| (3) B-CELL | (1) BREAST | (8) CELL-LINE | (4) HELA | (1) LIVER | (1) OTHER | (2) SKIN | (1) XRN.ip |
| CATTCTCACTGCCCTGGCTACGAAAAAGGAAAATCTGGCTTATGGAAAAGGTAATTTTCTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGCATTTCTAGGTGTACTGAGTGGGGAAGAATGTAAGAAACAGTTGATTAACACCCTGTGT ..................................................(((((..((....)).....(((((...........)).)))..........)))))........................................................................ ..................................................51.........................................................110................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR189784 | SRR037936(GSM510474) 293cand1. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR189782 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAATTTTCTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGCATTTCTAG.................................................. | 79 | 1 | 81.00 | 81.00 | 54.00 | 23.00 | - | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAATTTTCTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGAAAA....................................................... | 74 | 5.00 | 0.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................CTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGCATTTCTAG.................................................. | 71 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAATTTTCTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGCATTTCTAA.................................................. | 79 | 4.00 | 0.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................AAAATCTGGCTTATGGAAAAG................................................................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AAAAGGAAAATCTGGCTTATGGA..................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAATTTTCTTCCGACTTTAGTGGC........................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................AAAAGGAAAATCTGGTGTT......................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...................................TGGCTTATGGAAAAGGAGG............................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .................................TCTGGCTTATGGAAAAG................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAATTTTCTTCCGACTTTAGTGGCTTT..................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................TACGAAAAAGGAAAATCTGGCTT.......................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................TTCTTCCGACTTTAGTGGC........................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................AGGTGTACTGAGTGGGGAAGA............................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TGGGGAAGAATGTAAGAAACAGTT................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................TTTTCTTCCGACTTTAGTGGCTTTCTCT................................................................................................. | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ...............................AATCTGGCTTATGGAAAAG................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AAAAGGAAAATCTGGCTTATGGAAAAGGT............................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................AGGAAAATCTGGCTTATGGAAAAG................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGAAAAGGTAATTTTATG...................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ........................................................................................ACATAATCAAATTCACCT......................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ...........................................................................................................................................TGGGGAAGAATGTAAGAAA..................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................AAAATCTGGCTTATGGAAAAGGT............................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................AAAAAGGAAAATCTGGCTTA......................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CATTCTCACTGCCCTGGCTACGAAAAAGGAAAATCTGGCTTATGGAAAAGGTAATTTTCTTCCGACTTTAGTGGCTTTTTCTCTATGCACATAATCAAATTCATTGCTCAGTATATTTTGCATTTCTAGGTGTACTGAGTGGGGAAGAATGTAAGAAACAGTTGATTAACACCCTGTGT ..................................................(((((..((....)).....(((((...........)).)))..........)))))........................................................................ ..................................................51.........................................................110................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR189784 | SRR037936(GSM510474) 293cand1. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR189782 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................TGGAAAAGGTAATTTCATT...................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |