ID: uc010ast.1_intron_0_0_chr14_77803071_r.5p
GENE: (6)
chr14:77807095-77807344-


(1)
AGO2.ip 		(4)
B-CELL 		(7)
BRAIN 		(16)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(1)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(1)
OTHER 		(4)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TGGAAATTAGGTACTGAATTGATGTCAGAACCCACATATTTGAAAGTCGTGTTACTTTTTTTTTTTTTTTTGGTATAATCAAAGAAGGAATGGTATCATCTGACAGAGAAGATGAAAAACAAAAAACACTCCAGAGTCCCCACCGCTTTTTTTTGTCTTTAGAGTAGGAGTGCTGTTTAGAAATGTTGCTTTGGAATCAAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTCTGCATTTAGCTTTCTT
.............................................((((((.((((.....(((((((((((((...))))))))))))).)))).)))..)))..................................................................................................................................................
............................................45.............................................................108............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
.................................................TGTTACTTTTTTTTTTTTTCTGG..................................................................................................................................................................................237.000.004.003.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTGG..................................................................................................................................................................................286.000.005.001.00-----------------------------------------------
..................................................................................AGAAGGAATGGTATCATCTGAC..................................................................................................................................................2215.005.00------3.00-------------1.001.00---------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTCTGG..................................................................................................................................................................................265.000.003.002.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTCTGG.................................................................................................................................................................................275.000.002.003.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTGG.................................................................................................................................................................................2914.004.002.002.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTGGT...................................................................................................................................................................................2714.001.003.001.00-----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTCGAG...............................................................................................................................................................................264.000.002.002.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTGGT..................................................................................................................................................................................2814.002.004.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTCGG.................................................................................................................................................................................294.000.003.001.00-----------------------------------------------
.........................................................................................ATGGTATCATCTGACAGAGAAGAT.........................................................................................................................................2413.003.00-------3.00-----------------------------------------
.......................................................................................................................................................TTTGTCTTTAGAGTAGGAGTGCTG...........................................................................2413.003.00-3.00-----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTCGG..................................................................................................................................................................................233.000.002.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTCTGG................................................................................................................................................................................283.000.001.002.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTGGT.................................................................................................................................................................................293.000.002.001.00-----------------------------------------------
.........................................................................................ATGGTATCATCTGACAGAGA.............................................................................................................................................2013.003.00----3.00--------------------------------------------
...................................................................................................................................................................GTAGGAGTGCTGTTTAGAAATGTTGCTTTGGAATCAAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTCTGCATTTAG.......8013.003.00---------3.00---------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTCGG..................................................................................................................................................................................2813.002.001.002.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTGG...................................................................................................................................................................................253.000.002.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTG....................................................................................................................................................................................242.000.002.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTCTGG.......................................................................................................................................................................................232.000.001.001.00-----------------------------------------------
...................TGATGTCAGAACCCACATAAGTA................................................................................................................................................................................................................232.000.00-----2.00-------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTGG........................................................................................................................................................................................222.000.001.001.00-----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTGGT................................................................................................................................................................................2512.002.001.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTCGGG.................................................................................................................................................................................272.000.001.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTCTGG...................................................................................................................................................................................252.000.002.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTGG........................................................................................................................................................................................202.000.002.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTG......................................................................................................................................................................................242.000.002.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTCGG.......................................................................................................................................................................................212.000.001.001.00-----------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAAAA.............................................................................................................................2712.002.00--2.00----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTT........................................................................................................................................................................................2012.002.002.00------------------------------------------------
.............................................................................ATCAAAGAAGGAATGGTATCA........................................................................................................................................................2112.002.00-----------2.00-------------------------------------
............................................AGTCGTGTTACTTTTTTCTGG.........................................................................................................................................................................................212.000.002.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTCGG................................................................................................................................................................................252.000.001.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTGG.................................................................................................................................................................................2712.002.001.001.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTTGGT...............................................................................................................................................................................312.000.00-2.00-----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTTTGGT................................................................................................................................................................................3112.002.001.001.00-----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTTCGG.................................................................................................................................................................................302.000.00-2.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTGG....................................................................................................................................................................................242.000.001.001.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTGG....................................................................................................................................................................................2612.001.001.001.00-----------------------------------------------
.....................................................ACTTTTTTTTTTTTTTTTGGTAGGG............................................................................................................................................................................252.000.001.001.00-----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTT...........................................................................................................................................................................................2012.002.00-2.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTCTGG.....................................................................................................................................................................................232.000.002.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTGGT.....................................................................................................................................................................................252.000.001.001.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTCGG...................................................................................................................................................................................2712.001.001.001.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTGG..................................................................................................................................................................................262.000.002.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTCGG.................................................................................................................................................................................272.000.001.001.00-----------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAAAAAC...........................................................................................................................2912.002.00--2.00----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTT.....................................................................................................................................................................................2512.002.00-2.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTTGG................................................................................................................................................................................282.000.002.00------------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAAAAAA...........................................................................................................................2911.001.00--1.00----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTCTT..................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTG.....................................................................................................................................................................................231.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTAAGC...................................................................................................................................................................................221.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTATG................................................................................................................................................................................251.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTT.........................................................................................................................................................................................2111.001.001.00------------------------------------------------
..........................................................................................................................................................................................................................AGGTTTCCAAAGTTTCTGCATTT.........2311.001.00-----------------------------1.00-------------------
..........................................................................................................AGAAGATGAAAAACAAAAAACACT........................................................................................................................2411.001.00-------------1.00-----------------------------------
.................................................................................................................................................................GAGTAGGAGTGCTGTTTAGAAATGTT...............................................................2611.001.00-----------------1.00-------------------------------
.....................................................................................AGGAATGGTATCATCTGACAGAGAAGAT.........................................................................................................................................2811.001.00--1.00----------------------------------------------
..................................................................................AGAAGGAATGGTATCATCTGACAGAGAAG...........................................................................................................................................2911.001.00-----------------------------------------1.00-------
.................................................................................AAGAAGGAATGGTATCATCTGACA.................................................................................................................................................2411.001.00-------------------------------------------1.00-----
..............................................TCGTGTTACTTTTTTTTTTTTTGGGA..................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
.................................................................................AAGAAGGAATGGTATCATCTGACAGAGA.............................................................................................................................................2811.001.00------------------1.00------------------------------
..........................................................................................................................................................GTCTTTAGAGTAGGAGTGCTGTA.........................................................................231.000.00---------------------------1.00---------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTTTGGC................................................................................................................................................................................311.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTGGT......................................................................................................................................................................................221.000.00-1.00-----------------------------------------------
...............................................................................................................................................................TAGAGTAGGAGTGCTGTTT........................................................................1911.001.00---------------------------------1.00---------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTTGGT.................................................................................................................................................................................301.000.001.00------------------------------------------------
................................................................................................................................................................................TTAGAAATGTTGCTTTGGAATCAAATGC..............................................2811.001.00--1.00----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTCTGG...............................................................................................................................................................................261.000.001.00------------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTGG....................................................................................................................................................................................271.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTCTGG..................................................................................................................................................................................2811.001.001.00------------------------------------------------
..................................................................................................................................................TTTTTTTTGTCTTTAGAGTAGGAGTGC.............................................................................2711.001.00--1.00----------------------------------------------
................................................................................AAAGAAGGAATGGTATCATCT.....................................................................................................................................................2111.001.00---1.00---------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTCGGT...............................................................................................................................................................................291.000.001.00------------------------------------------------
..........................................................................................TGGTATCATCTGACAGAGAAGAT.........................................................................................................................................2311.001.00------------------------------------------1.00------
.............................................................................................................................................ACCGCTTTTTTTTGTCTTTAGAGTAG...................................................................................2611.001.00-1.00-----------------------------------------------
......................TGTCAGAACCCACATATTGCCG..............................................................................................................................................................................................................221.000.00-------------------------------1.00-----------------
...............................................CGTGTTACTTTTTTTTTTTGG......................................................................................................................................................................................211.000.001.00------------------------------------------------
............................................................TTTTTTTTTTTGGTATATACG.........................................................................................................................................................................211.000.001.00------------------------------------------------
......................................................................................GGAATGGTATCATCTGACAGAGAAGAT.........................................................................................................................................2711.001.00-------------------------1.00-----------------------
................AATTGATGTCAGAACCCACA......................................................................................................................................................................................................................2011.001.00------------------------1.00------------------------
..................................................GTTACTTTTTTTTTTTTTTCGAG.................................................................................................................................................................................231.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTCGG....................................................................................................................................................................................261.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTCTTT.................................................................................................................................................................................241.000.00-1.00-----------------------------------------------
...........................................................................................................................................................TCTTTAGAGTAGGAGTGCTGTCTAG......................................................................251.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTG.........................................................................................................................................................................................191.000.00-1.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTTTGC...............................................................................................................................................................................311.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTCGGT...................................................................................................................................................................................271.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTCGGC.................................................................................................................................................................................241.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTTTGG...............................................................................................................................................................................311.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTCGGT................................................................................................................................................................................281.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTGG.....................................................................................................................................................................................231.000.001.00------------------------------------------------
......................................................CTTTTTTTTTTTTTTTTGGTATCCGC..........................................................................................................................................................................261.000.001.00------------------------------------------------
..................................................GTTACTTTTTTTTTTTTTTTTCACC...............................................................................................................................................................................251.000.001.00------------------------------------------------
................................................................................AAAGAAGGAATGGTATCATCTGACAG................................................................................................................................................2611.001.00--1.00----------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAA...............................................................................................................................2511.001.00--1.00----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTCTGG.................................................................................................................................................................................301.000.001.00------------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTGG...................................................................................................................................................................................281.000.00-1.00-----------------------------------------------
............................AACCCACATATTTGAAAGTCG.........................................................................................................................................................................................................2111.001.00------------1.00------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTCCGG....................................................................................................................................................................................2411.002.00-1.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTCGGG..................................................................................................................................................................................2811.001.001.00------------------------------------------------
...................................................................................GAAGGAATGGTATCATCTGACAGAGAAGA..........................................................................................................................................2911.001.00---------------------------------------1.00---------
..............................................................................................................................................................TTAGAGTAGGAGTGCTGTTTAGAA....................................................................2411.001.00-------------1.00-----------------------------------
...................................................TTACTTTTTTTTTTTTTTTTGCGT...............................................................................................................................................................................241.000.00-1.00-----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTCGCT.................................................................................................................................................................................301.000.00-1.00-----------------------------------------------
..........................................................................................TGGTATCATCTGACAGAGAAGACGA.......................................................................................................................................251.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTCCT................................................................................................................................................................................251.000.001.00------------------------------------------------
...................................................TTACTTTTTTTTTTTTTTTTGGTATA.............................................................................................................................................................................2611.001.001.00------------------------------------------------
.......................................................................GGTATAATCAAAGAAAATC................................................................................................................................................................191.000.00---1.00---------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTCCGG.................................................................................................................................................................................271.000.00-1.00-----------------------------------------------
............................................................................AATCAAAGAAGGAATGGTATCATCT.....................................................................................................................................................2511.001.00---1.00---------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTGG.......................................................................................................................................................................................211.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTCGG..................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
................................................................................................................................................................AGAGTAGGAGTGCTGTTTAGAAATGT................................................................2611.001.00--1.00----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTG......................................................................................................................................................................................221.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTGGG..................................................................................................................................................................................2811.002.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTGG.....................................................................................................................................................................................251.000.00-1.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTGGTA......................................................................................................................................................................................241.000.001.00------------------------------------------------
...............................................................................................................ATGAAAAACAAAAAACACTCCAG....................................................................................................................2311.001.00-------------------------------------1.00-----------
...........................................AAGTCGTGTTACTTTTTTTTTTTCTTT....................................................................................................................................................................................2711.001.001.00------------------------------------------------
..........................................AAAGTCGTGTTACTTTTTTTTTTTTGG.....................................................................................................................................................................................271.000.00-1.00-----------------------------------------------
..................................................................................AGAAGGAATGGTATCATCTGACAGAGAAGGA.........................................................................................................................................3111.001.001.00------------------------------------------------
........................................................................................AATGGTATCATCTGACAGAGA.............................................................................................................................................2111.001.00-----------------------1.00-------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTCCGG..................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
........................................................................................AATGGTATCATCTGACAGAGAAGATGT.......................................................................................................................................271.000.00--1.00----------------------------------------------
.....................................................................................................................................................................................................................CAATCAGGTTTCCAAAGTTTCTGCATTTAGC......3111.001.00----------1.00--------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAAA..............................................................................................................................2611.001.00--1.00----------------------------------------------
.....................................ATTTGAAAGTCGTGTTA....................................................................................................................................................................................................1711.001.00----------------------------------1.00--------------
..................TTGATGTCAGAACCCACATATTTGAAAG............................................................................................................................................................................................................2811.001.00----------1.00--------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTGGG...................................................................................................................................................................................2711.001.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTCCGG..................................................................................................................................................................................231.000.001.00------------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACAAAAAA............................................................................................................................2811.001.00--1.00----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTCTG................................................................................................................................................................................281.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTCTGG.....................................................................................................................................................................................201.000.00-1.00-----------------------------------------------
.................................................TGTTACTTTTTTTTTTATTC.....................................................................................................................................................................................201.000.00----------------------1.00--------------------------
...........................................................................................GGTATCATCTGACAGAGAAGATGA.......................................................................................................................................2411.001.00--1.00----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTCCGG...............................................................................................................................................................................291.000.001.00------------------------------------------------
......................................................CTTTTTTTTTTTTTTTTGGTACGG............................................................................................................................................................................241.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTT......................................................................................................................................................................................2411.001.001.00------------------------------------------------
..................................................................................................TCTGACAGAGAAGATGAAAAACA.................................................................................................................................2311.001.00--1.00----------------------------------------------
.....................................................................................AGGAATGGTATCATCTGACAGAGAAG...........................................................................................................................................2611.001.00--1.00----------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTTTTCGG..................................................................................................................................................................................291.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTCGGG.......................................................................................................................................................................................211.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTCTGG...............................................................................................................................................................................311.000.00-1.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTGGTA...............................................................................................................................................................................3111.001.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTG...................................................................................................................................................................................271.000.001.00------------------------------------------------
...................................ATATTTGAAAGTCGTGTGA....................................................................................................................................................................................................191.000.00--------------------------------1.00----------------
....................................................TACTTTTTTTTTTTTTTTTGGAGAG.............................................................................................................................................................................251.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTCTGG.................................................................................................................................................................................2911.002.00-1.00-----------------------------------------------
.................................................................................................................................................................................TAGAAATGTTGCTTTGGAATCAAATGC..............................................2711.001.00--1.00----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTCTGG................................................................................................................................................................................301.000.001.00------------------------------------------------
.................................................................................................................................................CTTTTTTTTGTCTTTAGAGTAGGAG................................................................................2511.001.00-1.00-----------------------------------------------
........................................................TTTTTTTTTTTTTTTGGTATGATG..........................................................................................................................................................................241.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTGGG.................................................................................................................................................................................291.000.00-1.00-----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTCGGG.................................................................................................................................................................................241.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTCGGT....................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
.........................................................................................ATGGTATCATCTGACAGAGAAG...........................................................................................................................................2211.001.00-----------------------------------1.00-------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTCTTG................................................................................................................................................................................301.000.001.00------------------------------------------------
..........................................................................................................................................................GTCTTTAGAGTAGGAGTGCTGTTTAGA.....................................................................2711.001.00----1.00--------------------------------------------
................................................................................................................................................GCTTTTTTTTGTCTTTAG........................................................................................1811.001.00---1.00---------------------------------------------
........................................................................................................................................TCCCCACCGCTTTTTTTTGTCTCTA.........................................................................................251.000.00--------------1.00----------------------------------
............................................AGTCGTGTTACTTTTTTTCTGG........................................................................................................................................................................................221.000.001.00------------------------------------------------
...................................................TTACTTTTTTTTTTTTTTTTGTTTT..............................................................................................................................................................................251.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTGG......................................................................................................................................................................................2211.002.00--------------1.00----------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTCTTT.....................................................................................................................................................................................261.000.001.00------------------------------------------------
.......................................................................................................................................................TTTGTCTTTAGAGTAGG..................................................................................1711.001.00--------------------------1.00----------------------
.................................................TGTTACTTTTTTTTTTTTTTTTGGTA...............................................................................................................................................................................2611.001.00-1.00-----------------------------------------------
......................TGTCAGAACCCACATATTATTG..............................................................................................................................................................................................................221.000.00-------------------1.00-----------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTG...................................................................................................................................................................................251.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTCTTG..................................................................................................................................................................................261.000.001.00------------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTT........................................................................................................................................................................................2311.001.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTTAGG...............................................................................................................................................................................311.000.001.00------------------------------------------------
...............................................................................CAAAGAAGGAATGGTATCATCTGACAGA...............................................................................................................................................2811.001.00--1.00----------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTCGGG...............................................................................................................................................................................261.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTC..................................................................................................................................................................................281.000.001.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTC...................................................................................................................................................................................251.000.00-1.00-----------------------------------------------
................................................................................AAAGAAGGAATGGTATCATCTGACAGAGA.............................................................................................................................................2911.001.00--1.00----------------------------------------------
...................................................................................................CTGACAGAGAAGATGAAAA....................................................................................................................................1911.001.00----------------------------1.00--------------------
............ACTGAATTGATGTCAGAACCCACAT.....................................................................................................................................................................................................................2511.001.00----------------------------------------1.00--------
................................................................................................................................CTCCAGAGTCCCCACCGCTTTTT...................................................................................................2311.001.001.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTTTTCGG................................................................................................................................................................................281.000.00-1.00-----------------------------------------------
..................................................................................................................................................................................AGAAATGTTGCTTTGGAATCAAATGC..............................................2611.001.00--1.00----------------------------------------------
...........................................................................................................................................CCACCGCTTTTTTTTGTT.............................................................................................181.000.00--------------------------------------1.00----------
.................................................TGTTACTTTTTTTTTGGTA......................................................................................................................................................................................191.000.001.00------------------------------------------------
....................................................................................................................AAACAAAAAACACTCAACG...................................................................................................................191.000.00-----1.00-------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTCAG..................................................................................................................................................................................231.000.001.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTGGTA.....................................................................................................................................................................................231.000.001.00------------------------------------------------
...........................................AAGTCGTGTTACTTTTTTTTTTTGG......................................................................................................................................................................................2511.001.00-1.00-----------------------------------------------
..................................................................................AGAAGGAATGGTATCATCTGACA.................................................................................................................................................2311.001.00----------------1.00--------------------------------
..............................................TCGTGTTACTTTTTTTGG..........................................................................................................................................................................................181.000.00------------1.00------------------------------------
..............................................TCGTGTTACTTTTTTCTG..........................................................................................................................................................................................181.000.001.00------------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTG.........................................................................................................................................................................................211.000.001.00------------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTCTT...................................................................................................................................................................................251.000.00-1.00-----------------------------------------------
............................................AGTCGTGTTACTTTTTTTTTTTTTTTTTTCC...............................................................................................................................................................................311.000.001.00------------------------------------------------
.................................................TGTTACTTTTTTTTTTTTTCGGT..................................................................................................................................................................................231.000.00-1.00-----------------------------------------------
..............................................TCGTGTTACTTTTTTTTTTTTTGGCA..................................................................................................................................................................................261.000.00-1.00-----------------------------------------------
................................................................................................................................................................AGAGTAGGAGTGCTGTTT........................................................................1820.500.50--------------------------------------------0.50----
...................................................................................................CTGACAGAGAAGATGAAA.....................................................................................................................................1820.500.50---------------------------------------------0.50---
........................................................................................AATGGTATCATCTGACAG................................................................................................................................................1830.330.33-----------------------------------------------0.33-
..................................................................................................TCTGACAGAGAAGATGA.......................................................................................................................................1730.330.33--0.33----------------------------------------------
..........................................................................................TGGTATCATCTGACAG................................................................................................................................................1630.330.33----------------------------------------------0.33--
.................................................TGTTACTTTTTTTTTTTTTTTTGG.................................................................................................................................................................................2470.290.29-0.29-----------------------------------------------
..................................................................................................TCTGACAGAGAAGATG........................................................................................................................................1670.290.29--0.14-------0.14--------------------------------------
.................................................TGTTACTTTTTTTTTTTTTTTTGGC................................................................................................................................................................................2570.140.290.14------------------------------------------------
...................................................................................GAAGGAATGGTATCATCT.....................................................................................................................................................1870.140.14------------------------------------------------0.14
.................................................TGTTACTTTTTTTTTTTTTTTTGGG................................................................................................................................................................................2570.140.29-0.14-----------------------------------------------

Antisense strand
TGGAAATTAGGTACTGAATTGATGTCAGAACCCACATATTTGAAAGTCGTGTTACTTTTTTTTTTTTTTTTGGTATAATCAAAGAAGGAATGGTATCATCTGACAGAGAAGATGAAAAACAAAAAACACTCCAGAGTCCCCACCGCTTTTTTTTGTCTTTAGAGTAGGAGTGCTGTTTAGAAATGTTGCTTTGGAATCAAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTCTGCATTTAGCTTTCTT
.............................................((((((.((((.....(((((((((((((...))))))))))))).)))).)))..)))..................................................................................................................................................
............................................45.............................................................108............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189784SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
...............................................AAAAAAAAAAAAAAAAGTAACACG................................................................................................................................................................................... 2423.003.00--------3.00----------------------------------------
..........................................................TTTTTTTTTTTTTGGTATCGA........................................................................................................................................................................... 212.000.00---------------1.00--------------1.00------------------
...................TTTCAAATATGTGGGTTCTGACATCA............................................................................................................................................................................................................. 2611.001.00--1.00----------------------------------------------
.................................................................................................................GAAAAACAAAAAACACTTG...................................................................................................................... 191.000.001.00------------------------------------------------
........................................................................................................................................................................TTTGATTCCAAAGCAACATTTCTAAACAGCACT................................................. 3311.001.00--1.00----------------------------------------------
.......................................................................................................................CAAAAAACACTCCAGAGAC................................................................................................................ 191.000.00------------------------------------1.00------------