| (1) BREAST | (11) CELL-LINE | (1) CERVIX | (1) HELA | (1) LIVER | (1) OTHER | (4) SKIN | (1) XRN.ip |
| CTAGGCTGCACTCTGTGCCTTTGTACTATAACTAAGGTGATTTTTTTCTTGGGCTTCTGGCCTAGAAAAATATATTATGCTTTTTATTCTTGCTGACTGTGGTTTTCTTAAGTACCTCACTTAATTCTCTCAGCCTATAAATTTCCACTTATGAAATCTGCTAATAAATGTCCTTTTTTTTTTTTTTTAATCTTTTTTAGAATCCTCACAAATTCTTTCCTGATGAACGTTTTGGGGATGAAAGTCCACT ...................................................................................................................................(((......(((((.......)))))..)))........................................................................................ ...................................................................................................................................132.................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR040022(GSM532907) G575N. (cervix) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | TAX577743(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTACTT..................................................... | 26 | 51.00 | 0.00 | 27.00 | 23.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACTT..................................................... | 27 | 9 | 48.78 | 2.11 | 24.56 | 21.89 | 0.78 | 1.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCCTG..................................................... | 26 | 36.00 | 0.00 | 15.00 | 17.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCTG..................................................... | 27 | 9 | 35.33 | 2.11 | 18.22 | 14.22 | 1.22 | 1.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATTG..................................................... | 27 | 9 | 28.67 | 2.11 | 15.78 | 11.44 | 0.67 | 0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACGG..................................................... | 27 | 9 | 24.56 | 2.11 | 12.33 | 10.44 | 1.22 | 0.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTATTG..................................................... | 26 | 24.00 | 0.00 | 9.00 | 15.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTACGG..................................................... | 26 | 19.00 | 0.00 | 10.00 | 8.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATTT..................................................... | 27 | 9 | 10.22 | 2.11 | 6.67 | 3.00 | - | 0.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACTA..................................................... | 27 | 9 | 7.00 | 2.11 | 4.22 | 2.22 | - | 0.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCTG..................................................... | 27 | 6 | 6.50 | 0.33 | 4.17 | 2.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTATTT..................................................... | 26 | 6.00 | 0.00 | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCACT...................................................... | 26 | 5.00 | 0.00 | 3.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCAACT...................................................... | 26 | 5.00 | 0.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTACTA..................................................... | 26 | 5.00 | 0.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCTTG..................................................... | 27 | 9 | 4.44 | 2.11 | 2.00 | 1.89 | 0.22 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCTCT...................................................... | 26 | 4.00 | 0.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................AACGTTTTGGGGATGAAAGT..... | 20 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACCG..................................................... | 27 | 9 | 3.78 | 2.11 | 1.44 | 1.44 | 0.33 | 0.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCTT..................................................... | 27 | 9 | 3.67 | 2.11 | 2.22 | 1.33 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTTTG..................................................... | 27 | 4 | 3.25 | 1.00 | 1.50 | 1.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATT...................................................... | 26 | 9 | 3.11 | 2.11 | 1.67 | 1.33 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCTTG..................................................... | 26 | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCCGG..................................................... | 26 | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTACTT..................................................... | 25 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCGG..................................................... | 27 | 9 | 2.67 | 2.11 | 1.00 | 1.44 | - | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAATG..................................................... | 27 | 9 | 2.33 | 2.11 | 1.00 | 1.00 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCTT..................................................... | 27 | 6 | 2.17 | 0.33 | 0.83 | 1.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCT......................................................... | 23 | 9 | 2.11 | 2.11 | 0.67 | 0.89 | - | - | 0.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTTCTG..................................................... | 26 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCCT...................................................... | 25 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTCCTG..................................................... | 25 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCCTT..................................................... | 26 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTATT...................................................... | 25 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTTCTG..................................................... | 25 | 2.00 | 0.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCACC...................................................... | 26 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTTTT..................................................... | 27 | 3 | 1.67 | 1.67 | 0.33 | 1.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCTTT..................................................... | 27 | 9 | 1.56 | 2.11 | 1.00 | 0.44 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCT...................................................... | 26 | 9 | 1.56 | 2.11 | 0.56 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTACCG..................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCAAG....................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TGAACGTTTTGGGGATGA......... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCCAAG...................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCAC....................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTTTTTTTTTTTTAATCTTTTTCTTG................................................. | 27 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTTTTCTAT.................................................. | 29 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TTTTTTTTTTTTAATCTTTTTTTTTG................................................ | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................GTCCTTTTTTTTTTTTTTTAATC.......................................................... | 23 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTATTG.............................................................. | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TTTTTTTTTTTTTAATCTTTTTTCTA................................................. | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAAACCT........................................................ | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCATCT...................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCCTTG...................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCATT...................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAATCTACTT..................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTTT...................................................... | 26 | 4 | 1.00 | 1.00 | 0.75 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................GTCCTTTTTTTTTTTTTTCTTA........................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................TTTTTTTCTTGGGCTTTTTA.............................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCAATG...................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTCCTT..................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAATC.......................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCAAAC...................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCCTC...................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................CCTGATGAACGTTTTGGG.............. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTTTTTATTG................................................. | 29 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAATCTAC....................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATGTCCTTTTTTTTTTTATG............................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTCCGG..................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TTTTTTTTTTTTAATCTTTTTTTTC................................................. | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTTTTTTTTTTTTAATCTTTTACG................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCATTC...................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................ATAAATTTCCACTTATTG................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ...............................................................................................................................................................................TTTTTTTTTTTTTAATCTTTTTCCC.................................................. | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTTATT..................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTTTTTTTAAG................................................ | 30 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTTCAGG.................................................... | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAAATT......................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTTTTTAATCTTTTTTTAAT................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTTTTTA................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................AAGGTGATTTTTTTCTTTGAG.................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........TCTGTGCCTTTGTACTACGT........................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCGG........................................................ | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCTGG..................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCACCT...................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTTTTTTTTTTTTAATCTTTCCTT................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................GTTTTCTTAAGTACCTCACTTAA.............................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTCTGG.......................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCTTT..................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TTTTTTTTTTTTTAATCTTTTTTTTA................................................. | 26 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCCCCT...................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAATCTACTG..................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................AGGTGATTTTTTTCTTTGAG.................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................AAATCTGCTAATAAATGTCCTTTTTTTTTT................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTTCCG..................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTAATT..................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................CTTTTTTTTTTTTTTTAATCTAG....................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTCAG...................................................... | 25 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATGTCCTTTTTTTTTCGG................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TTTTTTTTTTTTAATCTTTTCAAG.................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCC....................................................... | 25 | 9 | 0.89 | 2.11 | 0.67 | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCTT...................................................... | 26 | 9 | 0.89 | 2.11 | 0.56 | 0.22 | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCT...................................................... | 26 | 6 | 0.83 | 0.33 | - | 0.67 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCTA..................................................... | 27 | 9 | 0.78 | 2.11 | 0.56 | 0.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATGG..................................................... | 27 | 9 | 0.78 | 2.11 | 0.22 | 0.33 | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATTA..................................................... | 27 | 9 | 0.78 | 2.11 | 0.22 | 0.44 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACGT..................................................... | 27 | 9 | 0.67 | 2.11 | 0.33 | 0.11 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAGTG..................................................... | 27 | 9 | 0.67 | 2.11 | 0.22 | 0.22 | - | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAATT..................................................... | 27 | 9 | 0.56 | 2.11 | 0.33 | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAT....................................................... | 25 | 9 | 0.56 | 2.11 | 0.44 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTATG..................................................... | 27 | 6 | 0.50 | 0.33 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACAG..................................................... | 27 | 9 | 0.44 | 2.11 | 0.22 | 0.11 | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACTC..................................................... | 27 | 9 | 0.44 | 2.11 | 0.33 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CCTTTTTTTTTTTTTTTAATCTTTTT..................................................... | 26 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTT........................................................ | 24 | 6 | 0.33 | 0.33 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCTA..................................................... | 27 | 6 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCAG...................................................... | 26 | 9 | 0.33 | 2.11 | - | 0.22 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATCG..................................................... | 27 | 9 | 0.33 | 2.11 | 0.11 | - | - | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTTTCTAG.................................................. | 30 | 4 | 0.25 | 1.00 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGTCCTTTTTTTTTTTTTTTAAT........................................................... | 23 | 4 | 0.25 | 0.25 | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACG...................................................... | 26 | 9 | 0.22 | 2.11 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTGCTG..................................................... | 27 | 9 | 0.22 | 2.11 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAA....................................................... | 25 | 9 | 0.22 | 2.11 | - | 0.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCATG..................................................... | 27 | 9 | 0.22 | 2.11 | - | 0.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACC...................................................... | 26 | 9 | 0.22 | 2.11 | - | - | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAAT...................................................... | 26 | 9 | 0.22 | 2.11 | - | 0.11 | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACAA..................................................... | 27 | 9 | 0.22 | 2.11 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTACTG.................................................... | 28 | 6 | 0.17 | 0.33 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCGG..................................................... | 27 | 6 | 0.17 | 0.33 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTATT..................................................... | 27 | 6 | 0.17 | 0.33 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCCTG.................................................... | 28 | 6 | 0.17 | 0.33 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTTCCG..................................................... | 27 | 6 | 0.17 | 0.33 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACAT..................................................... | 27 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACCT..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTGCGG..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCCT..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTATG...................................................... | 26 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTACA...................................................... | 26 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAAA...................................................... | 26 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCATT..................................................... | 27 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAACG..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCGT..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAGTT..................................................... | 27 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCTGG..................................................... | 27 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCCCG..................................................... | 27 | 9 | 0.11 | 2.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTCTTA..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTGTTG..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TCCTTTTTTTTTTTTTTTAATCTAACT..................................................... | 27 | 9 | 0.11 | 2.11 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTAGGCTGCACTCTGTGCCTTTGTACTATAACTAAGGTGATTTTTTTCTTGGGCTTCTGGCCTAGAAAAATATATTATGCTTTTTATTCTTGCTGACTGTGGTTTTCTTAAGTACCTCACTTAATTCTCTCAGCCTATAAATTTCCACTTATGAAATCTGCTAATAAATGTCCTTTTTTTTTTTTTTTAATCTTTTTTAGAATCCTCACAAATTCTTTCCTGATGAACGTTTTGGGGATGAAAGTCCACT ...................................................................................................................................(((......(((((.......)))))..)))........................................................................................ ...................................................................................................................................132.................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR040022(GSM532907) G575N. (cervix) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | TAX577743(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................TTTTTTTCTTGGGCTTAA................................................................................................................................................................................................ | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................CAAATTCTTTCCTGATACTG...................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................TTATAGGCTGAGAGAATTAAGTGAGGTAC.............................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................CTGAGAGAATTAAGTGAGGTAC..................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................AATAAATGTCCTTTTTTTTTTTTTTCC............................................................. | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ................................................................................................................................................................................AAGATTAAAAAAAAAAAA........................................................ | 18 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................AAAAAAAAAAAAGGACATTTA................................................................. | 21 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |