ID: uc010bto.1_intron_0_0_chr16_3598219_r.3p
GENE: NLRC3(6)
chr16:3598169-3598418-


(2)
AGO2.ip 		(5)
B-CELL 		(3)
BREAST 		(6)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
UTERUS

Sense strand
GCTTATTCCCCGGCCCTCTGGCCACGGCTAACCAGGGAGTACATGTGACCCTCTGAGAACTAAGTCTGGGCAGGGGTTGCAGGAATTCTCCTGCCACATCCTGCAGGGATTCCACCTCCTGCCATCAGAGCCTCCTTGGCTCTGCCCCAGGGCCACATAGTCACATAGTCACATAGTCACATGTGTCTGTGTCTGCCCAGCCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAG
.....................................................................................................................................................((((.((((((.(((((.((.((...)).))))))).))))))..))))....................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................................................ACATGTGTCTGTGTCTGCCCAGT.................................................2325.000.0021.00-----1.001.00----------------1.00------1.00-
...................................................................................................................................................................................CATGTGTCTGTGTCTGCCCAGA.................................................22112.002.009.00------------1.00------1.00-------1.00----
....................................................................................................................................................................................ATGTGTCTGTGTCTGCCCAGA.................................................218.000.005.003.00-------------------------------
.....................................................................................................................................................................................TGTGTCTGTGTCTGCCCAGA.................................................204.000.003.00----------------1.00---------------
..................................................................................................................................................................................ACATGTGTCTGTGTCTGCCCAGA.................................................234.000.00--2.00-----------------------1.001.00-----
..................................................................................................................................................CCAGGGCCACATAGTCACAT....................................................................................2013.003.003.00--------------------------------
..................................................................................................................................................................................ACATGTGTCTGTGTCTGCCCAGTA................................................243.000.003.00--------------------------------
...................................................................................................................................................CAGGGCCACATAGTCACATAGTC................................................................................2312.002.002.00--------------------------------
...................................................................................................................................................................................CATGTGTCTGTGTCTGCCCAAA.................................................222.000.002.00--------------------------------
...................................................................................................................................................................................CATGTGTCTGTGTCTGCCCAG..................................................2112.002.00----1.00---1.00------------------------
....................................................................................................................................................AGGGCCACATAGTCACATAGTC................................................................................2212.002.002.00--------------------------------
.....................................................................................................................................................................................TGTGTCTGTGTCTGCCCAGT.................................................201.000.00-----------------------1.00---------
..................................................................................................................................................................................ACATGTGTCTGTGTCTGCCCAAT.................................................231.000.001.00--------------------------------
..................................................................................GAATTCTCCTGCCACGCG......................................................................................................................................................181.000.00-----1.00---------------------------
................................................CCCTCTGAGAACTAAGTCTTA.....................................................................................................................................................................................211.000.00---1.00-----------------------------
.............................AACCAGGGAGTACATGTGCAGA.......................................................................................................................................................................................................221.000.00-------------------------1.00-------
.................................................................................................ATCCTGCAGGGATTCAAA.......................................................................................................................................181.000.00---------------------1.00-----------
..............................................................................GCAGGAATTCTCCTGTTG..........................................................................................................................................................181.000.00-------------------1.00-------------
....................................................................................................................................................................................ATGTGTCTGTGTCTGCCCAAA.................................................211.000.001.00--------------------------------
........................................................................................................................................................................................................................ATCCAGGCCGGCGCTGC.................1711.001.00----------------------1.00----------
....................................................................................................................................................................................ATGTGTCTGTGTCTGCCCCGA.................................................211.000.00-1.00-------------------------------
.....................................................................................................................................................................................TGTGTCTGTGTCTGCCCAGTTT...............................................221.000.00--------------1.00------------------
.....................................................................................................................................................................................TGTGTCTGTGTCTGCCCAGAAT...............................................221.000.00----------------1.00----------------
...............................................................................................................................................................................................................TGGAACTTCATCCAGGCCGG.......................2011.001.00-----------------------------1.00---
...................................................................................................................................................CAGGGCCACATAGTCACATAGTA................................................................................231.000.00----------1.00----------------------
...............................................................................................................................................GCCCCAGGGCCACATATTTC.......................................................................................201.000.00------------------1.00--------------
...................................................................................................................................................................................CATGTGTCTGTGTCTGCCCAGTT................................................2311.002.00---------1.00-----------------------
.................................................................................................................................................................................................................GAACTTCATCCAGGCC.........................1650.200.20--------------------------------0.20

Antisense strand
GCTTATTCCCCGGCCCTCTGGCCACGGCTAACCAGGGAGTACATGTGACCCTCTGAGAACTAAGTCTGGGCAGGGGTTGCAGGAATTCTCCTGCCACATCCTGCAGGGATTCCACCTCCTGCCATCAGAGCCTCCTTGGCTCTGCCCCAGGGCCACATAGTCACATAGTCACATAGTCACATGTGTCTGTGTCTGCCCAGCCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAG
.....................................................................................................................................................((((.((((((.(((((.((.((...)).))))))).))))))..))))....................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................TTCTCCTGCCACATCCTAA.................................................................................................................................................. 191.000.00------------------------------1.00--
..............................................................................................................CCAAGGAGGCTCTGATGGCAGGAGGTGGA............................................................................................................... 2911.001.00---------------1.00-----------------
....................................................................................................................................................................................................................................GCTGCCCAGGCCCTGTCAG... 191.000.00------------1.00--------------------
...............................CCAGGGAGTACATGTGCT......................................................................................................................................................................................................... 181.000.00-----------1.00---------------------