| (3) AGO2.ip | (1) BREAST | (12) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (1) HEART | (1) LIVER | (1) OTHER | (1) SKIN | (1) XRN.ip |
| GGATCAAGCGATCCTCCTACCTCAGCCTCCCAAGTGGCTGGGACCAATAGGTAAGTACCACCTCATCCGGCTAATTTTTTCTATTTTATATACATATGTAATTATATGTGAGATATATATAGATATAGATATATAGATATATATAGATATAGATATATATAGATATAGATATATAGATATATATAGATATGTAACGTATATATACACAAAATTAGCCAGGTGTGGTGGTGTGCAGCTGTAGTCCCAGCTG ..................................................................................................................................................(((((..((((((((..((((....))))..))))))))..))))).......................................................... ..............................................................................................................................................143......................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR553574(SRX182780) source: Heart. (Heart) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189786 | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR040018(GSM532903) G701N. (cervix) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR189783 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | TAX577743(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................TATATATAGATATGTACG....................................................... | 18 | 112.00 | 0.00 | 111.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TAGATATATATAGATTTG........................................................... | 18 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................TATAGATATATATAGACG..................................................................................... | 18 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....AAGCGATCCTCCTACCTCAGCCCCTG........................................................................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................AGCCTCCCAAGTGGCTGGGACCGCAG......................................................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TATATATAGATATGTCCG....................................................... | 18 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....AAGCGATCCTCCTACCTCAGCCTCCCCGG........................................................................................................................................................................................................................ | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......AGCGATCCTCCTACCTCAGCCTCCGAGT........................................................................................................................................................................................................................ | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......AGCGATCCTCCTACCTCAGACCG............................................................................................................................................................................................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................AATTTTTTCTATTTTATTCTA............................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .....AAGCGATCCTCCTACCTCAGCCTTGC........................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATATATATAGATATGTCCG....................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......GCGATCCTCCTACCTATGT................................................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ......................................................................................TATATACATATGTAATTATGA............................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATATATATAGATATGTACG....................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................TAGCCAGGTGTGGTGGTGTTTTG............... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................TCAGCCTCCCAAGTGGCTG.................................................................................................................................................................................................................. | 19 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........CGATCCTCCTACCTCAGCCTCCGAG......................................................................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................TATACATATGTAATTCGTG............................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TATATATAGATATGTACGT...................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .......................................................TACCACCTCATCCGGCTAATT.............................................................................................................................................................................. | 21 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGATCAAGCGATCCTCCTACCTCAGCCTCCCAAGTGGCTGGGACCAATAGGTAAGTACCACCTCATCCGGCTAATTTTTTCTATTTTATATACATATGTAATTATATGTGAGATATATATAGATATAGATATATAGATATATATAGATATAGATATATATAGATATAGATATATAGATATATATAGATATGTAACGTATATATACACAAAATTAGCCAGGTGTGGTGGTGTGCAGCTGTAGTCCCAGCTG ..................................................................................................................................................(((((..((((((((..((((....))))..))))))))..))))).......................................................... ..............................................................................................................................................143......................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR553574(SRX182780) source: Heart. (Heart) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189786 | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR040018(GSM532903) G701N. (cervix) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR189783 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | TAX577743(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................TAGATATATATAGATACG................................................................................... | 18 | 9.00 | 0.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AGATATATATAGATAGCT.......................................................... | 18 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................AGATATATATAGATATGTGG................................................................................................ | 20 | 4.00 | 0.00 | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................ATATATATAGATATAGATATACAG.......................................................................................... | 24 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....AGGTAGGAGGATCGCTTG.................................................................................................................................................................................................................................... | 18 | 0 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATTAGCCAGGTGTGGTGGTGTGAAT............... | 25 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................CCTCAGCCTCCCAAGTGGCTGACG............................................................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................CAGCCTCCCAAGTGGCTGGGACTT............................................................................................................................................................................................................ | 24 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............CCTCCTACCTCAGCCTCCCAGGCT...................................................................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................ATAGATATATAGATAGTAC................................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................ATAGATATATAGATATATTTG................................................................. | 21 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................ATATATAGATATATATAGATACAG.......................................................... | 24 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................CCTCAGCCTCCCAAGTGGCTGGGACCAAAGG........................................................................................................................................................................................................ | 31 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......GCGATCCTCCTACCTCAGCCTCCCAAGTCGG.................................................................................................................................................................................................................... | 31 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................ACCTCAGCCTCCCAAGTGGCTTGC................................................................................................................................................................................................................ | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................TCAGCCTCCCAAGTGGCTGGGACCAAAGCA....................................................................................................................................................................................................... | 30 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................TTAGCCAGGTGTGGTGGTGTGCCT............... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................CTACCTCAGCCTCCCAAGTTGT.................................................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................ACCTCAGCCTCCCAAGTGGCTCGG................................................................................................................................................................................................................ | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................CCTCAGCCTCCCAAGTGGCTATAA............................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........CGATCCTCCTACCTCAATA............................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ...............................................................................................................................................TAGATATAGATATATATACG....................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....GAGGTAGGAGGATCGCTTG................................................................................................................................................................................................................................... | 19 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........TCCTCCTACCTCAGCCTCCCAAGTGGC.................................................................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................AGCTGGGACTACAGCTGC. | 18 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................CAGCCACTTGGGAGGCTGAG.................................................................................................................................................................................................................. | 20 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........CGATCCTCCTACCTCAGCCTAAA........................................................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ..............................................................................................................................................................................................................CAAAATTAGCCAGGTGTGGTAGAT.................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................ACCTCAGCCTCCCAAGTGGCTCGGG............................................................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GAGATATATATAGATACG........................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................CACCTCATCCGGCTAATTTTTAT......................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ........CGATCCTCCTACCTCAAGAG.............................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..ATCAAGCGATCCTCCATGG..................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ........GAGGTAGGAGGATCG................................................................................................................................................................................................................................... | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................TCCCAGCCACTTGGGAGG............................................................................................................................................................................................................... | 18 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................CCTCAGCCTCCCAAGTGGCTGGGACCAGAGG........................................................................................................................................................................................................ | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................CCTCAGCCTCCCAAGTGGCTGGGACCAGTGG........................................................................................................................................................................................................ | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............CCTCCTACCTCAGCCTCCCATTCG...................................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........GGCTGAGGTAGGAGGATCG............................................................................................................................................................................................................................... | 19 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AAATTAGCCAGGTGTGGTGGTGTGACTT.............. | 28 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............TGGTCCCAGCCACTTGGGAGGCTGAGGTAGG............................................................................................................................................................................................................ | 31 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TACATATCTATATATATCTAT......................................................... | 21 | 8 | 0.12 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |