ID: uc010cww.1_intron_0_0_chr17_38375745_f.5p
GENE: WIPF2(1)
chr17:38375695-38375944+


(2)
AGO2.ip 		(14)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(27)
CELL-LINE 		(8)
CERVIX 		(2)
HEART 		(2)
HELA 		(2)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(26)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
AGCCGGAGTGTAGGCGGCAGAGGATTCGCTCCCAGAGCAGCTGCGGCCAGGTCGGAAAGAGGCCGGGGCGGCTGGGTCAGTCGCTGAAATGACCTGCGGACCTGAGTGGGAGGGAAAGTCGCGGGGAGGGGGGCTCGGGGCGGGGCTTGAGAAGAGAGGGGGGCATTAGAGGAGGGGCCGGAGGGGGAGAGGGGTCTTGCGGGTGGGGCCTGAGGGGCGGGGGGCCGGGGGACTGTATCGGAAGAACCTG
...................................................(((....(((.((..((((((((...)))))))).......(((((((.(((........)))....))))))).....)).)))....)))...........................................................................................................
..................................................51..............................................................................................147.....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532877(GSM532877)
G691N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM532876(GSM532876)
G547T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038855(GSM458538)
D10. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR040017(GSM532902)
G645T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.........................................................................................................................................................................................................................................TGTATCGGAAGAACCAG17763.000.00763.00------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTGTATCGGAAGAACCAG181670.001.00666.00------2.00----------2.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAACCAG191258.005.00246.00--2.00--3.004.00---------3.00-------------------------------------------------------------------------------------
..................................................GTCGGAAAGAGGCCGGGG......................................................................................................................................................................................18122.0022.00-16.00--2.00-----------------------------------------1.00-----------------------1.00----1.00-------------1.00-------------
..................................................GTCGGAAAGAGGCCGGGGC.....................................................................................................................................................................................19114.0014.00-6.004.00-4.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAACCA.18110.005.00---4.00--5.00--------1.00---------------------------------------------------------------------------------------
....................................................CGGAAAGAGGCCGGGGC.....................................................................................................................................................................................1719.009.00-9.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGGGGC...........................................................................................................219.000.00-----9.00-------------------------------------------------------------------------------------------------
.............................................................................CAGTCGCTGAAATGACCTG..........................................................................................................................................................1918.008.00-8.00-----------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGGATT................................................................................................................................................................................................................................2516.006.00--------------2.00---------1.00----1.00-------------1.00---------1.00-------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................2416.006.00--2.00-1.00-------------1.00-------------------------------1.00----------------------1.00-----------------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAACC..1715.005.00---3.00--2.00------------------------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................2215.005.00--2.00-------------------------2.00-------------------------------------------------------------1.00------------
..................................................GTCGGAAAGAGGCCGGGGCGG...................................................................................................................................................................................2114.004.00--2.00-2.00--------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGGA..................................................................................................................................................................................................................................2314.004.00----1.00-----------1.00---------------------------------------------------------------1.00--------------1.00-------
.GCCGGAGTGTAGGCGGCAGAG....................................................................................................................................................................................................................................2114.004.00-1.00--1.00-------------------------------1.00-----------------------------------------------1.00------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAACCAGT2013.005.00------1.001.00-------1.00---------------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCAGA.....................................................................................................................................................................................................................................1813.003.00---1.00------------1.00----------------------------------------------------------------------1.00---------------
.................................................................................................................................GGGGCTCGGGGCGGGGT........................................................................................................173.000.00-------------2.00----------------------------1.00------------------------------------------------------------
...................................................TCGGAAAGAGGCCGGGGC.....................................................................................................................................................................................1813.003.00-3.00-----------------------------------------------------------------------------------------------------
.........GTAGGCGGCAGAGGATTTTT.............................................................................................................................................................................................................................203.000.00--3.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAATC..173.000.003.00------------------------------------------------------------------------------------------------------
....GGAGTGTAGGCGGCAGAGGATTCGCT............................................................................................................................................................................................................................2613.003.00-----------1.00--------------------1.00----------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................................ACTGTATCGGAAGAACCAGTC2113.005.00---3.00---------------------------------------------------------------------------------------------------
..........................................GCGGCCAGGTCGGAAAGA..............................................................................................................................................................................................1813.003.00-2.001.00----------------------------------------------------------------------------------------------------
..CCGGAGTGTAGGCGGCAGAGG...................................................................................................................................................................................................................................2113.003.00----3.00--------------------------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCAGAGG...................................................................................................................................................................................................................................2012.002.00--2.00----------------------------------------------------------------------------------------------------
..CCGGAGTGTAGGCGGCAG......................................................................................................................................................................................................................................1812.002.00----------1.00----------------------------------------------------1.00---------------------------------------
.............................................GCCAGGTCGGAAAGAGGC...........................................................................................................................................................................................1812.002.00-----------------------1.00----------------1.00--------------------------------------------------------------
.......................................................................................................................CGCGGGGAGGGGGGCGGGG................................................................................................................192.000.00-------------------------------1.00-----------------1.00-----------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGGATTCG..............................................................................................................................................................................................................................2712.002.00------------1.00-----------------------------------------------1.00------------------------------------------
...CGGAGTGTAGGCGGCAGAGGATTCG..............................................................................................................................................................................................................................2512.002.00-----------1.001.00------------------------------------------------------------------------------------------
.................................................GGTCGGAAAGAGGCCGGGGCG....................................................................................................................................................................................2112.002.00-------------------------2.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGTATCGGAAGAACCA.162.000.00---2.00---------------------------------------------------------------------------------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGGGG............................................................................................................202.000.00-----2.00-------------------------------------------------------------------------------------------------
.............................................GCCAGGTCGGAAAGAGGCCGG........................................................................................................................................................................................2112.002.00---------------1.00---------------------1.00-----------------------------------------------------------------
..CCGGAGTGTAGGCGGCAGAG....................................................................................................................................................................................................................................2012.002.00--------------------------1.00----------------------------------1.00-----------------------------------------
....GGAGTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................2112.002.00---------------------1.00-----------------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................................GACTGTATCGGAAGAATAAG202.000.00------------------------------2.00------------------------------------------------------------------------
.....GAGTGTAGGCGGCAGAGGA..................................................................................................................................................................................................................................1912.002.00----------2.00--------------------------------------------------------------------------------------------
..................................................................................................................................GGGCTCGGGGCGGGGT........................................................................................................162.000.00----------------------------------1.00-------------1.00------------------------------------------------------
..........................................................................................................TGGGAGGGAAAGTCG.................................................................................................................................1531.331.33---------------------------------1.33---------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGGATTC...............................................................................................................................................................................................................................2611.001.00-----------------------------------------1.00-------------------------------------------------------------
.......................................................................................................................CGCGGGGAGGGGGGCTCGGGGCGGGGC........................................................................................................2711.001.00------------------------------------------------------------------------1.00------------------------------
...........................................CGGCCAGGTCGGAAAC...............................................................................................................................................................................................161.000.00-----------------------------------------------------------------------1.00-------------------------------
...CGGAGTGTAGGCGGCAGAGGATTCGCTCCCA........................................................................................................................................................................................................................3111.001.00-----------------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGTATCGGAAGAACCCG171.000.001.00------------------------------------------------------------------------------------------------------
.........................TCGCTCCCAGAGCAGCTGCGGC...........................................................................................................................................................................................................2211.001.00-------------------------------1.00-----------------------------------------------------------------------
............................................................................................................................GGAGGGGGGCTCGGGCGGC...........................................................................................................191.000.00-----1.00-------------------------------------------------------------------------------------------------
..................................................GTCGGAAAGAGGCCGGGGCG....................................................................................................................................................................................2011.001.00----1.00--------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCA.......................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------1.00-------------------------
...........................................CGGCCAGGTCGGAAACG..............................................................................................................................................................................................171.000.00----------------------1.00--------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCA.......................................................................................................................................................................................................................................1611.001.00-------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGCGGC...........................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GGGGACTGTATCGGAAGAACCT.2211.001.00---------------------------------------------------------------------------------1.00---------------------
..........................................GCGGCCAGGTCGGAAAGAG.............................................................................................................................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAG......................................................................................................................................................................................................................................1911.001.00-----------1.00-------------------------------------------------------------------------------------------
........................................................................................ATGACCTGCGGACCTGAGCGGG............................................................................................................................................221.000.00---------1.00---------------------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCAGAGGATTC...............................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------------1.00--------------------------
........TGTAGGCGGCAGAGGATTCGCTCCCCG.......................................................................................................................................................................................................................271.000.00---------1.00---------------------------------------------------------------------------------------------
...CGGAGTGTAGGCGGCAGAG....................................................................................................................................................................................................................................1911.001.00---------------------------1.00---------------------------------------------------------------------------
.....GAGTGTAGGCGGCAGAGGATTCG..............................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------1.00----------------------------------------
........................................................................................................................................................................................................................................CTGTATCGGAAGAACCA.1711.001.00---1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................CGGGGAGGGGGGCTCGGGCAC............................................................................................................211.000.00--1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GGAGGGGGAGAGGGGAAAA....................................................191.000.00----------------------------------------------------------1.00--------------------------------------------
..........................................................................................................TGGGAGGGAAAGTCGGGT..............................................................................................................................1831.001.33----------------------------------------------------------------------------------1.00--------------------
.......................................................AAAGAGGCCGGGGCGGCTGGG..............................................................................................................................................................................2111.001.00------------------------------------------------------------------1.00------------------------------------
...CGGAGTGTAGGCGGCAGAGGATTCGCTCC..........................................................................................................................................................................................................................2911.001.00------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GGGCGGGGGGCCGGGCGAG.................191.000.00-------------------------------------------------------1.00-----------------------------------------------
.........................TCGCTCCCAGAGCAGCTGCGGCCAGGT......................................................................................................................................................................................................2711.001.00---------1.00---------------------------------------------------------------------------------------------
.........................................................AGAGGCCGGGGCGGCGC................................................................................................................................................................................171.000.00------------------------------------------------------------------------------------------------1.00------
..................................................................................................................................GGGCTCGGGGCGGGGTC.......................................................................................................171.000.00--------------------------------------------------------------------------------------------1.00----------
.....GAGTGTAGGCGGCAGAGG...................................................................................................................................................................................................................................1811.001.00----------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGGGGCC..........................................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGG...................................................................................................................................................................................................................................2211.001.00--------------------------1.00----------------------------------------------------------------------------
...........................................................AGGCCGGGGCGGCTGGGAGCT..........................................................................................................................................................................211.000.00---------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGGGAC...........................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------
..............................................CCAGGTCGGAAAGAGGCCGGGGCGGCT.................................................................................................................................................................................2711.001.00----------------1.00--------------------------------------------------------------------------------------
......AGTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................1911.001.00------------------------1.00------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCCGAG....................................................................................................................................................................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------
.GCCGGAGTGTAGGCGGCAGAGAA..................................................................................................................................................................................................................................2311.004.00--------------------------------------------------------1.00----------------------------------------------
.........................................................................................................................CGGGGAGGGGGGCTCGGGGGGC...........................................................................................................221.000.00--------------------------------------------------------------------------------------1.00----------------
...........................................CGGCCAGGTCGGAAACGG.............................................................................................................................................................................................181.000.00---------------------------------------------------------------------1.00---------------------------------
................................CAGAGCAGCTGCGGCCAGGTCGG...................................................................................................................................................................................................2311.001.00------------------------------------------------------------------------------1.00------------------------
..........................................................................................................................GGGGAGGGGGGCTCGGGGGGGG..........................................................................................................221.000.00-----1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GGGACTGTATCGGAAGAAC...1911.001.00----------------------------------------------------1.00--------------------------------------------------
................................................................................................................................GGGGGCTCGGGGCGGGGCTG......................................................................................................201.000.00----------------------------------------------------------------1.00--------------------------------------
...CGGAGTGTAGGCGGCAGAGGATTCGCTC...........................................................................................................................................................................................................................2811.001.00-----------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTGTATCGGAAGAACC..1611.001.00---1.00---------------------------------------------------------------------------------------------------
.....................................................GGAAAGAGGCCGGGGGTT...................................................................................................................................................................................181.000.00---------------------1.00---------------------------------------------------------------------------------
...........................................................................GTCAGTCGCTGAAATGACCTGC.........................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------1.00--------------
..CCGGAGTGTAGGCGGCAGAGGATT................................................................................................................................................................................................................................2411.001.00--------------------1.00----------------------------------------------------------------------------------
......................................................................................................................TCGCGGGGAGGGGGGCGC..................................................................................................................181.000.00-------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................GAGAAGAGAGGGGGGGAGG...................................................................................191.000.00----------------------1.00--------------------------------------------------------------------------------
.....GAGTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................2011.001.00--------------1.00----------------------------------------------------------------------------------------
....................AGGATTCGCTCCCAGAGCAGCTG...............................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------1.00-------------------
.............................................................................................................GAGGGAAAGTCGCGGGGGTCA........................................................................................................................211.000.00------------------------------------------------------1.00------------------------------------------------
........................................................................................................................GCGGGGAGGGGGGCTCGGGGGGC...........................................................................................................231.000.00-------------------------------------------------------------------------------------------1.00-----------
..CCGGAGTGTAGGCGGCATAGG...................................................................................................................................................................................................................................211.000.00----1.00--------------------------------------------------------------------------------------------------
..CCGGAGTGTAGGCGGCAGAGGATTC...............................................................................................................................................................................................................................2511.001.00-----------1.00-------------------------------------------------------------------------------------------
....GGAGTGTAGGCGGCAGAGGATTCG..............................................................................................................................................................................................................................2411.001.00--------------------------------1.00----------------------------------------------------------------------
.......GTGTAGGCGGCAGAGGATTCG..............................................................................................................................................................................................................................2111.001.00---------------------------------------------------1.00---------------------------------------------------
..CCGGAGTGTAGGCGGCAGAGGATTCGC.............................................................................................................................................................................................................................2711.001.00-----------------------------------------------1.00-------------------------------------------------------
...................................................................................................................AAGTCGCGGGGAGGG........................................................................................................................1520.500.50---------0.50---------------------------------------------------------------------------------------------
..CCGGAGTGTAGGCGG.........................................................................................................................................................................................................................................1520.500.50------------0.50------------------------------------------------------------------------------------------
....GGAGTGTAGGCGGCAGAG....................................................................................................................................................................................................................................1820.500.50-------------------------------------------------------------------------------------------------0.50-----
.......GTGTAGGCGGCAGAGGAT.................................................................................................................................................................................................................................1820.500.50--------------------------------------------------------------------------------------------------0.50----

Antisense strand
AGCCGGAGTGTAGGCGGCAGAGGATTCGCTCCCAGAGCAGCTGCGGCCAGGTCGGAAAGAGGCCGGGGCGGCTGGGTCAGTCGCTGAAATGACCTGCGGACCTGAGTGGGAGGGAAAGTCGCGGGGAGGGGGGCTCGGGGCGGGGCTTGAGAAGAGAGGGGGGCATTAGAGGAGGGGCCGGAGGGGGAGAGGGGTCTTGCGGGTGGGGCCTGAGGGGCGGGGGGCCGGGGGACTGTATCGGAAGAACCTG
...................................................(((....(((.((..((((((((...)))))))).......(((((((.(((........)))....))))))).....)).)))....)))...........................................................................................................
..................................................51..............................................................................................147.....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532877(GSM532877)
G691N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM532876(GSM532876)
G547T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038855(GSM458538)
D10. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR040009(GSM532894)
G727T. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR040017(GSM532902)
G645T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
......................................................................................................................................................................................................................GGGCGGGGGGCCGGGGTCCC................ 205.000.00--------3.00--------------------------------------------------1.00--------------1.00----------------------------
.......................................................................................................................................................................................................................GGCGGGGGGCCGGGGGATC................ 191.000.00-------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................GAGGGGGAGAGGGGTGTCC................................................... 191.000.00--------------------1.00----------------------------------------------------------------------------------
............................................................ACTGACCCAGCCGCCCCGGCC......................................................................................................................................................................... 2111.001.00-----------------------------------1.00-------------------------------------------------------------------
...................................................................................................................................GGCTCGGGGCGGGGCTAA..................................................................................................... 181.000.00-------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GGGGCCGGGGGACTGTGG............ 181.000.00----------------------------------------------------------------------------------------------1.00--------
.....................................................................................................................GTCGCGGGGAGGGGGCGG................................................................................................................... 181.000.00--------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................................................AGGGGCGGGGGGCCGAT..................... 171.000.00--------------------------------------------------------------------1.00----------------------------------
.............................................................GCCGGGGCGGCTGGGGA............................................................................................................................................................................ 171.000.00-------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................GCGGGGAGGGGGGCTCTGG............................................................................................................... 191.000.00-----------------------------------------------------------------1.00-------------------------------------
......................................................................................................................................................................................................................GGGCGGGGGGCCGGGGTCCA................ 201.000.00--------1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GGGCGGGGGGCCGGGGTACC................ 201.000.00--------1.00----------------------------------------------------------------------------------------------
..........................GCCGCAGCTGCTCTGGGAGCG........................................................................................................................................................................................................... 2111.001.00---------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................................................................................................GGGGCCGGGGGACTGTGGG........... 191.000.00---------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................................................GGGGCCGGAGGGGGAGAGC.......................................................... 191.000.00---------------------------------------1.00---------------------------------------------------------------
......................................................................................................................................................................................................................CCCCCGGCCCCCCGCCC................... 1750.600.60---------------------------------------------------------------------------------------------------0.200.200.20-
.....................................................................................................................................................................................................................CCCCCGGCCCCCCGCCCC................... 1850.200.20--------------------0.20----------------------------------------------------------------------------------
................................................................................................................................CCCCGCCCCGAGCCCCC......................................................................................................... 1760.170.17------------------------------------------------------------------------------------------------------0.17