| (1) B-CELL | (4) BREAST | (9) CELL-LINE | (2) HEART | (1) HELA | (4) LIVER | (1) OTHER | (1) RRP40.ip | (8) SKIN | (4) UTERUS |
| CAGGCATGAGCCACTGCGCCCGGCCTAGTTTTGTTTTTAAAGATGAATATACTCTTGCTTAAATTCTAGCTTATCATCTGAAAGAGGGGTGGTCAGTTTGTGTTGGCGGGGCTGACTTTTAATATCTTGTTTCTTGTTCCCAGATTGTAGCACTCCCATAAGAACTCTTTTGTAGACTCTGTTATGTTACCTATTCACAGGTCCTCTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTTGAAAGTACT ....................................................................((.(((.(((((.((((((((((((((((((((....))))).))))))......))))...))))).....))))).)))))................................................................................................... .............................................................62.................................................................................................161....................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577580(Rovira) total RNA. (breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | TAX577453(Rovira) total RNA. (breast) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................TAGCTTATCATCTGATGTT..................................................................................................................................................................... | 19 | 83.00 | 0.00 | 25.00 | 16.00 | 13.00 | 15.00 | 5.00 | 4.00 | - | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................................................................TAGCTTATCATCTGATGT...................................................................................................................................................................... | 18 | 27.00 | 0.00 | 10.00 | 6.00 | 5.00 | 1.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................CAGATTGTAGCACTCTG............................................................................................. | 17 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .......GAGCCACTGCGCCCGGCCTAGG............................................................................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................CCAGATTGTAGCACTCTG............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................GACTATACTCCTCCAGAAATTTTCTC............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGGCGGGGCTGACTTCT.................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............CTGCGCCCGGCCTAGTTTTGTTT...................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................CCTCTTCCTGACTATACTCCTCC......................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TGTGTTGGCGGGGCTGAATC.................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ........AGCCACTGCGCCCGGCCTAGGGTG.......................................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................TAGCTTATCATCTGATTTT..................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TGTAGACTCTGTTATGTTACCTATTCACAG.................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTGTAGACTCTGTTATGTTACCTATTCACAG.................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TAGCTTATCATCTGACGTT..................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................ACTATACTCCTCCAG....................... | 15 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - |
| CAGGCATGAGCCACTGCGCCCGGCCTAGTTTTGTTTTTAAAGATGAATATACTCTTGCTTAAATTCTAGCTTATCATCTGAAAGAGGGGTGGTCAGTTTGTGTTGGCGGGGCTGACTTTTAATATCTTGTTTCTTGTTCCCAGATTGTAGCACTCCCATAAGAACTCTTTTGTAGACTCTGTTATGTTACCTATTCACAGGTCCTCTTCCTGACTATACTCCTCCAGAAATTTTCTCTTTTGAAAGTACT ....................................................................((.(((.(((((.((((((((((((((((((((....))))).))))))......))))...))))).....))))).)))))................................................................................................... .............................................................62.................................................................................................161....................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577580(Rovira) total RNA. (breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | TAX577453(Rovira) total RNA. (breast) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................GGGCTGACTTTTAATTCGA........................................................................................................................... | 19 | 1.25 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......GAGCCACTGCGCCCGGCCTAGTTCCG......................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................CACTCCCATAAGAACATGG................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...........CACTGCGCCCGGCCTAGTTTACTC....................................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........AGCCACTGCGCCCGGCCTAACGC........................................................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................GTATAGTCAGGAAGAG............................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| .........................................................................................................................................................................................................................AAAATTTCTGGAGGAGT................ | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AAACTAGGCCGGGCGCAGTGGCTCATGCC........................................................................................................................................................................................................................... | 29 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TATTAAAAGTCAGCCC.............................................................................................................................. | 16 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | 0.17 | - | - |
| ............................................................................................................ATTAAAAGTCAGCCC............................................................................................................................... | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - |
| ............................................................................................................GGGCTGACTTTTAATTCG............................................................................................................................ | 18 | 0.12 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |