ID: uc010bqu.1_intron_0_0_chr16_417783_r.3p
GENE: (3)
chr16:417733-417982-


(1)
AGO2.ip 		(9)
B-CELL 		(9)
BREAST 		(21)
CELL-LINE 		(4)
CERVIX 		(1)
HEART 		(1)
HELA 		(1)
KIDNEY 		(1)
LIVER 		(2)
OTHER 		(15)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
ACCACAGGGATGGGACAGGGGTATGTGTGTGCCTCCGGCATCCCCAAGGGAGGGGGTTCCTCATCTCACCGACAGGACTCTGCCCTCCAGGGCCTCTCATGCCCCGGTTCCTCTGGGCGGCAGCTGCTGATCCCATCCCCGTCGGAACTCCAGCTGCCCTGGGCTTCCCTGGCCTCACCATGAGCCCCTCTCTCCTTCAGGACCCTGTACCCCTGTTCAAGATCTATGTGGCGGAGCTGATCCAGCAGCT
.........................................................................................................((((((..((((((((....))))........))))..)))))).....................................................................................................
................................................................................................97....................................................151.................................................................................................
SizePerfect hitTotal NormPerfect NormSRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189784SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM956925PAZD5SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
.................................................................................................................................ATCCCATCCCCGTCGCCA.......................................................................................................18187.001.0020.0012.009.003.00---2.003.00-2.002.002.001.001.002.002.00--1.00----1.00----1.001.001.00-1.00--1.001.00-1.00-1.001.00-1.00-1.00-1.00-1.00-1.001.001.001.001.00-1.00--1.001.001.001.001.00-
................................................................................................................................GATCCCATCCCCGTCGCCA.......................................................................................................196.000.00------1.00------1.001.00-----------------------1.00------------------1.00--------1.00
.....................................................................................................CCCCGGTTCCTCTGGGCGGCAGCTG............................................................................................................................2513.003.00------3.00------------------------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCGCAA.......................................................................................................1812.001.00-1.00-----1.00-----------------------------------------------------------
..............................................................................................................................................................................................................GTACCCCTGTTCAAGATCTATGTGG...................2512.002.00----2.00--------------------------------------------------------------
.............................................................................................................................................TCGGAACTCCAGCTGGCA...........................................................................................182.000.00----2.00--------------------------------------------------------------
................................................................................................................................GATCCCATCCCCGTCGCCAT......................................................................................................201.000.00------------------------------------------------------------1.00------
.............................................................................................................................................................................................................................ATCTATGTGGCGGAGCTGAT.........2011.001.00--------------------------------1.00----------------------------------
.................................................................................................................................ATCCCATCCCCGTCGCTA.......................................................................................................1811.001.00-----------------------------------------------------------1.00-------
.....................................................................................................................................................................................................................TGTTCAAGATCTATGTGGCG.................2011.001.00---------------------------------------------1.00---------------------
.................................................................................................................................ATCCCATCCCCGTCGGCCCT.....................................................................................................201.000.00---------1.00---------------------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCGCCC.......................................................................................................1811.001.00--1.00----------------------------------------------------------------
..................................................................................................................................................................................................................CCCTGTTCAAGATCTATGTGGCGGAG..............2611.001.00-------------------------------------------1.00-----------------------
........................................................................................................................................................................................................................TCAAGATCTATGTGGCGGAGCTGATCCAGC....3011.001.00-----1.00-------------------------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCGCCAT......................................................................................................1911.001.00---1.00---------------------------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCG..........................................................................................................1511.001.00---------------------------------------------------1.00---------------
................................................................................................................................GATCCCATCCCCGTCGC.........................................................................................................171.000.00----------------------------------------1.00--------------------------
.........................................................................................................................................................................................................................................GAGCTGATCCAGCAGAACT191.000.00------------------1.00------------------------------------------------
........................................................................................................................................................................................................................TCAAGATCTATGTGGCGGAGCTGATC........2611.001.00-----1.00-------------------------------------------------------------
....................................................................................................................................................................................................................................TGGCGGAGCTGATCCAGCAGC.2111.001.00-----------------------------------1.00-------------------------------
......................................................................................................................................................................................................AGGACCCTGTACCCCTGTTCAAGA............................2411.001.00-----------------------1.00-------------------------------------------
...............................................................................................................................................................................................................TACCCCTGTTCAAGATCTATGTGGCGG................2711.001.00-----1.00-------------------------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCGACA.......................................................................................................1811.001.00--1.00----------------------------------------------------------------
................................................................................................................................GATCCCATCCCCGTCTCTA.......................................................................................................191.000.00---------------------1.00---------------------------------------------
.....................................................................................................................................................................................................................TGTTCAAGATCTATGTGGCGGAGCTGATC........2911.001.00-----1.00-------------------------------------------------------------
................................................................................TGCCCTCCAGGGCCTCTGGTT.....................................................................................................................................................211.000.00-------------------------------------------------1.00-----------------
............................................................................................................................................................................................................CTGTACCCCTGTTCAAGATC..........................2011.001.00--------------------1.00----------------------------------------------
.................................................................................................................................ATCCCATCCCCGTCGCCT.......................................................................................................1811.001.00-1.00-----------------------------------------------------------------
..................................................................................................................GGGCGGCAGCTGCTGTC.......................................................................................................................171.000.00----------------------------1.00--------------------------------------

Antisense strand
ACCACAGGGATGGGACAGGGGTATGTGTGTGCCTCCGGCATCCCCAAGGGAGGGGGTTCCTCATCTCACCGACAGGACTCTGCCCTCCAGGGCCTCTCATGCCCCGGTTCCTCTGGGCGGCAGCTGCTGATCCCATCCCCGTCGGAACTCCAGCTGCCCTGGGCTTCCCTGGCCTCACCATGAGCCCCTCTCTCCTTCAGGACCCTGTACCCCTGTTCAAGATCTATGTGGCGGAGCTGATCCAGCAGCT
.........................................................................................................((((((..((((((((....))))........))))..)))))).....................................................................................................
................................................................................................97....................................................151.................................................................................................
SizePerfect hitTotal NormPerfect NormSRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189784SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM956925PAZD5SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040006(GSM532891)
G601N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
......................................................................................................................................................................................................AGGACCCTGTACCCCTGTTCAATC............................ 242.000.00----------------------1.00----1.00---------------------------------------
.....AGGGATGGGACAGGGGTCCC................................................................................................................................................................................................................................. 201.000.00-------------------------1.00-----------------------------------------
.....................................................GGGTTCCTCATCTCAATGG.................................................................................................................................................................................. 191.000.00-----------------------------------------------1.00-------------------
......GGGATGGGACAGGGGGCGC................................................................................................................................................................................................................................. 191.000.00-----------------1.00-------------------------------------------------
..............................................................................................................................................................................................TCTCCTTCAGGACCCTTGGG........................................ 201.000.00----------------------------------1.00--------------------------------
.........................................CCCCAAGGGAGGGGGGA................................................................................................................................................................................................ 171.000.00--------------------------1.00----------------------------------------
..............................................................................TCTGCCCTCCAGGGCCTCGA........................................................................................................................................................ 201.000.00---------1.00---------------------------------------------------------
...........................................................................................CGGGGCATGAGAGGC................................................................................................................................................ 1580.120.12-----------------0.12-------------------------------------------------