| (1) AGO2.ip | (1) B-CELL | (1) BRAIN | (12) BREAST | (6) CELL-LINE | (3) CERVIX | (1) FIBROBLAST | (1) HEART | (1) HELA | (4) LIVER | (5) OTHER | (1) RRP40.ip | (2) SKIN | (4) UTERUS |
| AACTCGCTATAGGAATGTGAAAATGAACTATAATGCACTGATTACTGTAGGTAACAGGAAGTGCTGGGCACAGACCAGCCTGGGCGATATAAAACAGGTCTTTGGTCCCTATATTATTTTAATTATCAGGTGGCGGCATCTGCCCACAATTCCCTTTTGCACGGAGACAAATCTGGAGGGAAATATTGTTCTTTTGCGTCAGTGCAGGGTTGTGTGTGGATACTGACCATGCAGAGGTCACATCTTGACCTTGTTCAAGACTCTCCCAGCTCATCAGACTGAGCAGCACTGGCTTTGTGGTGCTTTCCATTGCCACTGCCCTTTGTTCCTCATCCCAGCTCTTCCGTTTCAGAGCAAAATTTTTTGCTTCTTTTCAGGTCTCAGAGCCACTCGACCAGCTTTCATGTGTCACCGAAGGCAGGCCATC ............................................................................................................................................................................................................................................................................(((((......))))).(((.((((...((((......)))).)))).)))............................................................................................................ .....................................................................................................................................................................................................................................................................262..............................................................327.................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189782 | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189784 | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | TAX577740(Rovira) total RNA. (breast) | TAX577739(Rovira) total RNA. (breast) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577744(Rovira) total RNA. (breast) | TAX577743(Rovira) total RNA. (breast) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR189783 | GSM532880(GSM532880) G659T. (cervix) | SRR040036(GSM532921) G243N. (cervix) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR191589(GSM715699) 69genomic small RNA (size selected RNA from t. (breast) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR191631(GSM715741) 75genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | TAX577579(Rovira) total RNA. (breast) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR191602(GSM715712) 60genomic small RNA (size selected RNA from t. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577453(Rovira) total RNA. (breast) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR040035(GSM532920) G001T. (cervix) | TAX577745(Rovira) total RNA. (breast) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGATGTT............................................................................................................................................. | 20 | 13.00 | 0.00 | 4.00 | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................AGCTCATCAGACTGATGTT............................................................................................................................................. | 19 | 12.00 | 0.00 | 2.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................AGCTCATCAGACTGATGT.............................................................................................................................................. | 18 | 7.00 | 0.00 | 1.00 | - | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGATGT.............................................................................................................................................. | 19 | 4.00 | 0.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGATGCT............................................................................................................................................. | 20 | 2.00 | 0.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGACGTT............................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................AGCTCATCAGACTGAGGTTG............................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGATTTT............................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............AATGTGAAAATGAACTCTG........................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGAGGTGG............................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGAGGTTG............................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGACGAC............................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................GCTCTTCCGTTTCAGG.......................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............AATGTGAAAATGAACCTCG........................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................AGCTCATCAGACTGAGGTGG............................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................................................................CCATTGCCACTGCCCGC........................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ....................................................................................................................TTTTAATTATCAGGTTTCT.................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................................CAGCACTGGCTTTGTGGGA............................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGACGT.............................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGAGG............................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................AGCTCATCAGACTGAGGTT............................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................GCAGCACTGGCTTTGACGC.............................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGATGTC............................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGAGACCG............................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGACG............................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTG.................................................................................................................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| ..........................................................................................................................................................................................................................................................................CAGCTCATCAGACTGCTGT.............................................................................................................................................. | 19 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AACTCGCTATAGGAATGTGAAAATGAACTATAATGCACTGATTACTGTAGGTAACAGGAAGTGCTGGGCACAGACCAGCCTGGGCGATATAAAACAGGTCTTTGGTCCCTATATTATTTTAATTATCAGGTGGCGGCATCTGCCCACAATTCCCTTTTGCACGGAGACAAATCTGGAGGGAAATATTGTTCTTTTGCGTCAGTGCAGGGTTGTGTGTGGATACTGACCATGCAGAGGTCACATCTTGACCTTGTTCAAGACTCTCCCAGCTCATCAGACTGAGCAGCACTGGCTTTGTGGTGCTTTCCATTGCCACTGCCCTTTGTTCCTCATCCCAGCTCTTCCGTTTCAGAGCAAAATTTTTTGCTTCTTTTCAGGTCTCAGAGCCACTCGACCAGCTTTCATGTGTCACCGAAGGCAGGCCATC ............................................................................................................................................................................................................................................................................(((((......))))).(((.((((...((((......)))).)))).)))............................................................................................................ .....................................................................................................................................................................................................................................................................262..............................................................327.................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189782 | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189784 | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | TAX577740(Rovira) total RNA. (breast) | TAX577739(Rovira) total RNA. (breast) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577744(Rovira) total RNA. (breast) | TAX577743(Rovira) total RNA. (breast) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR189783 | GSM532880(GSM532880) G659T. (cervix) | SRR040036(GSM532921) G243N. (cervix) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR191589(GSM715699) 69genomic small RNA (size selected RNA from t. (breast) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR191631(GSM715741) 75genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | TAX577579(Rovira) total RNA. (breast) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR191602(GSM715712) 60genomic small RNA (size selected RNA from t. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577453(Rovira) total RNA. (breast) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR040035(GSM532920) G001T. (cervix) | TAX577745(Rovira) total RNA. (breast) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................AATGAACTATAATGCACG.................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 7.00 | 0.00 | - | 4.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................AATGAACTATAATGCACGC................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................TAACAGGAAGTGCTGTCG...................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................CTCATCCCAGCTCTTCAGCG............................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................GACCAGCCTGGGCGATCTAA............................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................GCCCACAATTCCCTTGGAC........................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................CTCATCCCAGCTCTTAAGG................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................AATGAACTATAATGCACA.................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................ATGAACTATAATGCACCG................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................................................................................CAGAGCCACTCGACCAC............................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........GGAATGTGAAAATGAAACTC............................................................................................................................................................................................................................................................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .........................................................................ACCAGCCTGGGCGATATAG............................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |