ID: uc010bsa.1
GENE: OK/KNS-cl.6(4)
chr16:2012608-2012786-


(1)
AGO1.ip OTHER.mut
(6)
AGO2.ip
(8)
B-CELL
(4)
BRAIN
(15)
BREAST
(42)
CELL-LINE
(1)
CERVIX
(4)
HEART
(6)
HELA
(1)
KIDNEY
(9)
LIVER
(2)
OTHER
(1)
RRP40.ip
(30)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GAGGCTACTGGGGGAACAAGATCGGCAAGCCCCACACTGTCCCTTGCAAGGTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTCCTTCCCTCACCAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCACCCAG
.......................................................(((((((((((.((((((((((((....))))))).((....))...))))).))))..........)))))))..................................................
..................................................51............................................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR343335SRR038857(GSM458540)
D20. (cell line)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................TAGGCTGGTGGCAGGTGATGGG..........................................................................................................22140.0040.0036.003.00-----------------------1.00-------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGG...........................................................................................................21126.0026.0010.009.00----3.00----------------------------------------------------1.00-------------1.00-------1.00----------1.00------------------------------------
...................................................TAGGCTGGTGGCAGGTGATG............................................................................................................20119.0019.001.007.00--2.00------1.001.00------3.00--------2.00-1.00-----------------------------1.00--------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGT.........................................................................................................23115.0040.0011.002.00--1.00-------------------------------------1.00--------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTCCTTCCCTCACCAG..................................................79113.0013.00---6.00----------5.00-----1.00-------------------------------1.00----------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGAT.............................................................................................................19112.0012.00-4.00----1.00-----1.00--------------1.00--------------------------------------------------------1.00-----1.001.00-1.00------1.00----------------------------
...................................................TAGGCTGGTGGCAGGTGATGGT..........................................................................................................22110.0026.003.003.001.00-1.00-1.00----1.00---------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGA.........................................................................................................23110.0040.003.002.00----1.00-----1.00-----------------1.00---------------------------------------1.00----1.00-----------------------------------------------------
....CTACTGGGGGAACAAGATCGGCATC......................................................................................................................................................259.000.00--------9.00------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTCCTTCCCT........................................................7316.006.00---6.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................TCCTGACTCCTTCCCTCACCAGT.................................................2316.005.00-2.00-----2.00------------------------------------------------------1.00----1.00-------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCC........................................................................................................2515.005.00-2.00--1.00-1.00------1.00-------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGTAA........................................................................................................2415.0026.00-5.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATA............................................................................................................2015.0012.00-3.00--1.00-------------------------------------------------------------------------1.00--------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGA..........................................................................................................2215.0026.002.002.00-----------------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................TCCTGACTCCTTCCCTCACCAG..................................................2215.005.00-------5.00-------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGA..............................................................................................................1815.005.001.003.00----------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................GTCTCCTGACTCCTTCCCTCACCAGA.................................................2614.001.00------------------4.00--------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGG...........................................................................................................2214.004.00-2.00---------------------1.00--------------------------------------------------------------1.00------------------------------------------
............GGAACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2734.004.00--3.33----------------------------------0.33------0.33------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGAA........................................................................................................2414.0040.004.00--------------------------------------------------------------------------------------------------------------------------------
..............AACAAGATCGGCAAGCCCCACACTGT...........................................................................................................................................2633.333.33--0.67-------0.67-----0.671.00-----0.33---------------------------------------------------------------------------------------------------------
.............GAACAAGATCGGCAAGCCCCACACTGT...........................................................................................................................................2733.003.00--0.33-------0.33-----2.00------0.33---------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGA...........................................................................................................2113.0019.00-------------2.00-----------------------1.00-------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGA..........................................................................................................2313.004.00----1.00--------------------------------------------------------1.00--------------1.00----------------------------------------------------
.........................................................................................................TCTCCTGACTCCTTCCCTCACCAGA.................................................2513.001.00-----------------------------------------------------------------------1.001.00------------------------1.00-------------------------------
..........................................................................................................................................CGCTGCGGCTCTGTGCTGGTACG..................2313.003.00--1.00-----------------------------------------------------------------------1.00--------------1.00---------------------------------------
..................................................GTAGGCTGGTGGCAGGTG...............................................................................................................1813.003.00-1.00-----------------------------1.00--1.00----------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGAA.........................................................................................................2313.0026.00-2.00--1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGG..........................................................................................................2313.003.00-1.00----1.00------1.00-------------------------------------------------------------------------------------------------------------------
...............ACAAGATCGGCAAGCCCCACACTGTC..........................................................................................................................................2632.002.00------------------------1.33--------0.33--------------------------------------------------------------------0.33--------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGGGA.......................................................................................................2512.0040.002.00--------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGAAA.......................................................................................................2512.0040.002.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTG......................................................................................................2712.002.00----------2.00----------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGAAT.......................................................................................................2512.0040.002.00--------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGAA..........................................................................................................2212.0019.00-2.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTGCTGGTACG..................2712.002.00--2.00------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGATT.......................................................................................................2512.0040.002.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................TCTCCTGACTCCTTCCCTCACCAGT.................................................2512.001.00-----------------------------2.00---------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGAAT.........................................................................................................2312.0019.00-1.00-------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGTATT......................................................................................................2612.0040.00-2.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGAT.........................................................................................................2312.0026.00---------------2.00-----------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGA.........................................................................................................2412.003.00----2.00----------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGG.........................................................................................................2312.0040.00-2.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GTCTCCTGACTCCTTCCCTCACC....................................................2312.002.00-1.00----------------------------------1.00--------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGTAC.......................................................................................................2512.0040.002.00--------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGTT.........................................................................................................2312.0026.00-2.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTGCTGGTT....................252.000.00--------------------------------2.00------------------------------------------------------------------------------------------------
..............AACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2532.002.00----------0.33------------0.67--------------------0.67-----------------------------------------------------------------------------0.33------
..............AACAAGATCGGCAAGCCCCACACT.............................................................................................................................................2431.671.67---------0.33-------------------------0.67--------------------------------------------------------------------0.67------------------------
..............AACAAGATCGGCAAGCCCCACACTGTCCC........................................................................................................................................2931.331.33--1.33------------------------------------------------------------------------------------------------------------------------------
...............ACAAGATCGGCAAGCCCCACACTGT...........................................................................................................................................2531.331.33----------------0.670.33-------------------0.33-------------------------------------------------------------------------------------------
..............AACAAGATCGGCAAGCCCCACACTGTC..........................................................................................................................................2731.331.33--0.33------------------------------0.330.33-----------0.33----------------------------------------------------------------------------------
.......................GGCAAGCCCCACACTGT...........................................................................................................................................1731.331.33------------------------------------------------------------------1.00-----------------------------------------------------0.33--------
........................................................................................................GTCTCCTGACTCCTTCCCTCACCAGT.................................................2611.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCTCTGTGCTGGTACGCCTCATA...........2621.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTCCTTCCCTCACC....................................................7711.001.00--------------------1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTGCTGGTAC...................2611.001.00------------------------------------------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................CGGCTCTGTGCTGGTACGCCTCATA...........251.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................CCCCCGTCTCCTGACTCCTTCCCTCAA.....................................................271.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GACAGGCCGCTGCGGCTCTGTGCTGGTA....................2811.001.00-----------------------------------------------------1.00---------------------------------------------------------------------------
.............GAACAAGATCGGCAAGCCCCACACTGTC..........................................................................................................................................2831.001.00----------0.33-----0.33----------------0.33-----------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTC...............................................................6611.001.00--------------------1.00------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGCCC.......................................................................................................251.000.00--------------------------1.00------------------------------------------------------------------------------------------------------
.......CTGGGGGAACAAGATCGGCAAGCCA...................................................................................................................................................251.000.00---------------------------------------------------------1.00-----------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGAGAT......................................................................................................2711.003.00-1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................ACAGGCCGCTGCGGCTCTGTGCTGGTACG..................2911.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATCGG..........................................................................................................2211.0012.001.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGA..............................................................................................................1911.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATTGGT.........................................................................................................2311.0012.001.00--------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGT...........................................................................................................2111.0019.00-----------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGAT.............................................................................................................2011.001.00------1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................AGGTGACAGGCCGCTGCGGCCC..............................221.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................ACTCCTTCCCTCACCAG..................................................1711.001.00-----------------------------------------------------------------------------------1.00---------------------------------------------
....................................................AGGCTGGTGGCAGGTGAT.............................................................................................................1811.001.00-------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGGC........................................................................................................2511.003.00-------------1.00-------------------------------------------------------------------------------------------------------------------
..................AGATCGGCAAGCCCCACACT.............................................................................................................................................2031.001.00---------------------------------------------0.33----------------------------------------------------------------------0.33---------0.33--
.....TACTGGGGGAACAAGATCGT..........................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------1.00---------------------------
............GGAACAAGATCGGCAAGCCCCACACT.............................................................................................................................................2631.001.00--0.33------0.33------------0.33----------------------------------------------------------------------------------------------------------
....................ATCGGCAAGCCCCACACTGTCCCCTGC....................................................................................................................................271.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGTAT............................................................................................................2031.000.33-1.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CGCTGCGGCTCTGTGCTGGTACGC.................2411.001.00-----------------------------------------------------------------------------------------------1.00---------------------------------
........................................................................................................GTCTCCTGACTCCTTCCCTCACCAG..................................................2511.001.00----------------------------------------------------------------------------------------------1.00----------------------------------
.......CTGGGGGAACAAGATCGGTA........................................................................................................................................................201.000.00------------------------------------------------1.00--------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGT..........................................................................................................2311.004.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGCGGCTCTGTGCTGGA.....................171.000.00----------------------------------------------1.00----------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGT..............................................................................................................1911.003.00-------------------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................CTCCCTCGGGCCCCCGTCTCT.....................................................................211.000.00------------------------------------------------------------------------------------------------1.00--------------------------------
............................................................................................................................................CTGCGGCTCTGTGCTGGTACGC.................2221.001.00-----------------------------------------------------------------------------1.00---------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGAAGGG..........................................................................................................2211.005.001.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................AGGTGACAGGCCGCTGCGGCTCTT............................241.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGAAG............................................................................................................2011.005.00-----------1.00---------------------------------------------------------------------------------------------------------------------
......ACTGGGGGAACAAGATCGGCTTT......................................................................................................................................................231.000.00---------------------------------------------------------------------------------------1.00-----------------------------------------
......ACTGGGGGAACAAGATCGGCAAGCCCCATA...............................................................................................................................................301.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...................GATCGGCAAGCCCCACACT.............................................................................................................................................1931.001.00------------------------------------0.67--------------------------------------------------------------------------------------0.33-----
...................................................TAGGCTGGTGGCAGGTGATGGGTTT.......................................................................................................2511.0040.00-1.00-------------------------------------------------------------------------------------------------------------------------------
........TGGGGGAACAAGATCGGCAAGCG....................................................................................................................................................231.000.00-------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................GGTACGCCTCATCCCTGCACCCA.2321.001.00----------------------------------------------------------------------------------1.00----------------------------------------------
...............................................AAGGTAGGCTGGTGGCAG..................................................................................................................1811.001.00-------------------------------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................................................GCGGCTCTGTGCTGGTACGCCTCAT............2521.001.00----------0.50------0.50---------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CGCTGCGGCTCTGTGCTGGTACGCCTCAT............2911.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCTGCGGCTCTGTGCTGGTACGC.................2321.001.00--------------------------------------0.50------------0.50-----------------------------------------------------------------------------
.........................................................................................................................................CCGCTGCGGCTCTGTGCTGGTACG..................2411.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATT............................................................................................................2011.0012.00--------------------------------------------------------------------1.00------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGGGA..............................................................................................................181.000.00----1.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTGCTGGTACGC.................2811.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................TCTCCTGACTCCTTCCCTCACCAG..................................................2411.001.00-------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATA............................................................................................................2111.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................CTGACTCCTTCCCTCACCAG..................................................2011.001.00--------------------------------------------------------------------------------------------------1.00------------------------------
.........................................................................................................................................CCGCTGCGGCTCTGTGCTGGTA....................2211.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGGGT..............................................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGAAT............................................................................................................2111.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTTT.........................201.000.00--------------------------------------------------------------------------------1.00------------------------------------------------
....................................................................................................................CTTCCCTCACCAGGTGAC.............................................1811.001.00---------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGTT..........................................................................................................2211.0019.00-1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTGCTGGTA....................2511.001.00---------------------------------------------------------------1.00-----------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGAAT........................................................................................................2411.0026.00---------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................TCCTGACTCCTTCCCTCACC....................................................2011.001.00-------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGAAA........................................................................................................2411.0026.00---------------------------1.00-----------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGAAG.........................................................................................................2311.0019.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.......CTGGGGGAACAAGATCGGCAAGCCCCGC................................................................................................................................................281.000.00-----------------1.00---------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGATGGGAT........................................................................................................2411.0040.001.00--------------------------------------------------------------------------------------------------------------------------------
....................................................AGGCTGGTGGCAGGTGATG............................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
......ACTGGGGGAACAAGATCGGCAT.......................................................................................................................................................221.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------
............GGAACAAGATCGGCAATCC....................................................................................................................................................191.000.00--1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CAGGTGACAGGCCGCTGCAGGG...............................221.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGTT.........................................................................................................2411.004.00-1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGTA........................................................................................................2511.003.00-1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGTTGA...........................................................................................................2131.000.33---------------------------------------------------------------------1.00-----------------------------------------------------------
.................................................................................................................................GTGACAGGCCGCTGCGGCTCTGTGCTGGTAC...................3111.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGAAA............................................................................................................2111.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AGGCCGCTGCGGCTCTGTTCTT.......................221.000.00----------------------------------------------------------1.00----------------------------------------------------------------------
.....................................................................................................CCCGTCTCCTGACTCTC.............................................................171.000.00----------------------------------------------------------------------------------------1.00----------------------------------------
....................................................................................................CCCCGTCTCCTGACTCCTTCCCTCACCAG..................................................2911.001.00-----------------------------------------1.00---------------------------------------------------------------------------------------
.................AAGATCGGCAAGCCCCACACTGTCCCCTG.....................................................................................................................................291.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCCGT..................................................................................................3111.001.00-------------------------------------------------------------------------------------1.00-------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCG.......................................................................................................2611.005.00--------------------------1.00------------------------------------------------------------------------------------------------------
...............................................................................................................................AGGTGACAGGCCGCTGCGGCCCTG............................241.000.00--------------------------------------------------------1.00------------------------------------------------------------------------
..........................................................................................................................................CGCTGCGGCTCTGTGCTGGC.....................201.000.00------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTGGT.............................................................................................................1931.000.33--1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CGGCTCTGTGCTGGTACGCCTCA.............2321.001.00---------------------------------------------------------------------------------------------------------0.50-0.50---------------------
..................................................GTAGGCTGGTGGCAGGTGATAA...........................................................................................................2211.001.00------------1.00--------------------------------------------------------------------------------------------------------------------
..................AGATCGGCAAGCCCCACACTGTCCCCTGC....................................................................................................................................291.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCTCTGTGCTGGTACGC.................2021.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGTAA.......................................................................................................2611.003.00-1.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GTCTCCTGACTCCTTCCCTCACCAGAA................................................2711.001.00----------------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGTGATGGGCCTGCC....................................................................................................2911.001.00-----------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................TCCTGACTCCTTCCCTCACCAGTC................................................2411.005.00-------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................CAAGGTAGGCTGGTGGCA...................................................................................................................1811.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
............GGAACAAGATCGGCAAGCCCCACACTGT...........................................................................................................................................2830.670.67--0.67------------------------------------------------------------------------------------------------------------------------------
.............GAACAAGATCGGCAAGCCCCACACT.............................................................................................................................................2530.670.67-----------------0.33---------------------------0.33-----------------------------------------------------------------------------------
...............ACAAGATCGGCAAGCCCCACACTGTCCC........................................................................................................................................2830.670.67---------------------0.67-----------------------------------------------------------------------------------------------------------
................CAAGATCGGCAAGCCCCACACTGTC..........................................................................................................................................2530.670.67---------------------------------------------------------------------------------------------------------------------0.33------0.33----
................CAAGATCGGCAAGCCCCACACTGT...........................................................................................................................................2430.670.67----------0.33-----0.33----------------------------------------------------------------------------------------------------------------
.............GAACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2630.670.67---------------------------------------------0.33---------------------------------------------------------------------------0.33-------
.................AAGATCGGCAAGCCCCACACTGTC..........................................................................................................................................2430.670.67--------------------------------------0.33--------------------------------------------------------------------------------0.33---------
...............................................................................................................................................CGGCTCTGTGCTGGTACGCCTCATCCC.........2720.500.50----------------------------------------------------------------------------------------------------------0.50----------------------
............................................................................................................................................CTGCGGCTCTGTGCTGGTACGCCTCAT............2720.500.50----------------------------------0.50----------------------------------------------------------------------------------------------
................................................................................................................................................GGCTCTGTGCTGGTACGCCTCATCCCTGC......2920.500.50--0.50------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TCTGTGCTGGTACGCCTCATCCC.........2320.500.50-----------------------------------------------0.50---------------------------------------------------------------------------------
...........................................................................................................................................................GGTACGCCTCATCCCTGCA.....1920.500.50-----------------------------------------------------------------------------------------------------------------0.50---------------
...............................................................................................................................................CGGCTCTGTGCTGGTACGCCTCATC...........2520.500.50----------------------------------------------------------------------------------------------------------------0.50----------------
...........................AGCCCCACACTGTCCCTTGCAAGG................................................................................................................................2440.500.50-----------------------------------------0.50---------------------------------------------------------------------------------------
...........................................................................................................................................GCTGCGGCTCTGTGCTGGTACG..................2220.500.50-------------------------------------------0.50-------------------------------------------------------------------------------------
.........................................................................................................................................................CTGGTACGCCTCATCCCTGCAC....2220.500.50-------------------------------------------------------------------------------------------------------------0.50-------------------
................................................................................................................................................GGCTCTGTGCTGGTACGC.................1820.500.50------------------------------------------0.50--------------------------------------------------------------------------------------
...................................................................................................................................................TCTGTGCTGGTACGCCTCATCCCTGC......2620.500.50------------------------------------------------------------------------------------------------------0.50--------------------------
............................................................................................................................................................GTACGCCTCATCCCTGCACC...2020.500.50-------------------------------------------------------------------------------------------------------0.50-------------------------
.............................................................................................................................................................TACGCCTCATCCCTGC......1620.500.50----------------------------------------------------------------0.50----------------------------------------------------------------
.........................................................................................................................................................CTGGTACGCCTCATCCC.........1720.500.50----------------------------------------------------------------0.50----------------------------------------------------------------
..................................................GTAGGCTGGTGGCAGGT................................................................................................................1720.500.50-0.50-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TGTGCTGGTACGCCTCATCCCTGCA.....2520.500.50---------------------------------------------0.50-----------------------------------------------------------------------------------
..............................................................................................................................................GCGGCTCTGTGCTGGTA....................1720.500.50-----------------------------------------------0.50---------------------------------------------------------------------------------
............................................................................................................................................CTGCGGCTCTGTGCTGGTAC...................2020.500.50--------------------------------------------0.50------------------------------------------------------------------------------------
.............................................................................................................................................................TACGCCTCATCCCTGCACC...1920.500.50----------------------------------------0.50----------------------------------------------------------------------------------------
.............................................................................................................................................TGCGGCTCTGTGCTGGTACGC.................2120.500.50--------------------------------------------------------------------------------------------------------------0.50------------------
............................................................................................................................................CTGCGGCTCTGTGCTGGTA....................1920.500.50------------------------------------------------------------------------------------------------------------0.50--------------------
.........................................................................................................................................................CTGGTACGCCTCATC...........1520.500.50----------------------------------------0.50----------------------------------------------------------------------------------------
...............................................................................................................................................CGGCTCTGTGCTGGTACGC.................1920.500.50----------------------------------------0.50----------------------------------------------------------------------------------------
.................................................................................................................................................GCTCTGTGCTGGTACGCCTCATCCC.........2520.500.50---------0.50-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................TGGTACGCCTCATCCCTGC......1920.500.50---------------------------------------------------------------------------------------------------------------0.50-----------------
..........................AAGCCCCACACTGTCCCTTGCA...................................................................................................................................2250.400.40--------------------------------------0.20----------------------------------------------------------------------------------------0.20-
.............................CCCCACACTGTCCCTTGC....................................................................................................................................1850.400.40---------------------------------------------------0.20--------------------------------------------------------------0.20--------------
......................CGGCAAGCCCCACACTGTCCCTTGCAAGG................................................................................................................................2930.330.33-----------------------------------------------------------------------------------------------------------------------------0.33---
..............AACAAGATCGGCAAGCCCCACACTATC..........................................................................................................................................2730.331.67-------------------------------------------------0.33-------------------------------------------------------------------------------
...................GATCGGCAAGCCCCACACTG............................................................................................................................................2030.330.33---------------------------------------------------0.33-----------------------------------------------------------------------------
..........GGGGAACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2930.330.33---------0.33-----------------------------------------------------------------------------------------------------------------------
........TGGGGGAACAAGATCGGCAAGCCCCACACT.............................................................................................................................................3030.330.33----------------0.33----------------------------------------------------------------------------------------------------------------
............GGAACAAGATCGGCAAGCCCCACACTGTCC.........................................................................................................................................3030.330.33-----------------------------------------------0.33---------------------------------------------------------------------------------
...........GGGAACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2830.330.33---------0.33-----------------------------------------------------------------------------------------------------------------------
...................................................TAGGCTGGTGGCAGGTG...............................................................................................................1730.330.33-----------0.33---------------------------------------------------------------------------------------------------------------------
............GGAACAAGATCGGCAAGCCCCACACTGTCCC........................................................................................................................................3130.330.33------------------------------------------------0.33--------------------------------------------------------------------------------
................CAAGATCGGCAAGCCCCACACTGTCCC........................................................................................................................................2730.330.33--------------------------------------0.33------------------------------------------------------------------------------------------
...............ACAAGATCGGCAAGCCCCACACT.............................................................................................................................................2330.330.33--------------------------------------------------0.33------------------------------------------------------------------------------
.................AAGATCGGCAAGCCCCACACTG............................................................................................................................................2230.330.33----------------------------------------------------------------------------------------------------------------------0.33----------
...............ACAAGATCGGCAAGCCCCACACTG............................................................................................................................................2430.330.33----------------0.33----------------------------------------------------------------------------------------------------------------
....................ATCGGCAAGCCCCACACTGT...........................................................................................................................................2030.330.33-------------------------------------------------------------------------------------------------------------------0.33-------------
......................CGGCAAGCCCCACACTGTCCCTTGCAAGGT...............................................................................................................................3030.330.33---------------------------------------0.33-----------------------------------------------------------------------------------------
..............................CCCACACTGTCCCTTGCAAGGT...............................................................................................................................2240.250.25------------------------------------------------------------------------------------------------------------------0.25--------------
..............................................................................................................................................................ACGCCTCATCCCTGC......1540.250.25----0.25----------------------------------------------------------------------------------------------------------------------------
.............................CCCCACACTGTCCCTTGCA...................................................................................................................................1950.200.20--0.20------------------------------------------------------------------------------------------------------------------------------
...........................AGCCCCACACTGTCCCTTGC....................................................................................................................................2050.200.20-----------------0.20---------------------------------------------------------------------------------------------------------------
........................GCAAGCCCCACACTGTCCC........................................................................................................................................1950.200.20-------------------------------------------------------------------------------------------------------0.20-------------------------
.........................CAAGCCCCACACTGTCCCTTG.....................................................................................................................................2150.200.20---------------------------------------0.20-----------------------------------------------------------------------------------------
........................GCAAGCCCCACACTGTCCCT.......................................................................................................................................2050.200.20--------------------------------------0.20------------------------------------------------------------------------------------------
..................................CACTGTCCCTTGCAAG.................................................................................................................................1660.170.17------0.17--------------------------------------------------------------------------------------------------------------------------
..................................CACTGTCCCTTGCAA..................................................................................................................................1570.140.14--------------------------------------------------------------------------------------------------------------------------------0.14
.......................................................CTGGTGGCAGGTGATGG...........................................................................................................1770.140.14-0.14-------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGGCTACTGGGGGAACAAGATCGGCAAGCCCCACACTGTCCCTTGCAAGGTAGGCTGGTGGCAGGTGATGGGCCTGCCGTGGGGCAGGCTCCCTCGGGCCCCCGTCTCCTGACTCCTTCCCTCACCAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCACCCAG
.......................................................(((((((((((.((((((((((((....))))))).((....))...))))).))))..........)))))))..................................................
..................................................51............................................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR343335SRR038857(GSM458540)
D20. (cell line)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR029128(GSM416757)
H520. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................AGATCGGCAAGCCCCACACTGTCCCTC...................................................................................................................................... 272.000.00-----2.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................CTCCTGACTCCTTCCCTCAG..................................................... 201.000.00--------------------------------------------------1.00------------------------------------------------------------------------------
...GCTACTGGGGGAACAA................................................................................................................................................................ 161.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................CGGCCTGTCACCTGGTGAGGGAAG....................................... 2411.001.00---------------------------------------------------------------------------------------------------1.00-----------------------------
............................GCCCCACACTGTCCCTTGCAACTGC.............................................................................................................................. 251.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GGTGACAGGCCGCTGCGGCTCTCTGC......................... 261.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
............................GCCCCACACTGTCCCTTGCAACTG............................................................................................................................... 241.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................AGGTGACAGGCCGCTGCGGCTCGC............................ 241.000.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.............................TGCAAGGGACAGTGTGGGG................................................................................................................................... 1950.600.60-0.60-------------------------------------------------------------------------------------------------------------------------------
......................................................CCATCACCTGCCACCAGC........................................................................................................... 1850.200.20----------------------0.20----------------------------------------------------------------------------------------------------------