ID: uc010cfe.2_intron_3_0_chr16_68397770_r.5p
GENE: (3)
chr16:68398454-68398703-


(2)
B-CELL
(1)
BRAIN
(1)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(6)
HEART
(2)
HELA
(1)
KIDNEY
(2)
LIVER
(1)
OTHER
(32)
SKIN

Sense strand
GGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCTGGTGAGGCCGGGCTCCTCCCCACTCAGGTCTCCAGCTCTGGGGAGGCTGTGGGCTCAGTCACAGCTAGACAGACTTCGTTAGGCAGCTCAAAGAATTCCTGCTCCTCGAGAGCATGTGGGCGGGGTATTTAGCAAGACTGATTTCTCTGCCCCCTAGAAATCCTAGAACAGGAAGAGCCCACGCTCTGCCTAGAAAGCTGG
.............................................................................................(((...(((.((((((...((((((...((..((((..(((((((...((...........))..)))).))).))))..)).))))))..)))))).)))...)))..................................................
......................................................................................87...............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532929(GSM532929)
G702N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR189785SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
...............................................................................................................................................................................ATTTAGCAAGACTGAGGCA........................................................1912.000.00-1.00---1.001.00--2.00-1.00-------------1.00--1.001.00-1.00---1.00----------1.00----------
...........................................................................................GAGGCTGTGGGCTCAGAAT............................................................................................................................................197.000.001.00-4.002.00-----------------------------------------------------
............................................................................................AGGCTGTGGGCTCAGAAT............................................................................................................................................186.000.004.00--2.00-----------------------------------------------------
...............................................................................................................................................................................ATTTAGCAAGACTGAGA..........................................................176.000.00-----1.00------2.00--1.00-----------------------1.00-----1.00-----------
...............................................................................................................................................................................ATTTAGCAAGACTGAGC..........................................................175.000.00-2.00----1.00---------------1.00-------------------1.00--------------
...............................................................................................................................................................................ATTTAGCAAGACTGAGGCG........................................................193.000.00-------------------1.00----------------1.001.00-------------------
...............................................................................................................................................................................ATTTAGCAAGACTGAGGAT........................................................192.000.00-1.00------------------------------1.00------------------------
..................................GATAACTGCTCCTCTG........................................................................................................................................................................................................1612.002.00--------2.00------------------------------------------------
......................................................................................................................................................................................................................GAACAGGAAGAGCCCAGCG.................192.000.00-----------1.00---------1.00-----------------------------------
..........................................................................................GGAGGCTGTGGGCTCAGAAT............................................................................................................................................202.000.001.00-1.00------------------------------------------------------
..................TGGAGATTTCAACTTAACT.....................................................................................................................................................................................................................192.000.00--------------------1.00-------------------1.00----------------
......................................................................................................................................................................................................................GAACAGGAAGAGCCCAGCGC................202.000.00-----1.00---------------------------1.00-----------------------
................................TTGATAACTGCTCCTCTG........................................................................................................................................................................................................1812.002.00-------1.00------1.00------------------------------------------
.....................AGATTTCAACTTTGATAACTGCTCCTCTG........................................................................................................................................................................................................2911.001.00-------------1.00-------------------------------------------
.................................TGATAACTGCTCCTCTG........................................................................................................................................................................................................1711.001.00----------------1.00----------------------------------------
..................TGGAGATTTCAACTTAAA......................................................................................................................................................................................................................181.000.00---------------------------1.00-----------------------------
............CGTCTGTGGAGATTTCAACTT.........................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00---------
..............................................................................................................................................................................TATTTAGCAAGACTGAGTCT........................................................2051.000.801.00--------------------------------------------------------
.......................ATTTCAACTTTGATAACTGCTCC............................................................................................................................................................................................................2311.001.00------------------------1.00--------------------------------
............................................................................................AGGCTGTGGGCTCAGGGAC...........................................................................................................................................191.000.00----------------------------------1.00----------------------
.............................................................................................................................................................................GTATTTAGCAAGACTGAGG..........................................................191.000.00--------------------------------------1.00------------------
................................................................................................................................................................................TTTAGCAAGACTGATGCTT.......................................................191.000.00--------------------------1.00------------------------------
...ATTTGACGTCGTCTGTGGAGATTTCA.............................................................................................................................................................................................................................2611.001.00----1.00----------------------------------------------------
.....TTGACGTCGTCTGTGGAGATTTC..............................................................................................................................................................................................................................2311.001.00----1.00----------------------------------------------------
..............................................................................................................................................................................TATTTAGCAAGACTGCGG..........................................................181.000.00--------------------------------------------1.00------------
....TTTGACGTCGTCTGTGGAGATT................................................................................................................................................................................................................................2211.001.00-------1.00-------------------------------------------------
.....................AGATTTCAACTTTGACCGC..................................................................................................................................................................................................................191.000.00-----------------------------------------1.00---------------
..............................................................................................................................................................................TATTTAGCAAGACTGATGCTT.......................................................211.000.001.00--------------------------------------------------------
.............................ACTTTGATAACTGCTGTA...........................................................................................................................................................................................................181.000.00-------------------------------------------1.00-------------
.....TTGACGTCGTCTGTGGAGATTT...............................................................................................................................................................................................................................2211.001.00----1.00----------------------------------------------------
......TGACGTCGTCTGTGGAGAT.................................................................................................................................................................................................................................1911.001.00--------------1.00------------------------------------------
...............................................................................................................................................................................ATTTAGCAAGACTGACGCA........................................................191.000.00-----------------1.00---------------------------------------
..............................................................................................................................................................................TATTTAGCAAGACTGA............................................................1650.800.80---------------0.200.20---------------------------------0.40------
..............................................................................................................................................................................TATTTAGCAAGACTGAGGCA........................................................2050.600.80---------------------------------------------------0.200.200.20---
...................................................................................GCTCTGGGGAGGCTGT.......................................................................................................................................................1660.330.33-------------------------------------------------0.33-------
..............................................................................................................................................................................TATTTAGCAAGACTGAATCT........................................................2050.200.800.20--------------------------------------------------------
......................................................................................................................................................................................................................GAACAGGAAGAGCCC.....................1570.140.14------------------------------------------------------0.14--
.......................................................................................................................................................................................................................AACAGGAAGAGCCCAGCGC................1990.110.11-------------------------------------------------0.11-------
.......................................................................................................................................................................................................................AACAGGAAGAGCCCA....................1590.110.11--------------------------------------------------------0.11
.......................................................................................................................................................................................................................AACAGGAAGAGCCCAGCG.................1890.110.11-------------------------------------------------------0.11-

Antisense strand
GGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACTGCTCCTCTGGTGAGGCCGGGCTCCTCCCCACTCAGGTCTCCAGCTCTGGGGAGGCTGTGGGCTCAGTCACAGCTAGACAGACTTCGTTAGGCAGCTCAAAGAATTCCTGCTCCTCGAGAGCATGTGGGCGGGGTATTTAGCAAGACTGATTTCTCTGCCCCCTAGAAATCCTAGAACAGGAAGAGCCCACGCTCTGCCTAGAAAGCTGG
.............................................................................................(((...(((.((((((...((((((...((..((((..(((((((...((...........))..)))).))).))))..)).))))))..)))))).)))...)))..................................................
......................................................................................87...............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532929(GSM532929)
G702N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR189785SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
......................................................................................................................GCAGGAATTCTTTGAGCTGCCTAACGAAGTCTG................................................................................................... 3312.002.00----------2.00----------------------------------------------
.....................................................................................................................................................................................................................................ACGCTCTGCCTAGAACATT.. 191.000.001.00--------------------------------------------------------
....................................................................................................................TTTGAGCTGCCTAACGAAGTCTGTC............................................................................................................. 2511.001.00-1.00-------------------------------------------------------
..............................................................................................................ACGAAGTCTGTCTAGCTG.......................................................................................................................... 1811.001.00------------------1.00--------------------------------------
...................................................................CCCACTCAGGTCTCCAACC.................................................................................................................................................................... 191.000.00------------------------------1.00--------------------------
......................................................................................................................................GCAGGAATTCTTTGAGC................................................................................................... 1720.500.50------------------------------------------------0.50--------