------0.33---------------------------------------------------------------------

Antisense strand
TCGCTATGACAGTGGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGGTGAGTTGGCTGGGGCAGCCTGGGATGAATTTGACAGCTGTAGAATGTTAGAATTTTTTCCAAAGATGCTCCAGAGGGAGAGTCTATTTGGGCCAAATCTGATCCCTGGTCCAAACAGTAATAGACATGGAGTCAAACAAATGCAGTCAAATGTGGCAGGTTCACAGTGTGCAGTGAGCTCTGAGGAGGCGAGCACTAGC
................................................................................................(((.((.....(((((......((((....)))).((((((((((((((...........))))))))......)))))).))))))).)))..............................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM359177(GSM359177)
hela_nucl_a. (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM359179(GSM359179)
hela_phil_rd2. (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR029126(GSM416755)
143B. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................................................................................................GCAGTGAGCTCTGAGCGAC........... 191.000.00--------------------------------------1.00---------------------------------------
............................................................................................................................................................TATTACTGTTTGGACCA............................................................................. 1720.500.50--------------------------------------------------------------------------0.50---