| (8) CELL-LINE | (1) CERVIX | (4) OTHER |
| TTCAACAATCTGCTTCAAAATATTCCCCTTCTCTGAATCTAGAGCTGCACTGGCAACATTAGAGAAGTTTTTCCTTAAAAAAAAAATTAACAGTTGTCCTTTTCTTTTTGCCCCTTGACAGGATTACAGACTAGTTACATACAGTAAATGGGTTGTGAAGGTGATGTCCATCGATCATTTTTTTCCTTTTTTTTTTGTAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAATTTATGGACAATGAA .......................................................................................(((((((((((((..((............)).)))))....)))).))))..(((((.(((.(((....(((((((((........)))))))))..)))...))).)))))................................................... .................................................................................82....................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189784 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189787 | SRR040010(GSM532895) G529N. (cervix) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTTCTG.................................................. | 25 | 11.00 | 0.00 | 5.00 | - | - | 3.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTCTG................................................... | 24 | 8.00 | 0.00 | 5.00 | - | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTCTG.................................................... | 23 | 6.00 | 0.00 | 4.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | |
| ...................................................................................................................................................................................TTTTTCCTTTTTTTTTTGTTGGC................................................ | 23 | 5.00 | 0.00 | - | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTCAG.................................................... | 23 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTTCCTTTTTTTTTTGTTGGC................................................ | 22 | 3.00 | 0.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTCCTTTTTTTTTTGTAGAG................................................ | 25 | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTCTG...................................................... | 21 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................ACACTACCTAACTCCAATTCATG......... | 23 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................CTACCTAACTCCAATTTACG......... | 20 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTTTCCTTTTTTTTTAAGC................................................... | 20 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTTCCTTTTTTTTTTGTCGGC................................................ | 21 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTGTC.................................................. | 24 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTCG.................................................... | 22 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTCCTTTTTTTTTTGCTTG................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTAATG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTGGT.................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTAAGG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTCCTC................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCATTTTTTTCCTTTTTTTTTTTAAG.................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTCTG.................................................. | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTGTG.................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTCCTTTTTTTTTTGTCCG................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTCCTG................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................TTAACAGTTGTCCTTTTCTGCAT............................................................................................................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .......................................................................................................................................................................................TCCTTTTTTTTTTGTCGGC................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................ACACTACCTAACTCCAATTTAT.......... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................TACAGTAAATGGGTTCTTT............................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................ACACTACCTAACTCCAACTT............ | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTTCCT.................................................. | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTCAG..................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTTCCTTTTTTTTTTGTCGGC................................................ | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTTGG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTTCCC.................................................. | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTTAAG.................................................. | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTGTGC................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................ATCATTTTTTTCCTTTTTTTTTTTG.................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ...........................................................................................AGTTGTCCTTTTCTTTTTG............................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTTTTCCTTTTTTTTTTGGCCG................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TCATTTTTTTCCTTTTTTTTTTTG.................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...................................................................................................................................................................................TTTTTCCTTTTTTTTTATGT................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ............................................................................................GTTGTCCTTTTCTTTTTGTTC......................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTCGG................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTCT..................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTTTTTCCTTTTTTTTTTGCTGG................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................TCCTTTTCTTTTTGCGC......................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTCCTG................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CATTTTTTTCCTTTTTTTTTTGTCTG................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTCTG................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTCCTTTTTTTTTTGGTG.................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .....................ATTCCCCTTCTCTGAGCCA.................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTTGCT.................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTTCCTTTTTTTTTTGGTC.................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTATTG.................................................. | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..............................................................................................................................................................................TCATTTTTTTCCTTTTTTTTTAAG.................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TTCCTTTTTTTTTTGTCGGC................................................ | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TGGGTTGTGAAGGTGATCTG.................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .............................................................................................................................................................................ATCATTTTTTTCCTTTTTTTT........................................................ | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................ATTTTTTTCCTTTTTTTTTTG..................................................... | 21 | 8 | 0.25 | 0.25 | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................ATCATTTTTTTCCTTTTTT.......................................................... | 19 | 5 | 0.20 | 0.20 | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - |
| TTCAACAATCTGCTTCAAAATATTCCCCTTCTCTGAATCTAGAGCTGCACTGGCAACATTAGAGAAGTTTTTCCTTAAAAAAAAAATTAACAGTTGTCCTTTTCTTTTTGCCCCTTGACAGGATTACAGACTAGTTACATACAGTAAATGGGTTGTGAAGGTGATGTCCATCGATCATTTTTTTCCTTTTTTTTTTGTAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAATTTATGGACAATGAA .......................................................................................(((((((((((((..((............)).)))))....)))).))))..(((((.(((.(((....(((((((((........)))))))))..)))...))).)))))................................................... .................................................................................82....................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189784 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189787 | SRR040010(GSM532895) G529N. (cervix) | SRR037937(GSM510475) 293cand2. (cell line) | SRR189785 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....ACAATCTGCTTCAAAAATAG.................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...AACAATCTGCTTCAAAATAAG.................................................................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....ACAATCTGCTTCAAAAAAAA.................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...................................................................................................TTTTCTTTTTGCCCCAGGT.................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ....ACAATCTGCTTCAAAAATAA.................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .............................................................................AAAAAAAAATTAACAGTATTT........................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...........................................................................TAAAAAAAAAATTAACACATT.......................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ....ACAATCTGCTTCAAAAAAAG.................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |