ID: uc010cht.1_intron_6_0_chr16_87782416_r.5p
GENE: (2)
chr16:87783643-87783892-


(4)
AGO2.ip
(1)
B-CELL
(1)
BRAIN
(8)
BREAST
(16)
CELL-LINE
(15)
CERVIX
(1)
HEART
(3)
LIVER
(1)
OTHER
(19)
SKIN
(1)
UTERUS

Sense strand
TAGGAGCGTGCTTTTCTCATCCTGGACCCCAGCTACTGCTTAATTTGCAGGTTTGGAGGAAAGACCCCGTGGAGCTTGGTGGTCTCTGCCATTGCTTGTAGCCCAGCAGTCTGTCCAAGCAGCTCTTTCCACAGATGGATGTGTGCCGTCCCCTAAAGACTCTGCCTCCCGCAGTTCTTGGGGGCCCTGAGAGGGAGTGGGCCACGGAGGGCCTCATGTGGAGTAGCCGGTGGTGTCTGATGACCCGTCA
.........................................................(((((((((....)).(((((((((...((((....((.....))...)))).))).))))))...)))))))........................................................................................................................
.......................................................56............................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189784SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189782SRR343336GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189785GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR343337SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040029(GSM532914)
G026T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM532877(GSM532877)
G691N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040030(GSM532915)
G013N. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM532885(GSM532885)
G850N. (cervix)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
GSM532872(GSM532872)
G652T. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444064(SRX128912)
Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM532886(GSM532886)
G850T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................AGACCCCGTGGAGCTT.............................................................................................................................................................................1612061.002061.002061.00------------------------------------------------------------------------
............................................................AAGACCCCGTGGAGCTTT............................................................................................................................................................................1811057.00593.001053.00------1.00--2.00-------1.00------------------------------------------------------
.............................................................AGACCCCGTGGAGCTTT............................................................................................................................................................................171902.002061.00901.00------------------------------------1.00-----------------------------------
............................................................AAGACCCCGTGGAGCTT.............................................................................................................................................................................171593.00593.00590.00---------------1.00----------------1.00-1.00-------------------------------------
............................................................AAGACCCCGTGGAGCT..............................................................................................................................................................................161459.00459.00458.00-------------------------------------1.00----------------------------------
.............................................................AGACCCCGTGGAGCT..............................................................................................................................................................................155158.40158.40158.40------------------------------------------------------------------------
............................................................AAGACCCCGTGGAGCTTTA...........................................................................................................................................................................19158.00593.0026.00-----2.001.00-3.003.001.00--4.00--2.00-1.004.004.003.001.00-------1.00---------------1.00-------1.00-----------------
..............................................................GACCCCGTGGAGCTT.............................................................................................................................................................................15240.5040.5040.50------------------------------------------------------------------------
............................................................AAGACCCCGTGGAGCTTTACT.........................................................................................................................................................................21126.00593.008.00--9.001.00--3.002.001.00-1.00------------1.00------------------------------------------------
.............................................................AGACCCCGTGGAGCTTTA...........................................................................................................................................................................18118.002061.007.00-----------2.00--2.00-1.001.00------2.001.001.00------------------1.00--------------------------
............................................................AAGACCCCGTGGAGCTTTAC..........................................................................................................................................................................20115.00593.003.00-----1.002.002.002.00--------1.001.00----2.00--------------------1.00---------------------------
...........................................................AAAGACCCCGTGGAGCTTTA...........................................................................................................................................................................20114.005.001.00-----1.001.00---1.00-------1.00---1.00------1.001.00--1.00-------1.001.00------1.00-----------1.00--1.00-------
..........................................................GAAAGACCCCGTGGAGCTTTA...........................................................................................................................................................................2114.000.00----1.00-------4.00-1.001.00------1.00--1.002.001.00--1.00--------1.00---------------------------------
...........................................................AAAGACCCCGTGGAGCTTT............................................................................................................................................................................19114.005.007.00-----3.00----2.00-1.00-----1.00-----------------------------------------------------
...........................................................AAAGACCCCGTGGAGCTTTACT.........................................................................................................................................................................22111.005.00--2.00-2.00------1.00----2.00--1.00---2.00--------1.00----------------------------------------
.............................................................AGACCCCGTGGAGCTTTATC.........................................................................................................................................................................20111.002061.00-11.00-----------------------------------------------------------------------
..............................................................GACCCCGTGGAGCTTT............................................................................................................................................................................16210.0040.5010.00------------------------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGCTTTAC..........................................................................................................................................................................2316.001.00--1.00--1.00--1.00----2.00--------------1.00--------------------------------------------
..........................................................GAAAGACCCCGTGGAGCTTTACT.........................................................................................................................................................................236.000.00----4.00---1.00---------------------------------------1.00------------------------
.............................................................AGACCCCGTGGAGCTTTACT.........................................................................................................................................................................2016.002061.005.00-----------------1.00------------------------------------------------------
............................................................AAGACCCCGTGGAGC...............................................................................................................................................................................1536.006.005.00--------------------------------0.33--------------------------------0.33-----0.33
..............................................................GACCCCGTGGAGCTTTA...........................................................................................................................................................................1725.5040.50--------------0.501.00-----0.50--0.50---------0.50-1.50--------------------------------0.50-0.50-
...........................................................AAAGACCCCGTGGAGCTT.............................................................................................................................................................................1815.005.00-----1.001.00------1.00--1.00---1.00----------------------------------------------------
.............................................................AGACCCCGTGGAGCTTATC..........................................................................................................................................................................1915.002061.00-5.00-----------------------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGCTTTA...........................................................................................................................................................................2215.001.00-----------------1.00---------1.00-2.00---------------------1.00---------------------
............................................................AAGACCCCGTGGAGCTTC............................................................................................................................................................................1814.00593.004.00------------------------------------------------------------------------
..........................................................GAAAGACCCCGTGGAGC...............................................................................................................................................................................1724.004.002.50------------1.50-----------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGCTTTACT.........................................................................................................................................................................2413.001.00--1.00-1.001.00-------------------------------------------------------------------
...........................................................AAAGACCCCGTGGAGC...............................................................................................................................................................................1623.003.00-----0.50---------------------------0.50-0.50-------------1.00------------------0.50----
.........................................................GGAAAGACCCCGTGGA.................................................................................................................................................................................1612.002.00-----2.00-------------------------------------------------------------------
.............................................................AGACCCCGTGGAGCTTTAC..........................................................................................................................................................................1912.002061.00---1.00------1.00--------------------------------------------------------------
...........................................................AAAGACCCCGTGGAGCT..............................................................................................................................................................................1712.002.00----------------1.00---------------------------1.00----------------------------
............................................................AAGACCCCGTGGAGCTTA............................................................................................................................................................................1812.00593.002.00------------------------------------------------------------------------
............................................................................TGGTGGTCTCTGCCACACG...........................................................................................................................................................192.000.00--2.00----------------------------------------------------------------------
..........................................................GAAAGACCCCGTGGAGCTTTAC..........................................................................................................................................................................222.000.00--2.00----------------------------------------------------------------------
..............................................................GACCCCGTGGAGCTTTACT.........................................................................................................................................................................1921.5040.50-----0.50--0.50----0.50-----------------------------------------------------------
...........................................................AAAGACCCCGTGGAGCTTAA...........................................................................................................................................................................2011.005.00---------1.00---------------------------------------------------------------
............................................................AAGACCCCGTGGAGCTC.............................................................................................................................................................................1711.00459.001.00------------------------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGCT..............................................................................................................................................................................1911.001.00------------------------------------------------------------1.00------------
...............................................CAGGTTTGGAGGAAAGTG.........................................................................................................................................................................................181.000.00-----------------------------------------------------1.00-------------------
...........................................................AAAGACCCCGTGGAGCTTGACT.........................................................................................................................................................................221.000.00--------1.00----------------------------------------------------------------
..........................................................GAAAGACCCCGTGGAGCT..............................................................................................................................................................................1811.001.00--------------------------------1.00----------------------------------------
.........................................................GGAAAGACCCCGTGGAG................................................................................................................................................................................1711.001.00-----1.00-------------------------------------------------------------------
............................................................AAGACCCCGTGGAGCTCT............................................................................................................................................................................1811.00459.001.00------------------------------------------------------------------------
.............................................................AGACCCCGTGGAGCTTTG...........................................................................................................................................................................1811.002061.00---------------1.00---------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGC...............................................................................................................................................................................1811.001.00-----1.00-------------------------------------------------------------------
........................................................................................................................................................................................................................................GTGTCTGATGACCCGTCT181.000.00----------------------------------------------------------1.00--------------
.........................................................GGAAAGACCCCGTGGAGCTT.............................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------
................................................AGGTTTGGAGGAAAGGCGC.......................................................................................................................................................................................191.000.00-----------------------------------------------------------1.00-------------
.................CATCCTGGACCCCAGCTACTGCTTAA...............................................................................................................................................................................................................2611.001.00--------------------------------------------------------1.00----------------
............................CCAGCTACTGCTTAATTTGAT.........................................................................................................................................................................................................211.000.00---------------------------------------------------------------1.00---------
.............................................................AGACCCCGTGGAGCTTC............................................................................................................................................................................1711.002061.001.00------------------------------------------------------------------------
..........................................................GAAAGACCCCGTGGA.................................................................................................................................................................................1521.001.00------------------------------------------------------------------0.500.50-----
..............................................................GACCCCGTGGAGCTTGACTC........................................................................................................................................................................201.000.00---------------------------------------------------------1.00---------------
...........................................................AAAGACCCCGTGGAGCTTTAC..........................................................................................................................................................................2111.005.00-----------------------------------------1.00-------------------------------
..........................................................GAAAGACCCCGTGGAGCGTTA...........................................................................................................................................................................2121.004.00-----------------1.00-------------------------------------------------------
.........................................................GGAAAGACCCCGTGGAGCTAC............................................................................................................................................................................2111.001.00-------------------------------------------------------------1.00-----------
..........................................................GAAAGACCCCGTGGACCT..............................................................................................................................................................................1821.001.00----------------------------------------------------------------1.00--------
............................................................AAGACCCCGTGGAGCTTACT..........................................................................................................................................................................2011.00593.00------------------1.00------------------------------------------------------
...............................................................................................................TGTCCAAGCAGCTCTGAAA........................................................................................................................191.000.00------------------------------------------------------1.00------------------
.............................................................AGACCCCGTGGAGCTTTC...........................................................................................................................................................................1811.002061.00----------------------------------------1.00--------------------------------
.............................................................AGACCCCGTGGAGCTATC...........................................................................................................................................................................1850.60158.40-0.60-----------------------------------------------------------------------
..............................................................GACCCCGTGGAGCTTTG...........................................................................................................................................................................1720.5040.50---------------0.50---------------------------------------------------------
..............................................................GACCCCGTGGAGCTTTAC..........................................................................................................................................................................1820.5040.50----------------------------------------------------------------------0.50--
............................................................AAGACCCCGTGGAGCCTT............................................................................................................................................................................1830.336.000.33------------------------------------------------------------------------

Antisense strand
TAGGAGCGTGCTTTTCTCATCCTGGACCCCAGCTACTGCTTAATTTGCAGGTTTGGAGGAAAGACCCCGTGGAGCTTGGTGGTCTCTGCCATTGCTTGTAGCCCAGCAGTCTGTCCAAGCAGCTCTTTCCACAGATGGATGTGTGCCGTCCCCTAAAGACTCTGCCTCCCGCAGTTCTTGGGGGCCCTGAGAGGGAGTGGGCCACGGAGGGCCTCATGTGGAGTAGCCGGTGGTGTCTGATGACCCGTCA
.........................................................(((((((((....)).(((((((((...((((....((.....))...)))).))).))))))...)))))))........................................................................................................................
.......................................................56............................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189784SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189782SRR343336GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189785GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR343337SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040029(GSM532914)
G026T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM532877(GSM532877)
G691N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040030(GSM532915)
G013N. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM532885(GSM532885)
G850N. (cervix)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
GSM532872(GSM532872)
G652T. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444064(SRX128912)
Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM532886(GSM532886)
G850T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................GACTCTGCCTCCCGCCAGT.......................................................................... 191.000.00--1.00----------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGGAGTAGCCGGTGCA................ 171.000.00----------------------------------------------------1.00--------------------
......................................................................................................................GCAGCTCTTTCCACAGAAC................................................................................................................. 191.000.00----------------------------1.00--------------------------------------------
..............................................................................................................................TTCCACAGATGGATGTTATT........................................................................................................ 201.000.00--1.00----------------------------------------------------------------------