ID: uc010byl.1_intron_6_0_chr16_28840814_f
GENE: ATXN2L(7)
chr16:28840764-28841228+


(1)
AGO2.ip 		(7)
B-CELL 		(4)
BRAIN 		(12)
BREAST 		(20)
CELL-LINE 		(3)
HEART 		(3)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GAGAACTACGGTGTGAAGACTACCTATGATAGCAGTCTTTCTTCTTATACGTGAGTATCTTGGTGCTCTCCAGGTGATGTGTTGGTGATATGGGGTCACTAAGTGAAGACAGGTTTCCAGGTAGAACATAGTTTTTGCTCATTTTTCTCTGGGTGTCCAGGGTCGCCATCCCTACTCCTACTCTGCCTTGTGGAATTCTTCCCTCAAAGGTTTTAAGCGTCTTAAGTGCTTCTCACATTCCCAGATAAGCCTTGGTGCTCTACCTGGGATGCAGTCGGTGCCCGTTACCCAGATGTTGAAGGGATTAAATACTTCCATGCCTGAACTGGTGATTGGACTTGTTGAAATGTTTTTCCTTTTTTCCTCTTTTGTCCCCTGGCACTGGGATGGTGGTGGTCTGTGGGTGCTGTCTCAGGGTGCCCTTAGAAAAGGACAACTCAGAAGAGTTTCGTCAGCGAGAGCTGC
.............................................................................................................................................................................................................................................................................................................................((((......((.(((.(((......((((....))))......)))......))).)).))))((((((((((..............))))))))))..................................................
...........................................................................................................................................................................................................................................................................................................................316................................................................................................415................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189782SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTCGTCAGCGAGAGCT..20115.0015.0015.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................TGGTGATTGGACTTGTTGAAATG....................................................................................................................23112.0012.00--4.00-----------3.00-----2.00-----------------------1.00------------------------1.001.00----------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAA......................20110.0010.00-10.00-------------------------------------------------------------------------------
....................................CTTTCTTCTTATACGGT............................................................................................................................................................................................................................................................................................................................................................................................................................175.000.00-----5.00---------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAAGAG...................2314.004.00-------------2.00---1.00----------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGAAAAGGACAACTCAGAAGAG...................2514.004.00---1.00------3.00----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................TGGTGATTGGACTTGTTGAATG.....................................................................................................................224.000.00--2.00----------------------------1.00--------------------------1.00----------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTTCGTCAGCGAGAGCT..2113.003.00-3.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGACAACTCAGAAGAG...................2113.003.00--------3.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACAACTCAGAAGAGT..................1912.002.00------1.00-------------------------------------------------------------1.00------------
....................................................................................................AAGTGAAGACAGGTTTCCAGGTA......................................................................................................................................................................................................................................................................................................................................................2312.002.00---2.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACAACTCAGAAGAGTTTC...............2112.002.00------2.00--------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACAACTCAGAAGAGTTTCG..............2312.002.00----2.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................GGTGATTGGACTTGTTGAAATG....................................................................................................................2212.002.00--2.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGACAACTCAGAAGAGTTT................2312.002.00------------------------2.00--------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGACAACTCAGAAGA....................1912.002.00---------1.00-------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGGACAACTCAGAAGAGTTTCG..............2912.002.00------1.00---------------------------1.00----------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGGACAACTCAGAAGAGTT.................2612.002.00-------2.00-------------------------------------------------------------------------
....................................................................................................AAGTGAAGACAGGTTTCCAGGT.......................................................................................................................................................................................................................................................................................................................................................2212.002.00---2.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGAAAAGGACAACTCAGAAGA....................2411.001.00-------------1.00-------------------------------------------------------------------
....................................................................................................AAGTGAAGACAGGTTTCC...........................................................................................................................................................................................................................................................................................................................................................1811.001.00----1.00----------------------------------------------------------------------------
.........................................................................................................AAGACAGGTTTCCAGGTA......................................................................................................................................................................................................................................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGGGTGCTGTCTCAGAA................................................211.000.00--------------------------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................................................TGGTGATTGGACTTGTTGCAAT.....................................................................................................................221.000.00-------------------------------------------------------1.00-------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGGACAACTCTCC.......................181.000.00----------------1.00----------------------------------------------------------------
...................CTACCTATGATAGCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACAACTCAGAAGAGTTTCGT.............2311.001.00-----------------1.00---------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAAGAGTTTCG..............2811.001.00--------------------------------1.00------------------------------------------------
...AACTACGGTGTGAAGACTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------1.00--------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGACAACTCAGAAGAGT..................2011.001.00------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACAACTCAGAAGAGTTTCG..............2211.001.00------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAAGAGTT.................2511.001.00--------------------------------------------------------------------------1.00------
....................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTCTGTGGAG............................................................171.000.00--------------------------1.00------------------------------------------------------
..............................AGCAGTCTTTCTTCTTATACG..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------1.00-----------------------------------------------------------------------
....................................................................................................AAGTGAAGACAGGTTTCCAGGTAG.....................................................................................................................................................................................................................................................................................................................................................2411.001.00----1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................GATTGGACTTGTTGAAATG....................................................................................................................1911.001.00---------------------------------------1.00-----------------------------------------
......................................................GTATCTTGGTGCTCTCCAG........................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------1.00----------------------------------------------------------------
.......................................................................................................................................................................................TGCCTTGTGGAATTCTTC........................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------1.00---------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAGAGTTTCGTCAGCG........2111.001.00--1.00------------------------------------------------------------------------------
...............................................TACGTGAGTATCTTGTA.................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------1.00-------------------------------------------
..GAACTACGGTGTGAAGACTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------1.00-----------------------------------------------------------
............................................................TGGTGCTCTCCAGGTGACAG.................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGACAACTCAGAAGAGTT.................2211.001.00-------------------------1.00-------------------------------------------------------
.......ACGGTGTGAAGACTATTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTAGAAAAGGACAACTCAGAAGA....................2511.001.00---------------------1.00-----------------------------------------------------------
.....CTACGGTGTGAAGACTATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................................................................................................................................................................TTTTTCCTCTTTTGTCTATG........................................................................................201.000.00------------------------------------------------1.00--------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAGTT....................2211.001.00-------1.00-------------------------------------------------------------------------
.........................................................................................................AAGACAGGTTTCCAGGTAGAACA.................................................................................................................................................................................................................................................................................................................................................2311.001.00--1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGACAACTCAGAAGA....................2011.001.00---1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGA.......................1911.001.00-------------------------------------------------------------------1.00-------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGGACAACTCAGAAGAGT..................2311.001.00---------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGGACAACTCAGAAGAGTTT................2511.001.00-----------------------------------------------1.00---------------------------------
....................................................................................................AAGTGAAGACAGGTTTCCAGATA......................................................................................................................................................................................................................................................................................................................................................231.000.00---1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................TACTCTGCCTTGTGGCCGC............................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................................................................................CTGGTGATTGGACTTGTTGAAATGTTTTT...............................................................................................................2911.001.00------------------------------------1.00--------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................TCCTTTTTTCCTCTTTTTAG............................................................................................201.000.00-----------------------------------------------------------------------1.00---------
........................................................................................................................................................................................................................................................................................................................................................................................TGGCACTGGGATGGTGGTGGTC...................................................................2211.001.00---------------------------------------------1.00-----------------------------------
.............................................................................................................................................TTTTTCTCTGGGTGTCCAGGGTCGCC..........................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------------------1.00-----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTCTGTGGGTGCTGTC......................................................2011.001.00-----------------------------------------1.00---------------------------------------
..................................................................................................................................................................................................................................................................................................................................GAACTGGTGATTGGAGGGA............................................................................................................................191.000.00-----------------------1.00---------------------------------------------------------
.....................................................................................................AGTGAAGACAGGTTTCCAGGTAGAA...................................................................................................................................................................................................................................................................................................................................................2511.001.00----1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................AGCGTCTTAAGTGCTCCT........................................................................................................................................................................................................................................181.000.00------------------------------------------1.00--------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAAGA....................2211.001.00---------------------------1.00-----------------------------------------------------
.........................................................................................................................................CTCATTTTTCTCTGGGGGT.....................................................................................................................................................................................................................................................................................................................191.000.00---------------1.00-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................TGGTGATTGGACTTGTTGAAAT.....................................................................................................................2211.001.00-----------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAGGACAACTCAGAAGAGTTTC...............2711.001.00-------1.00-------------------------------------------------------------------------
.......................................................................AGGTGATGTGTTGGTGATA.......................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------1.00------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAAAGGACAACTCAGAAGAGTTTC...............2811.001.00----------------------1.00----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................CTGGGATGGTGGTGGTCTGTGGGTGC..........................................................2611.001.00----------------------------------------1.00----------------------------------------
................................................................................................................................................................................................................................................................................................................................CTGAACTGGTGATTGGACTTG............................................................................................................................2111.001.00------------------------------------------------------------------------1.00--------
...AACTACGGTGTGAAGACTACCTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-------------------------------------------------------------1.00-------------------
..........GTGTGAAGACTACCTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------
.......ACGGTGTGAAGACTACCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------1.00-------------------------------------
..............................................................................................................................................................................................................................................................................................................................GCCTGAACTGGTGATTGG.................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................ACCTGGGATGCAGTCGGTGA........................................................................................................................................................................................201.000.00-----------------------------------------------------1.00---------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAACTCAGAAGAGT..................1720.500.50---------0.50-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................GTGCCCGTTACCCAGA............................................................................................................................................................................1620.500.50-------------------------0.50-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACAACTCAGAAGAGTT.................1920.500.50------------------------------------------------------------------------------0.50--
........................................................................................................................................................................................................................................................................................................................................GTGATTGGACTTGTTGA........................................................................................................................1720.500.50---------------------------------------------------------------------------0.50-----
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGACAACTCAGAAG.....................1720.500.50--------------------------0.50------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGCGAGAGCTGC1620.500.50----------------------------------------------------------------------------0.50----
................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCTGTCTCAGG.................................................1620.500.50-----------------------------------------------------------------------------0.50---
...................................TCTTTCTTCTTATACG..............................................................................................................................................................................................................................................................................................................................................................................................................................1630.330.33---------------0.33-----------------------------------------------------------------
................................................................................................................................................................................................................GGTTTTAAGCGTCTTGTTT..............................................................................................................................................................................................................................................1940.250.25-------------------------------------------------------------------------------0.25-
................................................................................................................................................................................................................GGTTTTAAGCGTCTT..................................................................................................................................................................................................................................................1540.250.25---------------------------------------------------------------------------0.25-----
....................................................GAGTATCTTGGTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................1550.200.20--------------------------------------------------------------------------------0.20

Antisense strand
GAGAACTACGGTGTGAAGACTACCTATGATAGCAGTCTTTCTTCTTATACGTGAGTATCTTGGTGCTCTCCAGGTGATGTGTTGGTGATATGGGGTCACTAAGTGAAGACAGGTTTCCAGGTAGAACATAGTTTTTGCTCATTTTTCTCTGGGTGTCCAGGGTCGCCATCCCTACTCCTACTCTGCCTTGTGGAATTCTTCCCTCAAAGGTTTTAAGCGTCTTAAGTGCTTCTCACATTCCCAGATAAGCCTTGGTGCTCTACCTGGGATGCAGTCGGTGCCCGTTACCCAGATGTTGAAGGGATTAAATACTTCCATGCCTGAACTGGTGATTGGACTTGTTGAAATGTTTTTCCTTTTTTCCTCTTTTGTCCCCTGGCACTGGGATGGTGGTGGTCTGTGGGTGCTGTCTCAGGGTGCCCTTAGAAAAGGACAACTCAGAAGAGTTTCGTCAGCGAGAGCTGC
.............................................................................................................................................................................................................................................................................................................................((((......((.(((.(((......((((....))))......)))......))).)).))))((((((((((..............))))))))))..................................................
...........................................................................................................................................................................................................................................................................................................................316................................................................................................415................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577746(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189782SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................................................................................................................................................................................................................CCCTGGCACTGGGATATTT......................................................................... 194.000.00-----------2.00----------1.00-------1.00--------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................CCCTGGCACTGGGATATT.......................................................................... 183.000.00-----------1.00-----------------1.00--------------------------1.00------------------------
............GTGAAGACTACCTATGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 192.000.00-------------------2.00-------------------------------------------------------------
.......................................................................AGGTGATGTGTTGGTGCG........................................................................................................................................................................................................................................................................................................................................................................................ 182.000.00----------------------------1.00-------------------------------1.00--------------------
..............................................................................................................................................................................................TGGAATTCTTCCCTCGGGT................................................................................................................................................................................................................................................................ 191.000.00-----------------------------------------------------------------1.00---------------
.....................................................................................................................................................................................................................................................................................................................................................................................CCCTGGCACTGGGATAGAT......................................................................... 191.000.00------------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................TTTTTTCCTCTTTTGTCACA......................................................................................... 201.000.00------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................CCCTGGCACTGGGATATGT......................................................................... 191.000.00------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGGGTGCTGTTCTG................................................... 191.000.00----------------------------------------------1.00----------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACAACTCAGAACTA................... 181.000.00---------------1.00-----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................CCCTGGCACTGGGATATAG......................................................................... 191.000.00---------------------------------------------------------------1.00-----------------
................................................................................................................................................TTCTCTGGGTGTCCACAAA.............................................................................................................................................................................................................................................................................................................. 191.000.00----------------------------------------------------1.00----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................CCCCTGGCACTGGGATTTG.......................................................................... 191.000.00------------------1.00--------------------------------------------------------------
...............................................................................................................................................................CACAAGGCAGAGTAGGAGTAGGGATGGCGACCC................................................................................................................................................................................................................................................................................. 3311.001.00--------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................CCCCTGGCACTGGGATGTTC......................................................................... 201.000.00-------------------------------------------------------------------------1.00-------
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCACCCTGAGACAGC............................................ 1650.200.20-------------------------0.20-------------------------------------------------------