ID: uc010bdn.1_intron_5_0_chr15_43964912_r
GENE: PPIP5K1(21)
chr15:43964862-43965169-


(1)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(11)
CELL-LINE 		(3)
CERVIX 		(2)
LIVER 		(2)
OTHER 		(10)
SKIN

Sense strand
GACCTGCAGAGAACCCACGAGGATGAGTCTGTCAACAAGCTGCATCCCCTGTGAGGGAGGGCTGGGAGGGGTGTTGGATGGAGGGAGGGGCATGTCAGGGAGCCTTGGGGGAATCAAAGCTGGGACAGCCTGGGGAACCAAGAATAGACAAGATTTTGGGATGGAAAGGAGAGAAGTCTTTGAGGTGGGAGGAGGGAGTTTGCAGAAGGGTGGGAACAGGGTTAACTGACTGTGTGAGTGATTTAGCTGTTATCTCAGGTACTCCCGAGGCGTGCTCTCCCCAGGTCGCCACGTTCGAACGCGTCTCT
.............................................................((((((.....(((((((..........(((.(((((..(((((((.....(((....(((.((...(((......(((.....((((....((((.........)))).....))))......))).....)))...)).)))...))).....)))))))..)))))))).......))))))).....))))))..................................................
........................................................57.......................................................................................................................................................................................................258................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR040031(GSM532916)
G013T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGGA......................................................1942.000.0023.006.005.004.00-3.00--1.00----------------------------
...........................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGGAT.....................................................204.000.001.002.001.00----------------------------------
............................................................................................................................................................................................................................................AGTGATTTAGCTGTTGGA......................................................182.000.001.001.00-----------------------------------
....................................................GAGGGAGGGCTGGGA.................................................................................................................................................................................................................................................1502.002.00------------1.00-----1.00------------------
...........................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGG.......................................................182.000.002.00------------------------------------
.............................................................................................................................................................................................................................................GTGATTTAGCTGTTATCTCAGA.................................................221.000.00-----------------1.00-------------------
.............................................................CTGGGAGGGGTGTTGGGGTT...................................................................................................................................................................................................................................201.000.00----1.00--------------------------------
.............................................................................................................................................................................................................................TTAACTGACTGTGTGAGTGATTTAG..............................................................2521.001.00-------0.50-----------------0.50-----------
...................................................................................................................................................................................................................GGGAACAGGGTTAACATCG..............................................................................191.000.00-----------1.00-------------------------
.........................................................AGGGCTGGGAGGGGTGGTC........................................................................................................................................................................................................................................191.000.00---------1.00---------------------------
....................................................................................................................................................................................TGAGGTGGGAGGAGGGATAC............................................................................................................201.000.00--------------1.00----------------------
...................................................................................................................AAAGCTGGGACAGCCTGGGGAACCAAGAACAG.................................................................................................................................................................321.000.00----1.00--------------------------------
............................................................................................................................................................TGGGATGGAAAGGAGAGATTAC..................................................................................................................................221.000.00------1.00------------------------------
..................................................GTGAGGGAGGGCTGGGCTA...............................................................................................................................................................................................................................................191.000.00----------1.00--------------------------
....................................................................................................................................................................................TGAGGTGGGAGGAGGTAT..............................................................................................................181.000.00---------------------1.00---------------
................................................................................................................................................................................................................................ACTGACTGTGTGAGTGTGTG................................................................201.000.00----1.00--------------------------------
....................................................................................................................................................................................................................................ACTGTGTGAGTGATTTAGCTGTTATCCCAG..................................................301.000.00----------------1.00--------------------
...........................................................................................................................................................................................GGAGGAGGGAGTTTGTTCT......................................................................................................191.000.00-------------1.00-----------------------
....................................................................................................................................................................................TGAGGTGGGAGGAGGGAGTTCGC.........................................................................................................231.000.00----1.00--------------------------------
........................................................GAGGGCTGGGAGGGGTAGGG........................................................................................................................................................................................................................................201.000.00----------------------1.00--------------
....................................................GAGGGAGGGCTGGGAGGGCAA...........................................................................................................................................................................................................................................211.000.00-------------------1.00-----------------
............................................................................................................................................................................................................................GTTAACTGACTGTGTGAGT.....................................................................1920.500.50-----------------------------0.50-------
..........................................CATCCCCTGTGAGGGAGGGCTG....................................................................................................................................................................................................................................................2220.500.50-------------------------------0.50-----
...................................................................................................................................................................................................................................GACTGTGTGAGTGATTTAG..............................................................1920.500.50-------0.50-----------------------------
.................................AACAAGCTGCATCCCCT..................................................................................................................................................................................................................................................................1720.500.50----------------------------------0.50--
.................................................................................................................................................................................................GGGAGTTTGCAGAAGGGTGGGA.............................................................................................2220.500.50---------------------------------0.50---
............ACCCACGAGGATGAGTCTGTCAACA...............................................................................................................................................................................................................................................................................2520.500.50--------------------------0.50----------
........................................................................................................................................................................................................................CAGGGTTAACTGACTGTGTGAGTGAT..................................................................2620.500.50---------------------------0.50---------
..........GAACCCACGAGGATGAGTCTGTCAACAAGCTGC.........................................................................................................................................................................................................................................................................3320.500.50----------------------------0.50--------
.........................................................................................................................................................................................................................AGGGTTAACTGACTGTGTGAGTG....................................................................2320.500.50-------0.50-----------------------------
...............CACGAGGATGAGTCTGTCAACAAGCTGCA........................................................................................................................................................................................................................................................................2920.500.50--------------------0.50----------------
..............................................................................................................................................................................................................................................................TCAGGTACTCCCGAGGCGT...................................1920.500.50------------------------------0.50------
.......AGAGAACCCACGAGGATGAGTC.......................................................................................................................................................................................................................................................................................2220.500.50--------------------0.50----------------
...............CACGAGGATGAGTCTGTC...................................................................................................................................................................................................................................................................................1820.500.50------0.50------------------------------
.............................................................................................................................................................................................................................TTAACTGACTGTGTGAGTGATTTAGCTG...........................................................2820.500.50--------------------------------0.50----
.............CCCACGAGGATGAGTCTGTC...................................................................................................................................................................................................................................................................................2020.500.50------0.50------------------------------
..........................................................................................................................................................................................................................................................TATCTCAGGTACTCC...........................................1570.140.14------------------------------------0.14

Antisense strand
GACCTGCAGAGAACCCACGAGGATGAGTCTGTCAACAAGCTGCATCCCCTGTGAGGGAGGGCTGGGAGGGGTGTTGGATGGAGGGAGGGGCATGTCAGGGAGCCTTGGGGGAATCAAAGCTGGGACAGCCTGGGGAACCAAGAATAGACAAGATTTTGGGATGGAAAGGAGAGAAGTCTTTGAGGTGGGAGGAGGGAGTTTGCAGAAGGGTGGGAACAGGGTTAACTGACTGTGTGAGTGATTTAGCTGTTATCTCAGGTACTCCCGAGGCGTGCTCTCCCCAGGTCGCCACGTTCGAACGCGTCTCT
.............................................................((((((.....(((((((..........(((.(((((..(((((((.....(((....(((.((...(((......(((.....((((....((((.........)))).....))))......))).....)))...)).)))...))).....)))))))..)))))))).......))))))).....))))))..................................................
........................................................57.......................................................................................................................................................................................................258................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR040031(GSM532916)
G013T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................................................................................................................................................GCGTGCTCTCCCCAGGGT..................... 181.000.00---------------1.00---------------------
......................................................GGGAGGGCTGGGAGGGGCC........................................................................................................................................................................................................................................... 191.000.00-----------------------1.00-------------
...........................................................................................................................................................................................................................................GAGTGATTTAGCTGTCA........................................................ 171.000.001.00------------------------------------
......................................................................CATGCCCCTCCCTCCATCCAACAC...................................................................................................................................................................................................................... 2420.500.50------------------------0.50------------
............................................................................................................................................................................................................CCCTGTTCCCACCCTTC....................................................................................... 1730.330.33-----------------------------------0.33-