uc010bbs.1_intron_10_0_chr15_40917839

AAATCAGAAAAAATGAGATTAAGTTTAGTGATACGACACAAGATCGGGAGGTGAGCTCTGTCTTGAACCAAAGAATGTTCTTGAATTTTGGGTTTTGTTTTGTTTTCTTAAATTGTGGGTATTCTCAAATTTTAATCTTAGTCTCGGGTAGGCAGAAAATAATTATTTCCACTTAGAGGGCTGGAGAAATATTCTTATGTAGAACCTTCAGAAATTAATTGACTAACAGCTAGACTTCAAAGCAATTTAA ............................................(((((...((((((..((..((((........))))..)).....))))))..))))).................................................................................................................................................... ............................................45................................................................111.........................................................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR189784	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR189783	SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell)	SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart)
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................	28		5.00	0.00	4.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTCTTC...............................................................................................................................................	23		5.00	0.00	-	5.00	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................	24		5.00	0.00	5.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................	25		4.00	0.00	4.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTCC...............................................................................................................................................	21		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-
..................................................GTGAGCTCTGTCTTGAACCAAAGAATG.............................................................................................................................................................................	27	1	3.00	3.00	-	-	3.00	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTCTGC.............................................................................................................................................	22		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTCCGG..............................................................................................................................................	21		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
..................................GACACAAGATCGGGAGAT......................................................................................................................................................................................................	18		2.00	0.00	-	-	-	-	-	-	-	1.00	1.00	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCATCT...........................................................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTAATC.............................................................................................................................................	23		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-
................................................AGGTGAGCTCTGTCTGGT........................................................................................................................................................................................	18		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTTTGCC.........................................................................................................................................	28		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTCGGA.............................................................................................................................................	23		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTCC..........................................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTGAG...........................................................................................................................................	26		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................	23	3	1.67	1.67	1.33	0.33	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCATC............................................................................................................................................	26	3	1.33	1.67	-	1.33	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTCGGG.............................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCTTTC...........................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTGTTC..............................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................AGTCTCGGGTAGGCAGAAAATAATCATT...................................................................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTCTCC...............................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCGCTT...........................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................TAGTGATACGACACAAGATCGG...........................................................................................................................................................................................................	22	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTTTCA............................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTTT..........................................................................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTCCAT.............................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCTTTCCC.........................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTCTGG..............................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTTC...........................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCTTTGCC.........................................................................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................AATTTTGGGTTTTGTTTTGTTTTCTTAAACT........................................................................................................................................	31		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-
......................................................................................TTTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTC................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCAC.............................................................................................................................................	25	3	1.00	1.67	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCTTGG...........................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCGCTG...........................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................AATTTTGGGTTTTGTTTTGTTTTCC..............................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................AATTTTGGGTTTTGTTTTGTTTTGTT.............................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCATC............................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTCCC..............................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTC.............................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................AATTTTGGGTTTTGTTTTGTTTCCT..............................................................................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTCCAT.............................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTCTTG.............................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCCC.............................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTC...........................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTTCTTGCC..........................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.................................................GGTGAGCTCTGTCTTGCC.......................................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTCGG..............................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTAATT.............................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................ACTTAGAGGGCTGGAGAAATATTCTC......................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTCC............................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................TTGGGTTTTGTTTTGTTTTCGC.............................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................TGGGTTTTGTTTTGTTTTCTTTGCT.........................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTCCC..........................................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTTCGC.............................................................................................................................................	23	7	0.43	0.14	-	0.43	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................	22	7	0.43	0.43	0.14	0.29	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCACC............................................................................................................................................	26	3	0.33	1.67	-	0.33	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCATTC...........................................................................................................................................	27	3	0.33	1.67	-	0.33	-	-	-	-	-	-	-	-	-	-
....................................................................................ATTTTGGGTTTTGTTTTGTTTTCACTT...........................................................................................................................................	27	3	0.33	1.67	0.33	-	-	-	-	-	-	-	-	-	-	-
...................................................................................AATTTTGGGTTTTGTTTTG....................................................................................................................................................	19	4	0.25	0.25	0.25	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................	21	7	0.14	0.14	0.14	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTTGGGTTTTGTTTTGTTTTCG..............................................................................................................................................	22	7	0.14	0.14	0.14	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTCACTT...........................................................................................................................................	26	7	0.14	0.43	-	0.14	-	-	-	-	-	-	-	-	-	-
.....................................................................................TTTTGGGTTTTGTTTTGTTTTCCC.............................................................................................................................................	24	7	0.14	0.43	-	0.14	-	-	-	-	-	-	-	-	-	-

AAATCAGAAAAAATGAGATTAAGTTTAGTGATACGACACAAGATCGGGAGGTGAGCTCTGTCTTGAACCAAAGAATGTTCTTGAATTTTGGGTTTTGTTTTGTTTTCTTAAATTGTGGGTATTCTCAAATTTTAATCTTAGTCTCGGGTAGGCAGAAAATAATTATTTCCACTTAGAGGGCTGGAGAAATATTCTTATGTAGAACCTTCAGAAATTAATTGACTAACAGCTAGACTTCAAAGCAATTTAA
............................................(((((...((((((..((..((((........))))..)).....))))))..)))))....................................................................................................................................................
............................................45................................................................111.........................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR189784

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR189783

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................

5.00

0.00

4.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTCTTC...............................................................................................................................................

5.00

0.00

5.00

........................................................................................TGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................

5.00

0.00

5.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................

4.00

0.00

4.00

......................................................................................TTTGGGTTTTGTTTTGTTTCC...............................................................................................................................................

3.00

0.00

3.00

..................................................GTGAGCTCTGTCTTGAACCAAAGAATG.............................................................................................................................................................................

3.00

.......................................................................................TTGGGTTTTGTTTTGTTTCTGC.............................................................................................................................................

3.00

0.00

3.00

.......................................................................................TTGGGTTTTGTTTTGTTCCGG..............................................................................................................................................

2.00

0.00

2.00

..................................GACACAAGATCGGGAGAT......................................................................................................................................................................................................

2.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCATCT...........................................................................................................................................

2.00

0.00

2.00

......................................................................................TTTGGGTTTTGTTTTGTTTAATC.............................................................................................................................................

2.00

0.00

1.00

................................................AGGTGAGCTCTGTCTGGT........................................................................................................................................................................................

2.00

0.00

2.00

.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTTTGCC.........................................................................................................................................

2.00

0.00

2.00

......................................................................................TTTGGGTTTTGTTTTGTTTCGGA.............................................................................................................................................

2.00

0.00

2.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTCC..........................................................................................................................................

2.00

0.00

2.00

.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTGAG...........................................................................................................................................

2.00

0.00

2.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................

1.67

1.33

0.33

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCATC............................................................................................................................................

1.33

1.67

1.33

.......................................................................................TTGGGTTTTGTTTTGTTTCGGG.............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCTTTC...........................................................................................................................................

1.00

0.00

1.00

.....................................................................................TTTTGGGTTTTGTTTTGTTGTTC..............................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................AGTCTCGGGTAGGCAGAAAATAATCATT...................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTCTCC...............................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCGCTT...........................................................................................................................................

1.00

0.00

1.00

.........................TAGTGATACGACACAAGATCGG...........................................................................................................................................................................................................

1.00

.....................................................................................TTTTGGGTTTTGTTTTGTTTTTTCA............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTTT..........................................................................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTCCAT.............................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCTTTCCC.........................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTCTGG..............................................................................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTTC...........................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCTTTGCC.........................................................................................................................................

1.00

0.00

1.00

...................................................................................AATTTTGGGTTTTGTTTTGTTTTCTTAAACT........................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTTTCTTTCC..........................................................................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTC................................................................................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCAC.............................................................................................................................................

1.00

1.67

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCTTGG...........................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCGCTG...........................................................................................................................................

1.00

0.00

1.00

...................................................................................AATTTTGGGTTTTGTTTTGTTTTCC..............................................................................................................................................

1.00

0.00

1.00

...................................................................................AATTTTGGGTTTTGTTTTGTTTTGTT.............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCATC............................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTCCC..............................................................................................................................................

1.00

0.00

1.00

.....................................................................................TTTTGGGTTTTGTTTTGTTTTCTC.............................................................................................................................................

1.00

0.00

1.00

...................................................................................AATTTTGGGTTTTGTTTTGTTTCCT..............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTCCAT.............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTCTTG.............................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCCC.............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCTCTC...........................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTTTCTTGCC..........................................................................................................................................

1.00

0.00

1.00

.................................................GGTGAGCTCTGTCTTGCC.......................................................................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTTCGG..............................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTTAATT.............................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................ACTTAGAGGGCTGGAGAAATATTCTC......................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTCC............................................................................................................................................

1.00

0.00

1.00

.......................................................................................TTGGGTTTTGTTTTGTTTTCGC.............................................................................................................................................

1.00

0.00

1.00

........................................................................................TGGGTTTTGTTTTGTTTTCTTTGCT.........................................................................................................................................

1.00

0.00

1.00

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCTTCCC..........................................................................................................................................

1.00

0.00

1.00

......................................................................................TTTGGGTTTTGTTTTGTTTTCGC.............................................................................................................................................

0.43

0.14

0.43

.....................................................................................TTTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................

0.43

0.14

0.29

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCACC............................................................................................................................................

0.33

1.67

0.33

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCATTC...........................................................................................................................................

0.33

1.67

0.33

....................................................................................ATTTTGGGTTTTGTTTTGTTTTCACTT...........................................................................................................................................

0.33

1.67

0.33

...................................................................................AATTTTGGGTTTTGTTTTG....................................................................................................................................................

0.25

......................................................................................TTTGGGTTTTGTTTTGTTTTC...............................................................................................................................................

0.14

......................................................................................TTTGGGTTTTGTTTTGTTTTCG..............................................................................................................................................

0.14

.....................................................................................TTTTGGGTTTTGTTTTGTTTTCACTT...........................................................................................................................................

0.14

0.43

0.14

.....................................................................................TTTTGGGTTTTGTTTTGTTTTCCC.............................................................................................................................................

0.14

0.43

0.14