ID: uc010cxb.2_intron_6_0_chr17_38638669_r.5p
GENE: (6)
chr17:38640536-38640785-


(2)
AGO2.ip
(14)
BRAIN
(6)
BREAST
(3)
CELL-LINE
(4)
CERVIX
(1)
HEART
(5)
LIVER
(1)
OTHER
(7)
SKIN

Sense strand
CCTGGCCCTGAAGGTGCAGGAGGTTCCCGCGTCTGCTCAGAGTCGACCAGGTATGCGTCTGTCTCTGTGCTCACTCAAGGCCTCACTGAGGCAGCGGGGTGTGGTAGGTTCCAGTCCTGGCTCTGGCACTAGCTTTCAGGGTGACATGGCGCCAGTCTTATAACAGCTCCTAGGAGAAGCGTCCACCCCAGTGTTCTCCCCGATGCCCTCCAGCCCCAAGGCACCCTGAAAAACGCCTTTCACAGCAAGC
...................................................................(((((((((...(((((...)))))....))))).))))................................................................................................................................................
..................................................51............................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR040031(GSM532916)
G013T. (cervix)
SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................AGGCAGCGGGGTGTGGTGGAT.............................................................................................................................................2160.000.008.008.008.007.006.00-3.006.00-3.004.003.001.00--1.00-------------------1.00-1.00----------
........................................................................................AGGCAGCGGGGTGTGGTGGGT.............................................................................................................................................2129.000.005.001.004.001.003.00-7.002.00-1.002.002.00--1.00---------------------------------
.........................................................................................................................TCTGGCACTAGCTTTTTTG..............................................................................................................198.000.00-----5.00--1.00----2.00----------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGG...............................................................................................................................................198.000.00----------2.002.001.00--1.00----------------1.00-----1.00---------
........................................................................................AGGCAGCGGGGTGTGGTGGAA.............................................................................................................................................218.000.001.001.001.00---1.001.00-1.00----1.00--------------1.00------------------
........................................................................................AGGCAGCGGGGTGTGGTGGTT.............................................................................................................................................216.000.001.00-1.001.00--3.00-----------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGA..............................................................................................................................................206.000.00--1.001.00--------1.00-1.001.00----------------------------1.00---
........................................................................................AGGCAGCGGGGTGTGGTGGG..............................................................................................................................................205.000.00-2.00-2.00------------1.00-------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGGA.............................................................................................................................................214.000.002.00--1.00----------1.00---------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGAG.............................................................................................................................................214.000.00-1.00-----1.00---1.001.00-----------------------------------
........................................................................................AGGCAGCGGGGTGTGGTTGAT.............................................................................................................................................214.000.001.001.00-------1.00------------1.00-------------------------
......................................................................................TGAGGCAGCGGGGTGTACAG................................................................................................................................................203.000.00-----2.00--1.00---------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTCGGT.............................................................................................................................................213.000.002.001.00----------------------------------------------
......................................................................................TGAGGCAGCGGGGTGTATAG................................................................................................................................................203.000.00-----1.00--1.00----1.00----------------------------------
........................................................................................AGGCAGCGGGGTGTGTA.................................................................................................................................................172.000.00--1.00------1.00--------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGAGT.............................................................................................................................................212.000.00----1.00------1.00------------------------------------
........................................................................................AGGCAGCGGGGTGTGGGGG...............................................................................................................................................192.000.001.00-1.00---------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGAT................................................................................................................................................182.000.00-------1.00----------1.00-----------------------------
.........................................................................................................................TCTGGCACTAGCTTTTGCG..............................................................................................................192.000.00-----1.00--1.00---------------------------------------
.........................................................................................................................TCTGGCACTAGCTTTTCTG..............................................................................................................192.000.00-----2.00------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTTGGT.............................................................................................................................................212.000.00----2.00-------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGC...............................................................................................................................................192.000.00-1.00-------1.00--------------------------------------
......................................................................................TGAGGCAGCGGGGTGTGGGGTT..............................................................................................................................................222.000.00-------------------1.00---1.00------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGGG.............................................................................................................................................212.000.00---1.00---1.00----------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTAGAA.............................................................................................................................................211.000.00----------------------1.00-------------------------
.........................................................................................................................TCTGGCACTAGCTTTTGGG..............................................................................................................191.000.00-----1.00------------------------------------------
...............GCAGGAGGTTCCCGCGT..........................................................................................................................................................................................................................1711.001.00-------------------------------1.00----------------
........................................................................................AGGCAGCGGGGTGTGGGGAG..............................................................................................................................................201.000.00---------1.00--------------------------------------
...........................................................................................................................................................................................................TGCCCTCCAGCCCCAAGGC............................1911.001.00----------------------------------------------1.00-
......................................................................................TGAGGCAGCGGGGTGTGGAGTT..............................................................................................................................................221.000.00-----------------1.00------------------------------
........................................................................................AGGCAGCGGGGTGTGGGGGG..............................................................................................................................................201.000.001.00-----------------------------------------------
......................................................................................TGAGGCAGCGGGGTGTGGAC................................................................................................................................................201.000.00-------------------1.00----------------------------
......................................................................................TGAGGCAGCGGGGTGTGCGGC...............................................................................................................................................211.000.00-1.00----------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGAGGT..............................................................................................................................................201.000.00----1.00-------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGTGT.............................................................................................................................................211.000.00---------1.00--------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGC..............................................................................................................................................201.000.001.00-----------------------------------------------
......................................................................................TGAGGCAGCGGGGTGTTTGG................................................................................................................................................201.000.00-----------------------1.00------------------------
........................................................................................AGGCAGCGGGGTGTGGAG................................................................................................................................................181.000.001.00-----------------------------------------------
.........................................................................................................................TCTGGCACTAGCTTTTGTT..............................................................................................................191.000.00-------------1.00----------------------------------
........................................................................................AGGCAGCGGGGTGTGGAGGG..............................................................................................................................................201.000.00-------1.00----------------------------------------
......................................................................................TGAGGCAGCGGGGTGTGGAGGT..............................................................................................................................................221.000.00------------------------------------------1.00-----
........................................................................................AGGCAGCGGGGTGTGGTGCAA.............................................................................................................................................211.000.00----------------1.00-------------------------------
........................................................................................AGGCAGCGGGGTGTGGTTGG..............................................................................................................................................201.000.00---1.00--------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGCGGA..............................................................................................................................................201.000.00------------1.00-----------------------------------
.........................................................................................................................TCTGGCACTAGCTTTTTTA..............................................................................................................191.000.00-----1.00------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGAAT.............................................................................................................................................211.000.001.00-----------------------------------------------
.....................GGTTCCCGCGTCTGCTCAGAGTCGAC...........................................................................................................................................................................................................2611.001.00---------------------------------1.00--------------
................................CTGCTCAGAGTCGACCAG........................................................................................................................................................................................................1811.001.00----------------------------1.00-------------------
......................................................................................TGAGGCAGCGGGGTGGGTG.................................................................................................................................................191.000.00--------1.00---------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGGT..............................................................................................................................................201.000.00----------1.00-------------------------------------
...........................................................................................................................................................................................................................GGCACCCTGAAAAACGCCT............1911.001.00--------------------1.00---------------------------
......................................................................................TGAGGCAGCGGGGTGTGCGGT...............................................................................................................................................211.000.00-----------------------------------------1.00------
..................................................GTATGCGTCTGTCTCTGA......................................................................................................................................................................................181.000.00-------------------------1.00----------------------
........................................................................................AGGCAGCGGGGTGTGGTAC...............................................................................................................................................191.000.00---1.00--------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGAAA.............................................................................................................................................211.000.00-1.00----------------------------------------------
.........................................................................................................................TCTGGCACTAGCTTTTATG..............................................................................................................191.000.00-----1.00------------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTAGTTAA...........................................................................................................................................231.000.00-1.00----------------------------------------------
......................................................................................TGAGGCAGCGGGGTGTAGAG................................................................................................................................................201.000.00-----1.00------------------------------------------
...................GAGGTTCCCGCGTCTGCTCAGAG................................................................................................................................................................................................................2311.001.00----------------------------------------1.00-------
......................................................................................TGAGGCAGCGGGGTGTGTAGT...............................................................................................................................................211.000.00------1.00-----------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTTGTT.............................................................................................................................................211.000.00----------1.00-------------------------------------
........................................................................................AGGCAGCGGGGTGTGGTGAGA.............................................................................................................................................211.000.00----1.00-------------------------------------------
......................................................................................TGAGGCAGCGGGGTGTGCGG................................................................................................................................................201.000.00-----------------1.00------------------------------
......................................................................................TGAGGCAGCGGGGTGTGTAG................................................................................................................................................201.000.00-------------------------------------------1.00----
........................................................................................AGGCAGCGGGGTGTGGAGTA..............................................................................................................................................201.000.00----1.00-------------------------------------------
.................................TGCTCAGAGTCGACCAG........................................................................................................................................................................................................1711.001.00---------------------------1.00--------------------
...............................................................TCTGTGCTCACTCAAGGC.........................................................................................................................................................................1820.500.50------------------------0.50-----------------------
..................................................GTATGCGTCTGTCTC.........................................................................................................................................................................................1530.330.33-----------------------------------------------0.33

Antisense strand
CCTGGCCCTGAAGGTGCAGGAGGTTCCCGCGTCTGCTCAGAGTCGACCAGGTATGCGTCTGTCTCTGTGCTCACTCAAGGCCTCACTGAGGCAGCGGGGTGTGGTAGGTTCCAGTCCTGGCTCTGGCACTAGCTTTCAGGGTGACATGGCGCCAGTCTTATAACAGCTCCTAGGAGAAGCGTCCACCCCAGTGTTCTCCCCGATGCCCTCCAGCCCCAAGGCACCCTGAAAAACGCCTTTCACAGCAAGC
...................................................................(((((((((...(((((...)))))....))))).))))................................................................................................................................................
..................................................51............................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR040031(GSM532916)
G013T. (cervix)
SRR343335GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR189785SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................................................CCCTCCAGCCCCAAGGAG........................... 188.000.00--------5.00------------2.00--------------1.00-----------
....................................................................................................................................................................................GTCCACCCCAGTGTTCT..................................................... 172.000.00------------------1.00---------------1.00-------------
....................................................................................................................................................................................GTCCACCCCAGTGTTCTC.................................................... 181.000.00--------------------------1.00---------------------
........................................................GTGAGCACAGAGACAGAC................................................................................................................................................................................ 1811.001.00--------------------1.00---------------------------
....................................................................................................................................................................................GTCCACCCCAGTGTTAGA.................................................... 181.000.00------------------------1.00-----------------------
...........................................................................CAAGGCCTCACTGAGGGA............................................................................................................................................................. 181.000.00----------------1.00-------------------------------
..........................................................................................GCAGCGGGGTGTGGTAGTAG............................................................................................................................................ 201.000.00--------1.00---------------------------------------
.....................................CAGAGTCGACCAGGTAGGT.................................................................................................................................................................................................. 191.000.00------------------------------1.00-----------------
............................................................................................................................................................................................................GCCCTCCAGCCCCAATCTG........................... 191.000.00---------------------------------------------1.00--
........................................................GTCTGTCTCTGTGCTAAA................................................................................................................................................................................ 181.000.00---------------------------------------1.00--------